RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 LRRC7Q96NW7 1537 aa16.4■□□□□ 0.22
PPP4R1-208ENST00000578178 NWD1Q149M9 1564 aa16.4■□□□□ 0.22
PPP4R1-208ENST00000578178 PPP1R15AO75807 674 aaPredicted RBP16.39■□□□□ 0.21
PPP4R1-208ENST00000578178 KIF1BO60333 1816 aa16.39■□□□□ 0.21
PPP4R1-208ENST00000578178 HDGFP51858 240 aaKnown RBP16.38■□□□□ 0.21
PPP4R1-208ENST00000578178 DIP2AQ14689 1571 aa16.38■□□□□ 0.21
PPP4R1-208ENST00000578178 UBAP1LF5GYI3 381 aa16.37■□□□□ 0.21
PPP4R1-208ENST00000578178 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.37■□□□□ 0.21
PPP4R1-208ENST00000578178 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
PPP4R1-208ENST00000578178 XIRP1Q702N8 1843 aaKnown RBP16.36■□□□□ 0.21
PPP4R1-208ENST00000578178 NKTRP30414 1462 aaKnown RBP16.35■□□□□ 0.21
PPP4R1-208ENST00000578178 SLC26A8Q96RN1 970 aa16.35■□□□□ 0.21
PPP4R1-208ENST00000578178 SETD5Q9C0A6 1442 aa16.35■□□□□ 0.21
PPP4R1-208ENST00000578178 BCANQ96GW7 911 aa16.34■□□□□ 0.21
PPP4R1-208ENST00000578178 NEXMIFQ5QGS0 1516 aa16.34■□□□□ 0.21
PPP4R1-208ENST00000578178 ALKQ9UM73 1620 aa16.34■□□□□ 0.21
PPP4R1-208ENST00000578178 CHD2O14647 1828 aaKnown RBP16.33■□□□□ 0.21
PPP4R1-208ENST00000578178 ADAMTS13Q76LX8 1427 aa16.33■□□□□ 0.2
PPP4R1-208ENST00000578178 SETBP1Q9Y6X0 1596 aa16.33■□□□□ 0.2
PPP4R1-208ENST00000578178 ACIN1Q9UKV3 1341 aaKnown RBP16.32■□□□□ 0.2
PPP4R1-208ENST00000578178 NRXN3Q9Y4C0 1643 aa16.32■□□□□ 0.2
PPP4R1-208ENST00000578178 TOM1O60784 492 aa16.31■□□□□ 0.2
PPP4R1-208ENST00000578178 KCNA6P17658 529 aa16.31■□□□□ 0.2
PPP4R1-208ENST00000578178 NUTM2DQ5VT03 806 aaPredicted RBP16.31■□□□□ 0.2
PPP4R1-208ENST00000578178 RAB3GAP2Q9H2M9 1393 aa16.3■□□□□ 0.2
PPP4R1-208ENST00000578178 ZNF326Q5BKZ1 582 aaKnown RBP16.3■□□□□ 0.2
PPP4R1-208ENST00000578178 SENP3Q9H4L4 574 aaPredicted RBP16.3■□□□□ 0.2
PPP4R1-208ENST00000578178 TMEM94Q12767 1356 aa16.28■□□□□ 0.2
PPP4R1-208ENST00000578178 PIK3R4Q99570 1358 aa16.28■□□□□ 0.2
PPP4R1-208ENST00000578178 MPHOSPH9Q99550 1183 aa16.28■□□□□ 0.2
PPP4R1-208ENST00000578178 TBX22Q9Y458 520 aa16.28■□□□□ 0.2
PPP4R1-208ENST00000578178 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
PPP4R1-208ENST00000578178 FOXD1Q16676 465 aa16.27■□□□□ 0.2
PPP4R1-208ENST00000578178 PPLO60437 1756 aa16.27■□□□□ 0.2
PPP4R1-208ENST00000578178 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
PPP4R1-208ENST00000578178 XRN1Q8IZH2 1706 aaKnown RBP16.25■□□□□ 0.19
PPP4R1-208ENST00000578178 PIP4K2BP78356 416 aa16.25■□□□□ 0.19
PPP4R1-208ENST00000578178 PROSER2Q86WR7 435 aaPredicted RBP16.24■□□□□ 0.19
PPP4R1-208ENST00000578178 SETD1AO15047 1707 aaKnown RBP16.22■□□□□ 0.19
PPP4R1-208ENST00000578178 IFT172Q9UG01 1749 aa16.22■□□□□ 0.19
PPP4R1-208ENST00000578178 PTPRUQ92729 1446 aa16.22■□□□□ 0.19
PPP4R1-208ENST00000578178 RPGRIP1LQ68CZ1 1315 aa16.21■□□□□ 0.19
PPP4R1-208ENST00000578178 SPATA31E1Q6ZUB1 1445 aa16.21■□□□□ 0.19
PPP4R1-208ENST00000578178 MSH6P52701 1360 aa16.21■□□□□ 0.19
PPP4R1-208ENST00000578178 NCOA3Q9Y6Q9 1424 aa16.2■□□□□ 0.18
PPP4R1-208ENST00000578178 RBM33Q96EV2 1170 aaKnown RBP16.19■□□□□ 0.18
PPP4R1-208ENST00000578178 METP08581 1390 aa16.18■□□□□ 0.18
PPP4R1-208ENST00000578178 VGFO15240 615 aaPredicted RBP16.18■□□□□ 0.18
PPP4R1-208ENST00000578178 HSPA1LP34931 641 aa16.18■□□□□ 0.18
PPP4R1-208ENST00000578178 AMOTL2Q9Y2J4 779 aa16.17■□□□□ 0.18
PPP4R1-208ENST00000578178 ROBO1Q9Y6N7 1651 aa16.17■□□□□ 0.18
PPP4R1-208ENST00000578178 HRCP23327 699 aa16.16■□□□□ 0.18
PPP4R1-208ENST00000578178 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.16■□□□□ 0.18
PPP4R1-208ENST00000578178 ANKRD30BQ9BXX2 1392 aa16.15■□□□□ 0.18
PPP4R1-208ENST00000578178 FAM135BQ49AJ0 1406 aa16.15■□□□□ 0.18
PPP4R1-208ENST00000578178 PRAG1Q86YV5 1406 aa16.14■□□□□ 0.17
PPP4R1-208ENST00000578178 PTCH1Q13635 1447 aa16.13■□□□□ 0.17
PPP4R1-208ENST00000578178 C14orf37Q86TY3 774 aa16.13■□□□□ 0.17
PPP4R1-208ENST00000578178 DCCP43146 1447 aa16.12■□□□□ 0.17
PPP4R1-208ENST00000578178 NALCNQ8IZF0 1738 aa16.12■□□□□ 0.17
PPP4R1-208ENST00000578178 RGL3Q3MIN7 710 aa16.12■□□□□ 0.17
PPP4R1-208ENST00000578178 PIK3C2GO75747 1445 aa16.11■□□□□ 0.17
PPP4R1-208ENST00000578178 MYOM2P54296 1465 aa16.11■□□□□ 0.17
PPP4R1-208ENST00000578178 C19orf44Q9H6X5 657 aa16.1■□□□□ 0.17
PPP4R1-208ENST00000578178 ADGRF5Q8IZF2 1346 aa16.1■□□□□ 0.17
PPP4R1-208ENST00000578178 DISP3Q9P2K9 1392 aa16.1■□□□□ 0.17
PPP4R1-208ENST00000578178 ADGRL3Q9HAR2 1447 aa16.1■□□□□ 0.17
PPP4R1-208ENST00000578178 MED1Q15648 1581 aaPredicted RBP16.09■□□□□ 0.17
PPP4R1-208ENST00000578178 LAMC1P11047 1609 aa16.09■□□□□ 0.17
PPP4R1-208ENST00000578178 NRXN1Q9ULB1 1477 aa16.09■□□□□ 0.17
PPP4R1-208ENST00000578178 ASXL1Q8IXJ9 1541 aa16.09■□□□□ 0.17
PPP4R1-208ENST00000578178 KNDC1Q76NI1 1749 aa16.08■□□□□ 0.17
PPP4R1-208ENST00000578178 CADPS2Q86UW7 1296 aa16.08■□□□□ 0.16
PPP4R1-208ENST00000578178 ATF3P18847 181 aa16.07■□□□□ 0.16
PPP4R1-208ENST00000578178 SLAIN2Q9P270 581 aa16.07■□□□□ 0.16
PPP4R1-208ENST00000578178 PHLPP1O60346 1717 aa16.06■□□□□ 0.16
PPP4R1-208ENST00000578178 ROBO2Q9HCK4 1378 aa16.06■□□□□ 0.16
PPP4R1-208ENST00000578178 TECPR2O15040 1411 aa16.05■□□□□ 0.16
PPP4R1-208ENST00000578178 AHDC1Q5TGY3 1603 aaPredicted RBP16.05■□□□□ 0.16
PPP4R1-208ENST00000578178 MST1RQ04912 1400 aa16.03■□□□□ 0.16
PPP4R1-208ENST00000578178 COL16A1Q07092 1604 aaPredicted RBP16.03■□□□□ 0.16
PPP4R1-208ENST00000578178 LRPPRCP42704 1394 aaKnown RBP16.02■□□□□ 0.16
PPP4R1-208ENST00000578178 CDC42BPGQ6DT37 1551 aa16.01■□□□□ 0.15
PPP4R1-208ENST00000578178 NHSL1Q5SYE7 1610 aa16■□□□□ 0.15
PPP4R1-208ENST00000578178 YTHDC2Q9H6S0 1430 aaKnown RBP16■□□□□ 0.15
PPP4R1-208ENST00000578178 ABCC11Q96J66 1382 aa16■□□□□ 0.15
PPP4R1-208ENST00000578178 BRINP3Q76B58 766 aa15.98■□□□□ 0.15
PPP4R1-208ENST00000578178 C14orf93Q9H972 538 aaKnown RBP15.98■□□□□ 0.15
PPP4R1-208ENST00000578178 TMEM132EQ6IEE7 984 aa15.97■□□□□ 0.15
PPP4R1-208ENST00000578178 ADGRB1O14514 1584 aa15.96■□□□□ 0.15
PPP4R1-208ENST00000578178 CFAP70Q5T0N1 1121 aa15.96■□□□□ 0.15
PPP4R1-208ENST00000578178 STK26Q9P289 416 aa15.96■□□□□ 0.15
PPP4R1-208ENST00000578178 DHX57Q6P158 1386 aaKnown RBP15.96■□□□□ 0.15
PPP4R1-208ENST00000578178 JCADQ9P266 1359 aa15.96■□□□□ 0.15
PPP4R1-208ENST00000578178 C1orf167Q5SNV9 1468 aa15.96■□□□□ 0.14
PPP4R1-208ENST00000578178 SHPRHQ149N8 1683 aa15.95■□□□□ 0.14
PPP4R1-208ENST00000578178 STAC3Q96MF2 364 aa15.95■□□□□ 0.14
PPP4R1-208ENST00000578178 DLC1Q96QB1 1528 aa15.94■□□□□ 0.14
PPP4R1-208ENST00000578178 DCAF11Q8TEB1 546 aa15.94■□□□□ 0.14
PPP4R1-208ENST00000578178 PLEKHH1Q9ULM0 1364 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms