RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PLEKHG1Q9ULL1 1385 aa25.96■■□□□ 1.75
MAP1LC3B-208ENST00000570189 RIMS2Q9UQ26 1411 aa25.96■■□□□ 1.75
MAP1LC3B-208ENST00000570189 HDGFP51858 240 aaKnown RBP25.95■■□□□ 1.74
MAP1LC3B-208ENST00000570189 NKTRP30414 1462 aaKnown RBP25.94■■□□□ 1.74
MAP1LC3B-208ENST00000570189 CHD2O14647 1828 aaKnown RBP25.93■■□□□ 1.74
MAP1LC3B-208ENST00000570189 DIP2AQ14689 1571 aa25.91■■□□□ 1.74
MAP1LC3B-208ENST00000570189 KCNA6P17658 529 aa25.91■■□□□ 1.74
MAP1LC3B-208ENST00000570189 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.9■■□□□ 1.74
MAP1LC3B-208ENST00000570189 TRPM2O94759 1503 aa25.88■■□□□ 1.73
MAP1LC3B-208ENST00000570189 SLC26A8Q96RN1 970 aa25.86■■□□□ 1.73
MAP1LC3B-208ENST00000570189 TBX22Q9Y458 520 aa25.84■■□□□ 1.73
MAP1LC3B-208ENST00000570189 ADAMTS13Q76LX8 1427 aa25.83■■□□□ 1.73
MAP1LC3B-208ENST00000570189 PIP4K2BP78356 416 aa25.83■■□□□ 1.73
MAP1LC3B-208ENST00000570189 TMEM94Q12767 1356 aa25.82■■□□□ 1.72
MAP1LC3B-208ENST00000570189 PIK3R4Q99570 1358 aa25.82■■□□□ 1.72
MAP1LC3B-208ENST00000570189 CLTCL1P53675 1640 aa25.82■■□□□ 1.72
MAP1LC3B-208ENST00000570189 PPP1R15AO75807 674 aaPredicted RBP25.82■■□□□ 1.72
MAP1LC3B-208ENST00000570189 HSPA1LP34931 641 aa25.82■■□□□ 1.72
MAP1LC3B-208ENST00000570189 DISP3Q9P2K9 1392 aa25.82■■□□□ 1.72
MAP1LC3B-208ENST00000570189 KIF1BO60333 1816 aa25.81■■□□□ 1.72
MAP1LC3B-208ENST00000570189 SCAF1Q9H7N4 1312 aaKnown RBP25.8■■□□□ 1.72
MAP1LC3B-208ENST00000570189 SETBP1Q9Y6X0 1596 aa25.79■■□□□ 1.72
MAP1LC3B-208ENST00000570189 CHGAP10645 457 aaKnown RBP25.79■■□□□ 1.72
MAP1LC3B-208ENST00000570189 NCOA3Q9Y6Q9 1424 aa25.79■■□□□ 1.72
MAP1LC3B-208ENST00000570189 NRXN3Q9Y4C0 1643 aa25.78■■□□□ 1.72
MAP1LC3B-208ENST00000570189 FAM135BQ49AJ0 1406 aa25.76■■□□□ 1.71
MAP1LC3B-208ENST00000570189 PROSER2Q86WR7 435 aaPredicted RBP25.75■■□□□ 1.71
MAP1LC3B-208ENST00000570189 BCANQ96GW7 911 aa25.75■■□□□ 1.71
MAP1LC3B-208ENST00000570189 NEXMIFQ5QGS0 1516 aa25.74■■□□□ 1.71
MAP1LC3B-208ENST00000570189 MED1Q15648 1581 aaPredicted RBP25.7■■□□□ 1.71
MAP1LC3B-208ENST00000570189 XRN1Q8IZH2 1706 aaKnown RBP25.7■■□□□ 1.7
MAP1LC3B-208ENST00000570189 MSH6P52701 1360 aa25.69■■□□□ 1.7
MAP1LC3B-208ENST00000570189 ACIN1Q9UKV3 1341 aaKnown RBP25.68■■□□□ 1.7
MAP1LC3B-208ENST00000570189 ROBO1Q9Y6N7 1651 aa25.68■■□□□ 1.7
MAP1LC3B-208ENST00000570189 NUTM2DQ5VT03 806 aaPredicted RBP25.67■■□□□ 1.7
MAP1LC3B-208ENST00000570189 TRIM52Q96A61 297 aa25.67■■□□□ 1.7
MAP1LC3B-208ENST00000570189 SLC4A1APQ9BWU0 796 aaKnown RBP25.67■■□□□ 1.7
MAP1LC3B-208ENST00000570189 PTPRUQ92729 1446 aa25.64■■□□□ 1.7
MAP1LC3B-208ENST00000570189 PPLO60437 1756 aa25.64■■□□□ 1.69
MAP1LC3B-208ENST00000570189 ZNF326Q5BKZ1 582 aaKnown RBP25.63■■□□□ 1.69
MAP1LC3B-208ENST00000570189 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.63■■□□□ 1.69
MAP1LC3B-208ENST00000570189 ILDR2Q71H61 639 aa25.62■■□□□ 1.69
MAP1LC3B-208ENST00000570189 SETD1AO15047 1707 aaKnown RBP25.62■■□□□ 1.69
MAP1LC3B-208ENST00000570189 RPGRIP1LQ68CZ1 1315 aa25.62■■□□□ 1.69
MAP1LC3B-208ENST00000570189 RBM33Q96EV2 1170 aaKnown RBP25.6■■□□□ 1.69
MAP1LC3B-208ENST00000570189 SENP3Q9H4L4 574 aaPredicted RBP25.59■■□□□ 1.69
MAP1LC3B-208ENST00000570189 DCCP43146 1447 aa25.58■■□□□ 1.69
MAP1LC3B-208ENST00000570189 AMOTL2Q9Y2J4 779 aa25.58■■□□□ 1.69
MAP1LC3B-208ENST00000570189 SLAIN2Q9P270 581 aa25.57■■□□□ 1.68
MAP1LC3B-208ENST00000570189 PRAG1Q86YV5 1406 aa25.56■■□□□ 1.68
MAP1LC3B-208ENST00000570189 C19orf44Q9H6X5 657 aa25.56■■□□□ 1.68
MAP1LC3B-208ENST00000570189 METP08581 1390 aa25.56■■□□□ 1.68
MAP1LC3B-208ENST00000570189 SETD5Q9C0A6 1442 aa25.55■■□□□ 1.68
MAP1LC3B-208ENST00000570189 VGFO15240 615 aaPredicted RBP25.55■■□□□ 1.68
MAP1LC3B-208ENST00000570189 IFT172Q9UG01 1749 aa25.54■■□□□ 1.68
MAP1LC3B-208ENST00000570189 CADPS2Q86UW7 1296 aa25.53■■□□□ 1.68
MAP1LC3B-208ENST00000570189 MPHOSPH9Q99550 1183 aa25.53■■□□□ 1.68
MAP1LC3B-208ENST00000570189 CCDC144AA2RUR9 1427 aa25.53■■□□□ 1.68
MAP1LC3B-208ENST00000570189 PHLPP1O60346 1717 aa25.52■■□□□ 1.68
MAP1LC3B-208ENST00000570189 SPATA31E1Q6ZUB1 1445 aa25.52■■□□□ 1.68
MAP1LC3B-208ENST00000570189 PTCH1Q13635 1447 aa25.49■■□□□ 1.67
MAP1LC3B-208ENST00000570189 SOCS7O14512 581 aa25.49■■□□□ 1.67
MAP1LC3B-208ENST00000570189 COL16A1Q07092 1604 aaPredicted RBP25.48■■□□□ 1.67
MAP1LC3B-208ENST00000570189 AHDC1Q5TGY3 1603 aaPredicted RBP25.48■■□□□ 1.67
MAP1LC3B-208ENST00000570189 ADGRL3Q9HAR2 1447 aa25.46■■□□□ 1.67
MAP1LC3B-208ENST00000570189 NALCNQ8IZF0 1738 aa25.46■■□□□ 1.67
MAP1LC3B-208ENST00000570189 ATF3P18847 181 aa25.46■■□□□ 1.67
MAP1LC3B-208ENST00000570189 FOXD1Q16676 465 aa25.46■■□□□ 1.67
MAP1LC3B-208ENST00000570189 C14orf37Q86TY3 774 aa25.46■■□□□ 1.67
MAP1LC3B-208ENST00000570189 ANKRD30BQ9BXX2 1392 aa25.44■■□□□ 1.66
MAP1LC3B-208ENST00000570189 RAB3GAP2Q9H2M9 1393 aa25.43■■□□□ 1.66
MAP1LC3B-208ENST00000570189 MST1RQ04912 1400 aa25.41■■□□□ 1.66
MAP1LC3B-208ENST00000570189 JCADQ9P266 1359 aa25.4■■□□□ 1.66
MAP1LC3B-208ENST00000570189 NHSL1Q5SYE7 1610 aa25.39■■□□□ 1.66
MAP1LC3B-208ENST00000570189 SHPRHQ149N8 1683 aa25.39■■□□□ 1.65
MAP1LC3B-208ENST00000570189 HRCP23327 699 aa25.38■■□□□ 1.65
MAP1LC3B-208ENST00000570189 ASXL1Q8IXJ9 1541 aa25.37■■□□□ 1.65
MAP1LC3B-208ENST00000570189 PHF23Q9BUL5 403 aaPredicted RBP25.37■■□□□ 1.65
MAP1LC3B-208ENST00000570189 ROBO2Q9HCK4 1378 aa25.36■■□□□ 1.65
MAP1LC3B-208ENST00000570189 KNDC1Q76NI1 1749 aa25.36■■□□□ 1.65
MAP1LC3B-208ENST00000570189 TECPR2O15040 1411 aa25.36■■□□□ 1.65
MAP1LC3B-208ENST00000570189 PIK3C2GO75747 1445 aa25.36■■□□□ 1.65
MAP1LC3B-208ENST00000570189 LAMC1P11047 1609 aa25.35■■□□□ 1.65
MAP1LC3B-208ENST00000570189 BRINP3Q76B58 766 aa25.35■■□□□ 1.65
MAP1LC3B-208ENST00000570189 NRXN1Q9ULB1 1477 aa25.34■■□□□ 1.65
MAP1LC3B-208ENST00000570189 ADGRF5Q8IZF2 1346 aa25.34■■□□□ 1.65
MAP1LC3B-208ENST00000570189 MYOM2P54296 1465 aa25.33■■□□□ 1.65
MAP1LC3B-208ENST00000570189 RGS17Q9UGC6 210 aaPredicted RBP25.3■■□□□ 1.64
MAP1LC3B-208ENST00000570189 CDC42BPGQ6DT37 1551 aa25.3■■□□□ 1.64
MAP1LC3B-208ENST00000570189 RGL3Q3MIN7 710 aa25.29■■□□□ 1.64
MAP1LC3B-208ENST00000570189 SPATA31A6Q5VVP1 1343 aa25.29■■□□□ 1.64
MAP1LC3B-208ENST00000570189 C1orf167Q5SNV9 1468 aa25.28■■□□□ 1.64
MAP1LC3B-208ENST00000570189 LRPPRCP42704 1394 aaKnown RBP25.27■■□□□ 1.64
MAP1LC3B-208ENST00000570189 ABCC11Q96J66 1382 aa25.27■■□□□ 1.64
MAP1LC3B-208ENST00000570189 LRP6O75581 1613 aa25.23■■□□□ 1.63
MAP1LC3B-208ENST00000570189 C14orf93Q9H972 538 aaKnown RBP25.21■■□□□ 1.63
MAP1LC3B-208ENST00000570189 YTHDC2Q9H6S0 1430 aaKnown RBP25.2■■□□□ 1.63
MAP1LC3B-208ENST00000570189 SIRT1Q96EB6 747 aa25.2■■□□□ 1.62
MAP1LC3B-208ENST00000570189 LRRC59Q96AG4 307 aaKnown RBP25.17■■□□□ 1.62
MAP1LC3B-208ENST00000570189 STAC3Q96MF2 364 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms