RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 MEX3CQ5U5Q3 659 aaKnown RBP19.15■□□□□ 0.66
PRPF8-208ENST00000573716 LOC105371045A0A1W2PR82 267 aa19.14■□□□□ 0.65
PRPF8-208ENST00000573716 C14orf37Q86TY3 774 aa19.14■□□□□ 0.65
PRPF8-208ENST00000573716 LMTK2Q8IWU2 1503 aa19.14■□□□□ 0.65
PRPF8-208ENST00000573716 MYO5BQ9ULV0 1848 aa19.14■□□□□ 0.65
PRPF8-208ENST00000573716 ANKRD30AQ9BXX3 1397 aa19.13■□□□□ 0.65
PRPF8-208ENST00000573716 TRIM52Q96A61 297 aa19.12■□□□□ 0.65
PRPF8-208ENST00000573716 CHD2O14647 1828 aaKnown RBP19.11■□□□□ 0.65
PRPF8-208ENST00000573716 NOS1P29475 1434 aa19.11■□□□□ 0.65
PRPF8-208ENST00000573716 COL16A1Q07092 1604 aaPredicted RBP19.11■□□□□ 0.65
PRPF8-208ENST00000573716 APLP2Q06481 763 aa19.1■□□□□ 0.65
PRPF8-208ENST00000573716 SLC52A1Q9NWF4 448 aa19.1■□□□□ 0.65
PRPF8-208ENST00000573716 GCC2Q8IWJ2 1684 aa19.09■□□□□ 0.65
PRPF8-208ENST00000573716 LRP6O75581 1613 aa19.08■□□□□ 0.65
PRPF8-208ENST00000573716 FGD6Q6ZV73 1430 aa19.08■□□□□ 0.64
PRPF8-208ENST00000573716 RIMS2Q9UQ26 1411 aa19.08■□□□□ 0.64
PRPF8-208ENST00000573716 PLEKHG1Q9ULL1 1385 aa19.07■□□□□ 0.64
PRPF8-208ENST00000573716 CHGAP10645 457 aaKnown RBP19.07■□□□□ 0.64
PRPF8-208ENST00000573716 ZNF772Q68DY9 489 aaPredicted RBP19.06■□□□□ 0.64
PRPF8-208ENST00000573716 SPATA31A6Q5VVP1 1343 aa19.05■□□□□ 0.64
PRPF8-208ENST00000573716 HDGFP51858 240 aaKnown RBP19.05■□□□□ 0.64
PRPF8-208ENST00000573716 UPF1Q92900 1129 aaKnown RBP eCLIP19.05■□□□□ 0.64
PRPF8-208ENST00000573716 ZFYVE9O95405 1425 aa19.05■□□□□ 0.64
PRPF8-208ENST00000573716 NUTM2DQ5VT03 806 aaPredicted RBP19.04■□□□□ 0.64
PRPF8-208ENST00000573716 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.03■□□□□ 0.64
PRPF8-208ENST00000573716 NUTM2BA6NNL0 878 aaPredicted RBP19.03■□□□□ 0.64
PRPF8-208ENST00000573716 NUTM2EB1AL46 878 aaPredicted RBP19.03■□□□□ 0.64
PRPF8-208ENST00000573716 ATF3P18847 181 aa19.03■□□□□ 0.64
PRPF8-208ENST00000573716 NUTM2AQ8IVF1 878 aaPredicted RBP19.03■□□□□ 0.64
PRPF8-208ENST00000573716 TMEM131LA2VDJ0 1609 aa19.02■□□□□ 0.64
PRPF8-208ENST00000573716 SHPRHQ149N8 1683 aa19.01■□□□□ 0.63
PRPF8-208ENST00000573716 CADPS2Q86UW7 1296 aa19.01■□□□□ 0.63
PRPF8-208ENST00000573716 TBX22Q9Y458 520 aa19.01■□□□□ 0.63
PRPF8-208ENST00000573716 RPRD2Q5VT52 1461 aaKnown RBP19.01■□□□□ 0.63
PRPF8-208ENST00000573716 RXRBP28702 533 aa19■□□□□ 0.63
PRPF8-208ENST00000573716 AHDC1Q5TGY3 1603 aaPredicted RBP19■□□□□ 0.63
PRPF8-208ENST00000573716 FAM50AQ14320 339 aaKnown RBP18.99■□□□□ 0.63
PRPF8-208ENST00000573716 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.99■□□□□ 0.63
PRPF8-208ENST00000573716 C19orf44Q9H6X5 657 aa18.98■□□□□ 0.63
PRPF8-208ENST00000573716 NCOA3Q9Y6Q9 1424 aa18.98■□□□□ 0.63
PRPF8-208ENST00000573716 ANKRD50Q9ULJ7 1429 aa18.97■□□□□ 0.63
PRPF8-208ENST00000573716 ADGRL2O95490 1459 aa18.97■□□□□ 0.63
PRPF8-208ENST00000573716 DIP2AQ14689 1571 aa18.95■□□□□ 0.62
PRPF8-208ENST00000573716 ADAMTS13Q76LX8 1427 aa18.95■□□□□ 0.62
PRPF8-208ENST00000573716 BRINP3Q76B58 766 aa18.94■□□□□ 0.62
PRPF8-208ENST00000573716 AFF2P51816 1311 aa18.94■□□□□ 0.62
PRPF8-208ENST00000573716 TRPM2O94759 1503 aa18.92■□□□□ 0.62
PRPF8-208ENST00000573716 AMOTL2Q9Y2J4 779 aa18.92■□□□□ 0.62
PRPF8-208ENST00000573716 E9PCH4 1651 aa18.92■□□□□ 0.62
PRPF8-208ENST00000573716 PIK3R4Q99570 1358 aa18.91■□□□□ 0.62
PRPF8-208ENST00000573716 CDK12Q9NYV4 1490 aaPredicted RBP18.89■□□□□ 0.61
PRPF8-208ENST00000573716 ASXL1Q8IXJ9 1541 aa18.89■□□□□ 0.61
PRPF8-208ENST00000573716 UNC13BO14795 1591 aa18.89■□□□□ 0.61
PRPF8-208ENST00000573716 C8orf37Q96NL8 207 aa18.88■□□□□ 0.61
PRPF8-208ENST00000573716 PTPRUQ92729 1446 aa18.88■□□□□ 0.61
PRPF8-208ENST00000573716 QTRT2Q9H974 415 aaKnown RBP18.85■□□□□ 0.61
PRPF8-208ENST00000573716 NHSL1Q5SYE7 1610 aa18.85■□□□□ 0.61
PRPF8-208ENST00000573716 DDX17Q92841 729 aaKnown RBP18.84■□□□□ 0.61
PRPF8-208ENST00000573716 RGS12O14924 1447 aa18.83■□□□□ 0.61
PRPF8-208ENST00000573716 DCCP43146 1447 aa18.83■□□□□ 0.61
PRPF8-208ENST00000573716 SETD5Q9C0A6 1442 aa18.83■□□□□ 0.61
PRPF8-208ENST00000573716 LRRC59Q96AG4 307 aaKnown RBP18.83■□□□□ 0.6
PRPF8-208ENST00000573716 XRN1Q8IZH2 1706 aaKnown RBP18.83■□□□□ 0.6
PRPF8-208ENST00000573716 MST1RQ04912 1400 aa18.83■□□□□ 0.6
PRPF8-208ENST00000573716 IQGAP3Q86VI3 1631 aa18.82■□□□□ 0.6
PRPF8-208ENST00000573716 RBM6P78332 1123 aaKnown RBP18.82■□□□□ 0.6
PRPF8-208ENST00000573716 ADAMTS2O95450 1211 aa18.81■□□□□ 0.6
PRPF8-208ENST00000573716 ZNF326Q5BKZ1 582 aaKnown RBP18.81■□□□□ 0.6
PRPF8-208ENST00000573716 NGLY1Q96IV0 654 aa18.8■□□□□ 0.6
PRPF8-208ENST00000573716 NRXN3Q9Y4C0 1643 aa18.8■□□□□ 0.6
PRPF8-208ENST00000573716 NUP155O75694 1391 aa18.8■□□□□ 0.6
PRPF8-208ENST00000573716 PNPLA6Q8IY17 1366 aa18.8■□□□□ 0.6
PRPF8-208ENST00000573716 NALCNQ8IZF0 1738 aa18.77■□□□□ 0.59
PRPF8-208ENST00000573716 SETBP1Q9Y6X0 1596 aa18.76■□□□□ 0.59
PRPF8-208ENST00000573716 FOXD1Q16676 465 aa18.76■□□□□ 0.59
PRPF8-208ENST00000573716 METP08581 1390 aa18.76■□□□□ 0.59
PRPF8-208ENST00000573716 ADGRL3Q9HAR2 1447 aa18.75■□□□□ 0.59
PRPF8-208ENST00000573716 ITGAEP38570 1179 aa18.75■□□□□ 0.59
PRPF8-208ENST00000573716 SPHKAPQ2M3C7 1700 aa18.74■□□□□ 0.59
PRPF8-208ENST00000573716 ATAD2Q6PL18 1390 aa18.73■□□□□ 0.59
PRPF8-208ENST00000573716 ROCK1Q13464 1354 aa18.71■□□□□ 0.59
PRPF8-208ENST00000573716 USP21Q9UK80 565 aa18.71■□□□□ 0.59
PRPF8-208ENST00000573716 C1orf167Q5SNV9 1468 aa18.69■□□□□ 0.58
PRPF8-208ENST00000573716 ZRANB1Q9UGI0 708 aa18.68■□□□□ 0.58
PRPF8-208ENST00000573716 TRPC5Q9UL62 973 aaPredicted RBP18.68■□□□□ 0.58
PRPF8-208ENST00000573716 ORAI2Q96SN7 254 aa18.67■□□□□ 0.58
PRPF8-208ENST00000573716 NEXMIFQ5QGS0 1516 aa18.65■□□□□ 0.58
PRPF8-208ENST00000573716 CLTCL1P53675 1640 aa18.65■□□□□ 0.58
PRPF8-208ENST00000573716 KIF1BO60333 1816 aa18.64■□□□□ 0.57
PRPF8-208ENST00000573716 SOS2Q07890 1332 aaPredicted RBP18.63■□□□□ 0.57
PRPF8-208ENST00000573716 PTCH1Q13635 1447 aa18.63■□□□□ 0.57
PRPF8-208ENST00000573716 LAMC1P11047 1609 aa18.63■□□□□ 0.57
PRPF8-208ENST00000573716 SRCAPQ6ZRS2 3230 aa18.62■□□□□ 0.57
PRPF8-208ENST00000573716 ATRNO75882 1429 aa18.61■□□□□ 0.57
PRPF8-208ENST00000573716 ROBO2Q9HCK4 1378 aa18.61■□□□□ 0.57
PRPF8-208ENST00000573716 FNBP4Q8N3X1 1017 aaPredicted RBP18.6■□□□□ 0.57
PRPF8-208ENST00000573716 COL22A1Q8NFW1 1626 aaPredicted RBP18.58■□□□□ 0.56
PRPF8-208ENST00000573716 XPCQ01831 940 aaPredicted RBP18.57■□□□□ 0.56
PRPF8-208ENST00000573716 ESCO1Q5FWF5 840 aa18.57■□□□□ 0.56
PRPF8-208ENST00000573716 MARF1Q9Y4F3 1742 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms