RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 MYO5BQ9ULV0 1848 aa19.16■□□□□ 0.66
NPLOC4-213ENST00000573519 RIMS2Q9UQ26 1411 aa19.16■□□□□ 0.66
NPLOC4-213ENST00000573519 HDGFP51858 240 aaKnown RBP19.15■□□□□ 0.66
NPLOC4-213ENST00000573519 TRIM52Q96A61 297 aa19.14■□□□□ 0.65
NPLOC4-213ENST00000573519 ZFYVE9O95405 1425 aa19.14■□□□□ 0.65
NPLOC4-213ENST00000573519 NUTM2DQ5VT03 806 aaPredicted RBP19.13■□□□□ 0.65
NPLOC4-213ENST00000573519 HFM1A2PYH4 1435 aa19.13■□□□□ 0.65
NPLOC4-213ENST00000573519 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.11■□□□□ 0.65
NPLOC4-213ENST00000573519 SPHKAPQ2M3C7 1700 aa19.11■□□□□ 0.65
NPLOC4-213ENST00000573519 PLEKHG1Q9ULL1 1385 aa19.1■□□□□ 0.65
NPLOC4-213ENST00000573519 KCNA6P17658 529 aa19.09■□□□□ 0.65
NPLOC4-213ENST00000573519 DISP3Q9P2K9 1392 aa19.07■□□□□ 0.64
NPLOC4-213ENST00000573519 HSPA1LP34931 641 aa19.07■□□□□ 0.64
NPLOC4-213ENST00000573519 ZNF326Q5BKZ1 582 aaKnown RBP19.07■□□□□ 0.64
NPLOC4-213ENST00000573519 ALKQ9UM73 1620 aa19.07■□□□□ 0.64
NPLOC4-213ENST00000573519 PROSER2Q86WR7 435 aaPredicted RBP19.06■□□□□ 0.64
NPLOC4-213ENST00000573519 RBM33Q96EV2 1170 aaKnown RBP19.06■□□□□ 0.64
NPLOC4-213ENST00000573519 TMEM94Q12767 1356 aa19.06■□□□□ 0.64
NPLOC4-213ENST00000573519 SLC4A1APQ9BWU0 796 aaKnown RBP19.04■□□□□ 0.64
NPLOC4-213ENST00000573519 NWD1Q149M9 1564 aa19.03■□□□□ 0.64
NPLOC4-213ENST00000573519 XIRP1Q702N8 1843 aaKnown RBP19.03■□□□□ 0.64
NPLOC4-213ENST00000573519 TRPM2O94759 1503 aa19.03■□□□□ 0.64
NPLOC4-213ENST00000573519 CLTCL1P53675 1640 aa19.03■□□□□ 0.64
NPLOC4-213ENST00000573519 NKTRP30414 1462 aaKnown RBP19.02■□□□□ 0.63
NPLOC4-213ENST00000573519 TBX22Q9Y458 520 aa19.01■□□□□ 0.63
NPLOC4-213ENST00000573519 ADAMTS13Q76LX8 1427 aa19■□□□□ 0.63
NPLOC4-213ENST00000573519 DIP2AQ14689 1571 aa18.98■□□□□ 0.63
NPLOC4-213ENST00000573519 CHD2O14647 1828 aaKnown RBP18.97■□□□□ 0.63
NPLOC4-213ENST00000573519 FOXD1Q16676 465 aa18.97■□□□□ 0.63
NPLOC4-213ENST00000573519 MSH6P52701 1360 aa18.96■□□□□ 0.63
NPLOC4-213ENST00000573519 C14orf37Q86TY3 774 aa18.96■□□□□ 0.63
NPLOC4-213ENST00000573519 KIF1BO60333 1816 aa18.95■□□□□ 0.62
NPLOC4-213ENST00000573519 PIK3R4Q99570 1358 aa18.93■□□□□ 0.62
NPLOC4-213ENST00000573519 NEXMIFQ5QGS0 1516 aa18.93■□□□□ 0.62
NPLOC4-213ENST00000573519 AMOTL2Q9Y2J4 779 aa18.92■□□□□ 0.62
NPLOC4-213ENST00000573519 SETBP1Q9Y6X0 1596 aa18.92■□□□□ 0.62
NPLOC4-213ENST00000573519 NRXN3Q9Y4C0 1643 aa18.92■□□□□ 0.62
NPLOC4-213ENST00000573519 MPHOSPH9Q99550 1183 aa18.91■□□□□ 0.62
NPLOC4-213ENST00000573519 PTPRUQ92729 1446 aa18.9■□□□□ 0.62
NPLOC4-213ENST00000573519 SETD5Q9C0A6 1442 aa18.9■□□□□ 0.62
NPLOC4-213ENST00000573519 ILDR2Q71H61 639 aa18.89■□□□□ 0.61
NPLOC4-213ENST00000573519 FAM135BQ49AJ0 1406 aa18.89■□□□□ 0.61
NPLOC4-213ENST00000573519 CCDC144AA2RUR9 1427 aa18.88■□□□□ 0.61
NPLOC4-213ENST00000573519 MED1Q15648 1581 aaPredicted RBP18.88■□□□□ 0.61
NPLOC4-213ENST00000573519 ROBO1Q9Y6N7 1651 aa18.88■□□□□ 0.61
NPLOC4-213ENST00000573519 VGFO15240 615 aaPredicted RBP18.87■□□□□ 0.61
NPLOC4-213ENST00000573519 METP08581 1390 aa18.87■□□□□ 0.61
NPLOC4-213ENST00000573519 SLAIN2Q9P270 581 aa18.87■□□□□ 0.61
NPLOC4-213ENST00000573519 NCOA3Q9Y6Q9 1424 aa18.86■□□□□ 0.61
NPLOC4-213ENST00000573519 RPGRIP1LQ68CZ1 1315 aa18.85■□□□□ 0.61
NPLOC4-213ENST00000573519 RAB3GAP2Q9H2M9 1393 aa18.84■□□□□ 0.61
NPLOC4-213ENST00000573519 ACIN1Q9UKV3 1341 aaKnown RBP18.84■□□□□ 0.61
NPLOC4-213ENST00000573519 ATF3P18847 181 aa18.84■□□□□ 0.61
NPLOC4-213ENST00000573519 C19orf44Q9H6X5 657 aa18.84■□□□□ 0.61
NPLOC4-213ENST00000573519 XRN1Q8IZH2 1706 aaKnown RBP18.83■□□□□ 0.61
NPLOC4-213ENST00000573519 RGL3Q3MIN7 710 aa18.83■□□□□ 0.6
NPLOC4-213ENST00000573519 CADPS2Q86UW7 1296 aa18.82■□□□□ 0.6
NPLOC4-213ENST00000573519 PHF23Q9BUL5 403 aaPredicted RBP18.82■□□□□ 0.6
NPLOC4-213ENST00000573519 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.82■□□□□ 0.6
NPLOC4-213ENST00000573519 PPLO60437 1756 aa18.81■□□□□ 0.6
NPLOC4-213ENST00000573519 PHLPP1O60346 1717 aa18.77■□□□□ 0.59
NPLOC4-213ENST00000573519 SPATA31E1Q6ZUB1 1445 aa18.76■□□□□ 0.59
NPLOC4-213ENST00000573519 ADGRF5Q8IZF2 1346 aa18.75■□□□□ 0.59
NPLOC4-213ENST00000573519 SETD1AO15047 1707 aaKnown RBP18.75■□□□□ 0.59
NPLOC4-213ENST00000573519 DCCP43146 1447 aa18.74■□□□□ 0.59
NPLOC4-213ENST00000573519 ANKRD30BQ9BXX2 1392 aa18.74■□□□□ 0.59
NPLOC4-213ENST00000573519 ADGRL3Q9HAR2 1447 aa18.73■□□□□ 0.59
NPLOC4-213ENST00000573519 PTCH1Q13635 1447 aa18.72■□□□□ 0.59
NPLOC4-213ENST00000573519 NALCNQ8IZF0 1738 aa18.71■□□□□ 0.59
NPLOC4-213ENST00000573519 ROBO2Q9HCK4 1378 aa18.71■□□□□ 0.59
NPLOC4-213ENST00000573519 SOCS7O14512 581 aa18.71■□□□□ 0.59
NPLOC4-213ENST00000573519 BRINP3Q76B58 766 aa18.71■□□□□ 0.59
NPLOC4-213ENST00000573519 IFT172Q9UG01 1749 aa18.71■□□□□ 0.59
NPLOC4-213ENST00000573519 MST1RQ04912 1400 aa18.7■□□□□ 0.58
NPLOC4-213ENST00000573519 JCADQ9P266 1359 aa18.69■□□□□ 0.58
NPLOC4-213ENST00000573519 STK26Q9P289 416 aa18.69■□□□□ 0.58
NPLOC4-213ENST00000573519 COL16A1Q07092 1604 aaPredicted RBP18.69■□□□□ 0.58
NPLOC4-213ENST00000573519 ASXL1Q8IXJ9 1541 aa18.68■□□□□ 0.58
NPLOC4-213ENST00000573519 AHDC1Q5TGY3 1603 aaPredicted RBP18.67■□□□□ 0.58
NPLOC4-213ENST00000573519 PIK3C2GO75747 1445 aa18.66■□□□□ 0.58
NPLOC4-213ENST00000573519 TMEM132EQ6IEE7 984 aa18.66■□□□□ 0.58
NPLOC4-213ENST00000573519 PRAG1Q86YV5 1406 aa18.65■□□□□ 0.58
NPLOC4-213ENST00000573519 HRCP23327 699 aa18.64■□□□□ 0.57
NPLOC4-213ENST00000573519 DDX17Q92841 729 aaKnown RBP18.62■□□□□ 0.57
NPLOC4-213ENST00000573519 RGS17Q9UGC6 210 aaPredicted RBP18.62■□□□□ 0.57
NPLOC4-213ENST00000573519 LRPPRCP42704 1394 aaKnown RBP18.62■□□□□ 0.57
NPLOC4-213ENST00000573519 MYOM2P54296 1465 aa18.62■□□□□ 0.57
NPLOC4-213ENST00000573519 C1orf167Q5SNV9 1468 aa18.62■□□□□ 0.57
NPLOC4-213ENST00000573519 WAPLQ7Z5K2 1190 aa18.61■□□□□ 0.57
NPLOC4-213ENST00000573519 SPATA31A6Q5VVP1 1343 aa18.6■□□□□ 0.57
NPLOC4-213ENST00000573519 CFAP70Q5T0N1 1121 aa18.6■□□□□ 0.57
NPLOC4-213ENST00000573519 MEX3CQ5U5Q3 659 aaKnown RBP18.6■□□□□ 0.57
NPLOC4-213ENST00000573519 NHSL1Q5SYE7 1610 aa18.6■□□□□ 0.57
NPLOC4-213ENST00000573519 YTHDC2Q9H6S0 1430 aaKnown RBP18.59■□□□□ 0.57
NPLOC4-213ENST00000573519 C14orf93Q9H972 538 aaKnown RBP18.59■□□□□ 0.57
NPLOC4-213ENST00000573519 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
NPLOC4-213ENST00000573519 NRXN1Q9ULB1 1477 aa18.58■□□□□ 0.57
NPLOC4-213ENST00000573519 TECPR2O15040 1411 aa18.58■□□□□ 0.57
NPLOC4-213ENST00000573519 ABCC11Q96J66 1382 aa18.58■□□□□ 0.57
NPLOC4-213ENST00000573519 SHPRHQ149N8 1683 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms