RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 TNRQ92752 1358 aa26.14■■□□□ 1.78
PRKCA-203ENST00000578063 NEXMIFQ5QGS0 1516 aa26.13■■□□□ 1.77
PRKCA-203ENST00000578063 KIAA1210Q9ULL0 1709 aa26.12■■□□□ 1.77
PRKCA-203ENST00000578063 C3P01024 1663 aa26.1■■□□□ 1.77
PRKCA-203ENST00000578063 ADGRF5Q8IZF2 1346 aa26.1■■□□□ 1.77
PRKCA-203ENST00000578063 NBPF1Q3BBV0 1214 aa26.08■■□□□ 1.77
PRKCA-203ENST00000578063 ZFYVE9O95405 1425 aa26.08■■□□□ 1.77
PRKCA-203ENST00000578063 STAG3Q9UJ98 1225 aa26.08■■□□□ 1.76
PRKCA-203ENST00000578063 PIK3C2GO75747 1445 aa26.08■■□□□ 1.76
PRKCA-203ENST00000578063 VGFO15240 615 aaPredicted RBP26.07■■□□□ 1.76
PRKCA-203ENST00000578063 A2ML1A8K2U0 1454 aa26.07■■□□□ 1.76
PRKCA-203ENST00000578063 MYO5BQ9ULV0 1848 aa26.06■■□□□ 1.76
PRKCA-203ENST00000578063 NLRP1Q9C000 1473 aa26.05■■□□□ 1.76
PRKCA-203ENST00000578063 ADAMTSL3P82987 1691 aa26.05■■□□□ 1.76
PRKCA-203ENST00000578063 KDM5AP29375 1690 aaKnown RBP26.04■■□□□ 1.76
PRKCA-203ENST00000578063 CEBPAP49715 358 aaPredicted RBP26.01■■□□□ 1.75
PRKCA-203ENST00000578063 RIMS1Q86UR5 1692 aaKnown RBP26.01■■□□□ 1.75
PRKCA-203ENST00000578063 SETBP1Q9Y6X0 1596 aa26■■□□□ 1.75
PRKCA-203ENST00000578063 SCAF11Q99590 1463 aaKnown RBP25.99■■□□□ 1.75
PRKCA-203ENST00000578063 CFAP70Q5T0N1 1121 aa25.99■■□□□ 1.75
PRKCA-203ENST00000578063 IQGAP1P46940 1657 aa25.98■■□□□ 1.75
PRKCA-203ENST00000578063 PLPPR3Q6T4P5 718 aa25.98■■□□□ 1.75
PRKCA-203ENST00000578063 C14orf93Q9H972 538 aaKnown RBP25.97■■□□□ 1.75
PRKCA-203ENST00000578063 RIMS2Q9UQ26 1411 aa25.96■■□□□ 1.75
PRKCA-203ENST00000578063 WASHC2AQ641Q2 1341 aa25.96■■□□□ 1.75
PRKCA-203ENST00000578063 ST20-MTHFSA0A0A6YYL1 179 aa25.96■■□□□ 1.75
PRKCA-203ENST00000578063 UBR1Q8IWV7 1749 aa25.96■■□□□ 1.75
PRKCA-203ENST00000578063 POLR1AO95602 1720 aaPredicted RBP25.95■■□□□ 1.74
PRKCA-203ENST00000578063 CCDC7Q96M83 1385 aa25.94■■□□□ 1.74
PRKCA-203ENST00000578063 NUTM2DQ5VT03 806 aaPredicted RBP25.94■■□□□ 1.74
PRKCA-203ENST00000578063 EIF3AQ14152 1382 aaKnown RBP25.93■■□□□ 1.74
PRKCA-203ENST00000578063 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.92■■□□□ 1.74
PRKCA-203ENST00000578063 ADGRB1O14514 1584 aa25.91■■□□□ 1.74
PRKCA-203ENST00000578063 DDX10Q13206 875 aaKnown RBP25.91■■□□□ 1.74
PRKCA-203ENST00000578063 MYO3AQ8NEV4 1616 aa25.91■■□□□ 1.74
PRKCA-203ENST00000578063 HDGFP51858 240 aaKnown RBP25.9■■□□□ 1.74
PRKCA-203ENST00000578063 KIF7Q2M1P5 1343 aa25.9■■□□□ 1.74
PRKCA-203ENST00000578063 TMEM2Q9UHN6 1383 aa25.89■■□□□ 1.74
PRKCA-203ENST00000578063 C11orf95C9JLR9 678 aaPredicted RBP25.89■■□□□ 1.74
PRKCA-203ENST00000578063 TESK2Q96S53 571 aa25.84■■□□□ 1.73
PRKCA-203ENST00000578063 SLIT1O75093 1534 aa25.82■■□□□ 1.72
PRKCA-203ENST00000578063 CEP170BQ9Y4F5 1589 aaPredicted RBP25.82■■□□□ 1.72
PRKCA-203ENST00000578063 ALKQ9UM73 1620 aa25.82■■□□□ 1.72
PRKCA-203ENST00000578063 ARHGAP23Q9P227 1491 aa25.81■■□□□ 1.72
PRKCA-203ENST00000578063 ASXL1Q8IXJ9 1541 aa25.81■■□□□ 1.72
PRKCA-203ENST00000578063 PTPRMP28827 1452 aa25.8■■□□□ 1.72
PRKCA-203ENST00000578063 THEMISQ8N1K5 641 aaPredicted RBP25.8■■□□□ 1.72
PRKCA-203ENST00000578063 SLC24A1O60721 1099 aa25.79■■□□□ 1.72
PRKCA-203ENST00000578063 TMEM132EQ6IEE7 984 aa25.79■■□□□ 1.72
PRKCA-203ENST00000578063 TMF1P82094 1093 aa25.78■■□□□ 1.72
PRKCA-203ENST00000578063 ZNF142P52746 1687 aaPredicted RBP25.78■■□□□ 1.72
PRKCA-203ENST00000578063 NRXN3Q9Y4C0 1643 aa25.77■■□□□ 1.72
PRKCA-203ENST00000578063 SBNO2Q9Y2G9 1366 aa25.76■■□□□ 1.71
PRKCA-203ENST00000578063 MIER1Q8N108 512 aa25.75■■□□□ 1.71
PRKCA-203ENST00000578063 EID1Q9Y6B2 187 aa25.75■■□□□ 1.71
PRKCA-203ENST00000578063 PLEKHG1Q9ULL1 1385 aa25.75■■□□□ 1.71
PRKCA-203ENST00000578063 TRAK1Q9UPV9 953 aa25.74■■□□□ 1.71
PRKCA-203ENST00000578063 DISP3Q9P2K9 1392 aa25.74■■□□□ 1.71
PRKCA-203ENST00000578063 SETD1AO15047 1707 aaKnown RBP25.74■■□□□ 1.71
PRKCA-203ENST00000578063 CENPJQ9HC77 1338 aaPredicted RBP25.74■■□□□ 1.71
PRKCA-203ENST00000578063 YTHDC2Q9H6S0 1430 aaKnown RBP25.73■■□□□ 1.71
PRKCA-203ENST00000578063 SETD1BQ9UPS6 1966 aaKnown RBP25.72■■□□□ 1.71
PRKCA-203ENST00000578063 POLR3GLQ9BT43 218 aa25.72■■□□□ 1.71
PRKCA-203ENST00000578063 SENP3Q9H4L4 574 aaPredicted RBP25.72■■□□□ 1.71
PRKCA-203ENST00000578063 ARHGEF28Q8N1W1 1705 aaKnown RBP25.72■■□□□ 1.71
PRKCA-203ENST00000578063 TXNDC2Q86VQ3 553 aa25.71■■□□□ 1.71
PRKCA-203ENST00000578063 CDCA8Q53HL2 280 aa25.71■■□□□ 1.71
PRKCA-203ENST00000578063 LTKP29376 864 aa25.7■■□□□ 1.7
PRKCA-203ENST00000578063 QRICH2Q9H0J4 1663 aa25.68■■□□□ 1.7
PRKCA-203ENST00000578063 LRPPRCP42704 1394 aaKnown RBP25.67■■□□□ 1.7
PRKCA-203ENST00000578063 DLC1Q96QB1 1528 aa25.66■■□□□ 1.7
PRKCA-203ENST00000578063 ADAMTS13Q76LX8 1427 aa25.66■■□□□ 1.7
PRKCA-203ENST00000578063 BCANQ96GW7 911 aa25.66■■□□□ 1.7
PRKCA-203ENST00000578063 ANP32CO43423 234 aa25.65■■□□□ 1.7
PRKCA-203ENST00000578063 STK26Q9P289 416 aa25.64■■□□□ 1.7
PRKCA-203ENST00000578063 ABCC11Q96J66 1382 aa25.63■■□□□ 1.69
PRKCA-203ENST00000578063 DIP2AQ14689 1571 aa25.63■■□□□ 1.69
PRKCA-203ENST00000578063 MED14O60244 1454 aa25.63■■□□□ 1.69
PRKCA-203ENST00000578063 METP08581 1390 aa25.63■■□□□ 1.69
PRKCA-203ENST00000578063 KNDC1Q76NI1 1749 aa25.59■■□□□ 1.69
PRKCA-203ENST00000578063 TECPR2O15040 1411 aa25.59■■□□□ 1.69
PRKCA-203ENST00000578063 ANKLE2Q86XL3 938 aa25.57■■□□□ 1.68
PRKCA-203ENST00000578063 PRAM1Q96QH2 718 aa25.57■■□□□ 1.68
PRKCA-203ENST00000578063 POGKQ9P215 609 aa25.57■■□□□ 1.68
PRKCA-203ENST00000578063 KDM4FA0A1W2PPD8 638 aa25.56■■□□□ 1.68
PRKCA-203ENST00000578063 TBX22Q9Y458 520 aa25.56■■□□□ 1.68
PRKCA-203ENST00000578063 CPS1P31327 1500 aa25.56■■□□□ 1.68
PRKCA-203ENST00000578063 FAM135BQ49AJ0 1406 aa25.55■■□□□ 1.68
PRKCA-203ENST00000578063 SIRT1Q96EB6 747 aa25.54■■□□□ 1.68
PRKCA-203ENST00000578063 EVC2Q86UK5 1308 aa25.54■■□□□ 1.68
PRKCA-203ENST00000578063 PUS7Q96PZ0 661 aaKnown RBP25.54■■□□□ 1.68
PRKCA-203ENST00000578063 TULP4Q9NRJ4 1543 aa25.53■■□□□ 1.68
PRKCA-203ENST00000578063 SLC26A8Q96RN1 970 aa25.51■■□□□ 1.68
PRKCA-203ENST00000578063 MYOM1P52179 1685 aa25.51■■□□□ 1.67
PRKCA-203ENST00000578063 SAFB2Q14151 953 aaKnown RBP eCLIP25.5■■□□□ 1.675e-7■■■□□ 15.7
PRKCA-203ENST00000578063 PIK3R4Q99570 1358 aa25.49■■□□□ 1.67
PRKCA-203ENST00000578063 CCER2I3L3R5 266 aa25.49■■□□□ 1.67
PRKCA-203ENST00000578063 PRKRIP1Q9H875 184 aaPredicted RBP25.46■■□□□ 1.67
PRKCA-203ENST00000578063 PANK3Q9H999 370 aa25.46■■□□□ 1.67
PRKCA-203ENST00000578063 PLEKHH1Q9ULM0 1364 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms