RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 MYOM3Q5VTT5 1437 aa16.68■□□□□ 0.26
CTDNEP1-202ENST00000570380 RXRBP28702 533 aa16.67■□□□□ 0.26
CTDNEP1-202ENST00000570380 RRP7BPQ9NSQ0 103 aa16.67■□□□□ 0.26
CTDNEP1-202ENST00000570380 AHDC1Q5TGY3 1603 aaPredicted RBP16.67■□□□□ 0.26
CTDNEP1-202ENST00000570380 SRCAPQ6ZRS2 3230 aa16.66■□□□□ 0.26
CTDNEP1-202ENST00000570380 LMTK2Q8IWU2 1503 aa16.66■□□□□ 0.26
CTDNEP1-202ENST00000570380 BCANQ96GW7 911 aa16.66■□□□□ 0.26
CTDNEP1-202ENST00000570380 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.66■□□□□ 0.26
CTDNEP1-202ENST00000570380 KANK1Q14678 1352 aa16.65■□□□□ 0.26
CTDNEP1-202ENST00000570380 NOS1P29475 1434 aa16.65■□□□□ 0.26
CTDNEP1-202ENST00000570380 CDK12Q9NYV4 1490 aaPredicted RBP16.65■□□□□ 0.26
CTDNEP1-202ENST00000570380 ABCC5O15440 1437 aa16.63■□□□□ 0.25
CTDNEP1-202ENST00000570380 DIP2AQ14689 1571 aa16.63■□□□□ 0.25
CTDNEP1-202ENST00000570380 ZFYVE9O95405 1425 aa16.62■□□□□ 0.25
CTDNEP1-202ENST00000570380 NCOA3Q9Y6Q9 1424 aa16.62■□□□□ 0.25
CTDNEP1-202ENST00000570380 KANK4Q5T7N3 995 aaPredicted RBP16.61■□□□□ 0.25
CTDNEP1-202ENST00000570380 GCC2Q8IWJ2 1684 aa16.61■□□□□ 0.25
CTDNEP1-202ENST00000570380 PLEKHG1Q9ULL1 1385 aa16.61■□□□□ 0.25
CTDNEP1-202ENST00000570380 SLC52A1Q9NWF4 448 aa16.6■□□□□ 0.25
CTDNEP1-202ENST00000570380 NUTM2BA6NNL0 878 aaPredicted RBP16.59■□□□□ 0.25
CTDNEP1-202ENST00000570380 NUTM2EB1AL46 878 aaPredicted RBP16.59■□□□□ 0.25
CTDNEP1-202ENST00000570380 NUTM2AQ8IVF1 878 aaPredicted RBP16.59■□□□□ 0.25
CTDNEP1-202ENST00000570380 C14orf37Q86TY3 774 aa16.58■□□□□ 0.24
CTDNEP1-202ENST00000570380 CADPS2Q86UW7 1296 aa16.58■□□□□ 0.24
CTDNEP1-202ENST00000570380 AFF2P51816 1311 aa16.58■□□□□ 0.24
CTDNEP1-202ENST00000570380 TMEM131LA2VDJ0 1609 aa16.57■□□□□ 0.24
CTDNEP1-202ENST00000570380 PTPN23Q9H3S7 1636 aa16.57■□□□□ 0.24
CTDNEP1-202ENST00000570380 RIMS2Q9UQ26 1411 aa16.57■□□□□ 0.24
CTDNEP1-202ENST00000570380 C19orf44Q9H6X5 657 aa16.57■□□□□ 0.24
CTDNEP1-202ENST00000570380 TBX22Q9Y458 520 aa16.57■□□□□ 0.24
CTDNEP1-202ENST00000570380 DAPK1P53355 1430 aa16.56■□□□□ 0.24
CTDNEP1-202ENST00000570380 ATF3P18847 181 aa16.56■□□□□ 0.24
CTDNEP1-202ENST00000570380 RGS12O14924 1447 aa16.55■□□□□ 0.24
CTDNEP1-202ENST00000570380 PPP1R15AO75807 674 aaPredicted RBP16.55■□□□□ 0.24
CTDNEP1-202ENST00000570380 BRINP3Q76B58 766 aa16.55■□□□□ 0.24
CTDNEP1-202ENST00000570380 VPS8Q8N3P4 1428 aa16.54■□□□□ 0.24
CTDNEP1-202ENST00000570380 ADAMTS13Q76LX8 1427 aa16.53■□□□□ 0.24
CTDNEP1-202ENST00000570380 NHSL1Q5SYE7 1610 aa16.53■□□□□ 0.24
CTDNEP1-202ENST00000570380 HDGFP51858 240 aaKnown RBP16.52■□□□□ 0.24
CTDNEP1-202ENST00000570380 RPRD2Q5VT52 1461 aaKnown RBP16.52■□□□□ 0.23
CTDNEP1-202ENST00000570380 RBM6P78332 1123 aaKnown RBP16.51■□□□□ 0.23
CTDNEP1-202ENST00000570380 QTRT2Q9H974 415 aaKnown RBP16.51■□□□□ 0.23
CTDNEP1-202ENST00000570380 CHIC2Q9UKJ5 165 aa16.51■□□□□ 0.23
CTDNEP1-202ENST00000570380 SETD5Q9C0A6 1442 aa16.51■□□□□ 0.23
CTDNEP1-202ENST00000570380 ANKRD30AQ9BXX3 1397 aa16.51■□□□□ 0.23
CTDNEP1-202ENST00000570380 ASXL1Q8IXJ9 1541 aa16.5■□□□□ 0.23
CTDNEP1-202ENST00000570380 NUTM2DQ5VT03 806 aaPredicted RBP16.5■□□□□ 0.23
CTDNEP1-202ENST00000570380 PIK3R4Q99570 1358 aa16.5■□□□□ 0.23
CTDNEP1-202ENST00000570380 C8orf37Q96NL8 207 aa16.49■□□□□ 0.23
CTDNEP1-202ENST00000570380 PTPRUQ92729 1446 aa16.47■□□□□ 0.23
CTDNEP1-202ENST00000570380 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.47■□□□□ 0.23
CTDNEP1-202ENST00000570380 AMOTL2Q9Y2J4 779 aa16.47■□□□□ 0.23
CTDNEP1-202ENST00000570380 TRPM2O94759 1503 aa16.46■□□□□ 0.23
CTDNEP1-202ENST00000570380 LRRC59Q96AG4 307 aaKnown RBP16.46■□□□□ 0.23
CTDNEP1-202ENST00000570380 DCCP43146 1447 aa16.45■□□□□ 0.22
CTDNEP1-202ENST00000570380 MST1RQ04912 1400 aa16.45■□□□□ 0.22
CTDNEP1-202ENST00000570380 CHGAP10645 457 aaKnown RBP16.45■□□□□ 0.22
CTDNEP1-202ENST00000570380 UNC13BO14795 1591 aa16.44■□□□□ 0.22
CTDNEP1-202ENST00000570380 SETBP1Q9Y6X0 1596 aa16.44■□□□□ 0.22
CTDNEP1-202ENST00000570380 PNPLA6Q8IY17 1366 aa16.44■□□□□ 0.22
CTDNEP1-202ENST00000570380 XRN1Q8IZH2 1706 aaKnown RBP16.44■□□□□ 0.22
CTDNEP1-202ENST00000570380 ATAD2Q6PL18 1390 aa16.43■□□□□ 0.22
CTDNEP1-202ENST00000570380 DDX17Q92841 729 aaKnown RBP16.43■□□□□ 0.22
CTDNEP1-202ENST00000570380 E9PCH4 1651 aa16.43■□□□□ 0.22
CTDNEP1-202ENST00000570380 EP400Q96L91 3159 aa16.42■□□□□ 0.22
CTDNEP1-202ENST00000570380 ADGRL2O95490 1459 aa16.42■□□□□ 0.22
CTDNEP1-202ENST00000570380 NGLY1Q96IV0 654 aa16.42■□□□□ 0.22
CTDNEP1-202ENST00000570380 ZRANB1Q9UGI0 708 aa16.42■□□□□ 0.22
CTDNEP1-202ENST00000570380 NRXN3Q9Y4C0 1643 aa16.41■□□□□ 0.22
CTDNEP1-202ENST00000570380 ADAMTS2O95450 1211 aa16.4■□□□□ 0.22
CTDNEP1-202ENST00000570380 ANKRD50Q9ULJ7 1429 aa16.39■□□□□ 0.21
CTDNEP1-202ENST00000570380 NALCNQ8IZF0 1738 aa16.38■□□□□ 0.21
CTDNEP1-202ENST00000570380 FOXD1Q16676 465 aa16.37■□□□□ 0.21
CTDNEP1-202ENST00000570380 USP21Q9UK80 565 aa16.36■□□□□ 0.21
CTDNEP1-202ENST00000570380 LAMC1P11047 1609 aa16.36■□□□□ 0.21
CTDNEP1-202ENST00000570380 TRPC5Q9UL62 973 aaPredicted RBP16.34■□□□□ 0.21
CTDNEP1-202ENST00000570380 ADGRL3Q9HAR2 1447 aa16.34■□□□□ 0.21
CTDNEP1-202ENST00000570380 FNBP4Q8N3X1 1017 aaPredicted RBP16.33■□□□□ 0.2
CTDNEP1-202ENST00000570380 ATRNO75882 1429 aa16.33■□□□□ 0.2
CTDNEP1-202ENST00000570380 LOC105371045A0A1W2PR82 267 aa16.32■□□□□ 0.2
CTDNEP1-202ENST00000570380 METP08581 1390 aa16.32■□□□□ 0.2
CTDNEP1-202ENST00000570380 MARF1Q9Y4F3 1742 aaKnown RBP16.31■□□□□ 0.2
CTDNEP1-202ENST00000570380 IQGAP3Q86VI3 1631 aa16.31■□□□□ 0.2
CTDNEP1-202ENST00000570380 CCDC125Q86Z20 511 aa16.31■□□□□ 0.2
CTDNEP1-202ENST00000570380 COL22A1Q8NFW1 1626 aaPredicted RBP16.3■□□□□ 0.2
CTDNEP1-202ENST00000570380 C1orf167Q5SNV9 1468 aa16.3■□□□□ 0.2
CTDNEP1-202ENST00000570380 PTCH1Q13635 1447 aa16.3■□□□□ 0.2
CTDNEP1-202ENST00000570380 SOS2Q07890 1332 aaPredicted RBP16.3■□□□□ 0.2
CTDNEP1-202ENST00000570380 APLP2Q06481 763 aa16.29■□□□□ 0.2
CTDNEP1-202ENST00000570380 FAM50AQ14320 339 aaKnown RBP16.27■□□□□ 0.2
CTDNEP1-202ENST00000570380 ORAI2Q96SN7 254 aa16.27■□□□□ 0.2
CTDNEP1-202ENST00000570380 BCL9LQ86UU0 1499 aa16.26■□□□□ 0.19
CTDNEP1-202ENST00000570380 BRWD3Q6RI45 1802 aa16.26■□□□□ 0.19
CTDNEP1-202ENST00000570380 SPHKAPQ2M3C7 1700 aa16.25■□□□□ 0.19
CTDNEP1-202ENST00000570380 LRP5O75197 1615 aa16.23■□□□□ 0.19
CTDNEP1-202ENST00000570380 MYOM2P54296 1465 aa16.22■□□□□ 0.19
CTDNEP1-202ENST00000570380 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.22■□□□□ 0.19
CTDNEP1-202ENST00000570380 ZNF326Q5BKZ1 582 aaKnown RBP16.22■□□□□ 0.19
CTDNEP1-202ENST00000570380 GJD4Q96KN9 370 aaPredicted RBP16.22■□□□□ 0.19
CTDNEP1-202ENST00000570380 NEXMIFQ5QGS0 1516 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms