RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 CHGAP10645 457 aaKnown RBP25.96■■□□□ 1.75
RPA1-203ENST00000571058 PLEKHG1Q9ULL1 1385 aa25.95■■□□□ 1.75
RPA1-203ENST00000571058 PPP1R15AO75807 674 aaPredicted RBP25.95■■□□□ 1.74
RPA1-203ENST00000571058 BCANQ96GW7 911 aa25.92■■□□□ 1.74
RPA1-203ENST00000571058 KCNA6P17658 529 aa25.91■■□□□ 1.74
RPA1-203ENST00000571058 TRIM52Q96A61 297 aa25.91■■□□□ 1.74
RPA1-203ENST00000571058 SLC26A8Q96RN1 970 aa25.91■■□□□ 1.74
RPA1-203ENST00000571058 ACIN1Q9UKV3 1341 aaKnown RBP25.88■■□□□ 1.73
RPA1-203ENST00000571058 TRPM2O94759 1503 aa25.88■■□□□ 1.73
RPA1-203ENST00000571058 NKTRP30414 1462 aaKnown RBP25.86■■□□□ 1.73
RPA1-203ENST00000571058 NWD1Q149M9 1564 aa25.86■■□□□ 1.73
RPA1-203ENST00000571058 SLC4A1APQ9BWU0 796 aaKnown RBP25.85■■□□□ 1.73
RPA1-203ENST00000571058 TBX22Q9Y458 520 aa25.85■■□□□ 1.73
RPA1-203ENST00000571058 DIP2AQ14689 1571 aa25.85■■□□□ 1.73
RPA1-203ENST00000571058 PIP4K2BP78356 416 aa25.84■■□□□ 1.73
RPA1-203ENST00000571058 SCAF1Q9H7N4 1312 aaKnown RBP25.84■■□□□ 1.73
RPA1-203ENST00000571058 XIRP1Q702N8 1843 aaKnown RBP25.81■■□□□ 1.72
RPA1-203ENST00000571058 CLTCL1P53675 1640 aa25.81■■□□□ 1.72
RPA1-203ENST00000571058 CHD2O14647 1828 aaKnown RBP25.81■■□□□ 1.72
RPA1-203ENST00000571058 PIK3R4Q99570 1358 aa25.81■■□□□ 1.72
RPA1-203ENST00000571058 ALKQ9UM73 1620 aa25.81■■□□□ 1.72
RPA1-203ENST00000571058 KIF1BO60333 1816 aa25.8■■□□□ 1.72
RPA1-203ENST00000571058 PROSER2Q86WR7 435 aaPredicted RBP25.8■■□□□ 1.72
RPA1-203ENST00000571058 TMEM94Q12767 1356 aa25.8■■□□□ 1.72
RPA1-203ENST00000571058 ZNF326Q5BKZ1 582 aaKnown RBP25.79■■□□□ 1.72
RPA1-203ENST00000571058 ADAMTS13Q76LX8 1427 aa25.79■■□□□ 1.72
RPA1-203ENST00000571058 NUTM2DQ5VT03 806 aaPredicted RBP25.77■■□□□ 1.72
RPA1-203ENST00000571058 SETBP1Q9Y6X0 1596 aa25.73■■□□□ 1.71
RPA1-203ENST00000571058 HSPA1LP34931 641 aa25.73■■□□□ 1.71
RPA1-203ENST00000571058 SENP3Q9H4L4 574 aaPredicted RBP25.73■■□□□ 1.71
RPA1-203ENST00000571058 SETD5Q9C0A6 1442 aa25.72■■□□□ 1.71
RPA1-203ENST00000571058 NCOA3Q9Y6Q9 1424 aa25.72■■□□□ 1.71
RPA1-203ENST00000571058 NEXMIFQ5QGS0 1516 aa25.71■■□□□ 1.71
RPA1-203ENST00000571058 MSH6P52701 1360 aa25.69■■□□□ 1.7
RPA1-203ENST00000571058 RPGRIP1LQ68CZ1 1315 aa25.69■■□□□ 1.7
RPA1-203ENST00000571058 MPHOSPH9Q99550 1183 aa25.69■■□□□ 1.7
RPA1-203ENST00000571058 DISP3Q9P2K9 1392 aa25.68■■□□□ 1.7
RPA1-203ENST00000571058 NRXN3Q9Y4C0 1643 aa25.67■■□□□ 1.7
RPA1-203ENST00000571058 VGFO15240 615 aaPredicted RBP25.67■■□□□ 1.7
RPA1-203ENST00000571058 FAM135BQ49AJ0 1406 aa25.66■■□□□ 1.7
RPA1-203ENST00000571058 CCDC144AA2RUR9 1427 aa25.65■■□□□ 1.7
RPA1-203ENST00000571058 RBM33Q96EV2 1170 aaKnown RBP25.63■■□□□ 1.69
RPA1-203ENST00000571058 AMOTL2Q9Y2J4 779 aa25.63■■□□□ 1.69
RPA1-203ENST00000571058 FOXD1Q16676 465 aa25.62■■□□□ 1.69
RPA1-203ENST00000571058 XRN1Q8IZH2 1706 aaKnown RBP25.6■■□□□ 1.69
RPA1-203ENST00000571058 RAB3GAP2Q9H2M9 1393 aa25.59■■□□□ 1.69
RPA1-203ENST00000571058 C14orf37Q86TY3 774 aa25.59■■□□□ 1.69
RPA1-203ENST00000571058 PTPRUQ92729 1446 aa25.59■■□□□ 1.69
RPA1-203ENST00000571058 PPLO60437 1756 aa25.59■■□□□ 1.69
RPA1-203ENST00000571058 C19orf44Q9H6X5 657 aa25.58■■□□□ 1.69
RPA1-203ENST00000571058 METP08581 1390 aa25.57■■□□□ 1.68
RPA1-203ENST00000571058 SLAIN2Q9P270 581 aa25.57■■□□□ 1.68
RPA1-203ENST00000571058 CADPS2Q86UW7 1296 aa25.56■■□□□ 1.68
RPA1-203ENST00000571058 ROBO1Q9Y6N7 1651 aa25.55■■□□□ 1.68
RPA1-203ENST00000571058 HRCP23327 699 aa25.55■■□□□ 1.68
RPA1-203ENST00000571058 SPATA31E1Q6ZUB1 1445 aa25.54■■□□□ 1.68
RPA1-203ENST00000571058 ATF3P18847 181 aa25.53■■□□□ 1.68
RPA1-203ENST00000571058 ANKRD30BQ9BXX2 1392 aa25.53■■□□□ 1.68
RPA1-203ENST00000571058 DCCP43146 1447 aa25.53■■□□□ 1.68
RPA1-203ENST00000571058 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.52■■□□□ 1.68
RPA1-203ENST00000571058 MED1Q15648 1581 aaPredicted RBP25.5■■□□□ 1.67
RPA1-203ENST00000571058 SETD1AO15047 1707 aaKnown RBP25.49■■□□□ 1.67
RPA1-203ENST00000571058 PRAG1Q86YV5 1406 aa25.47■■□□□ 1.67
RPA1-203ENST00000571058 IFT172Q9UG01 1749 aa25.47■■□□□ 1.67
RPA1-203ENST00000571058 RGL3Q3MIN7 710 aa25.47■■□□□ 1.67
RPA1-203ENST00000571058 PTCH1Q13635 1447 aa25.46■■□□□ 1.67
RPA1-203ENST00000571058 ADGRL3Q9HAR2 1447 aa25.44■■□□□ 1.66
RPA1-203ENST00000571058 ADGRF5Q8IZF2 1346 aa25.41■■□□□ 1.66
RPA1-203ENST00000571058 PHLPP1O60346 1717 aa25.4■■□□□ 1.66
RPA1-203ENST00000571058 PIK3C2GO75747 1445 aa25.38■■□□□ 1.65
RPA1-203ENST00000571058 ILDR2Q71H61 639 aa25.38■■□□□ 1.65
RPA1-203ENST00000571058 ROBO2Q9HCK4 1378 aa25.37■■□□□ 1.65
RPA1-203ENST00000571058 NALCNQ8IZF0 1738 aa25.37■■□□□ 1.65
RPA1-203ENST00000571058 PHF23Q9BUL5 403 aaPredicted RBP25.36■■□□□ 1.65
RPA1-203ENST00000571058 AHDC1Q5TGY3 1603 aaPredicted RBP25.36■■□□□ 1.65
RPA1-203ENST00000571058 MST1RQ04912 1400 aa25.36■■□□□ 1.65
RPA1-203ENST00000571058 MYOM2P54296 1465 aa25.35■■□□□ 1.65
RPA1-203ENST00000571058 JCADQ9P266 1359 aa25.33■■□□□ 1.65
RPA1-203ENST00000571058 BRINP3Q76B58 766 aa25.33■■□□□ 1.65
RPA1-203ENST00000571058 COL16A1Q07092 1604 aaPredicted RBP25.33■■□□□ 1.65
RPA1-203ENST00000571058 NRXN1Q9ULB1 1477 aa25.33■■□□□ 1.65
RPA1-203ENST00000571058 TECPR2O15040 1411 aa25.32■■□□□ 1.64
RPA1-203ENST00000571058 LRPPRCP42704 1394 aaKnown RBP25.31■■□□□ 1.64
RPA1-203ENST00000571058 LAMC1P11047 1609 aa25.31■■□□□ 1.64
RPA1-203ENST00000571058 ABCC11Q96J66 1382 aa25.31■■□□□ 1.64
RPA1-203ENST00000571058 STAC3Q96MF2 364 aa25.3■■□□□ 1.64
RPA1-203ENST00000571058 ASXL1Q8IXJ9 1541 aa25.3■■□□□ 1.64
RPA1-203ENST00000571058 C14orf93Q9H972 538 aaKnown RBP25.29■■□□□ 1.64
RPA1-203ENST00000571058 KNDC1Q76NI1 1749 aa25.29■■□□□ 1.64
RPA1-203ENST00000571058 SOCS7O14512 581 aa25.26■■□□□ 1.63
RPA1-203ENST00000571058 YTHDC2Q9H6S0 1430 aaKnown RBP25.25■■□□□ 1.63
RPA1-203ENST00000571058 C1orf167Q5SNV9 1468 aa25.25■■□□□ 1.63
RPA1-203ENST00000571058 NHSL1Q5SYE7 1610 aa25.24■■□□□ 1.63
RPA1-203ENST00000571058 CDC42BPGQ6DT37 1551 aa25.24■■□□□ 1.63
RPA1-203ENST00000571058 SPATA31A6Q5VVP1 1343 aa25.24■■□□□ 1.63
RPA1-203ENST00000571058 TMEM132EQ6IEE7 984 aa25.24■■□□□ 1.63
RPA1-203ENST00000571058 SIRT1Q96EB6 747 aa25.24■■□□□ 1.63
RPA1-203ENST00000571058 STK26Q9P289 416 aa25.24■■□□□ 1.63
RPA1-203ENST00000571058 DHX57Q6P158 1386 aaKnown RBP25.23■■□□□ 1.63
RPA1-203ENST00000571058 SHPRHQ149N8 1683 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms