RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 VWDEQ8N2E2 1590 aa7.43□□□□□ -1.22
SF3B3-213ENST00000569687 ZMYM4Q5VZL5 1548 aa7.42□□□□□ -1.22
SF3B3-213ENST00000569687 EIF2AK4Q9P2K8 1649 aaKnown RBP7.42□□□□□ -1.22
SF3B3-213ENST00000569687 ST20-MTHFSA0A0A6YYL1 179 aa7.42□□□□□ -1.22
SF3B3-213ENST00000569687 KIF3BO15066 747 aa7.42□□□□□ -1.22
SF3B3-213ENST00000569687 RAPGEF3O95398 923 aa7.42□□□□□ -1.22
SF3B3-213ENST00000569687 ZNF326Q5BKZ1 582 aaKnown RBP7.42□□□□□ -1.22
SF3B3-213ENST00000569687 A2MP01023 1474 aa7.42□□□□□ -1.22
SF3B3-213ENST00000569687 DEPDC5O75140 1603 aa7.41□□□□□ -1.22
SF3B3-213ENST00000569687 ABCA6Q8N139 1617 aa7.41□□□□□ -1.22
SF3B3-213ENST00000569687 CAPN15O75808 1086 aa7.41□□□□□ -1.22
SF3B3-213ENST00000569687 RGL3Q3MIN7 710 aa7.41□□□□□ -1.22
SF3B3-213ENST00000569687 MYT1LQ9UL68 1186 aa7.41□□□□□ -1.22
SF3B3-213ENST00000569687 NEURL4Q96JN8 1562 aa7.41□□□□□ -1.22
SF3B3-213ENST00000569687 DIP2CQ9Y2E4 1556 aa7.41□□□□□ -1.22
SF3B3-213ENST00000569687 NBPF1Q3BBV0 1214 aa7.4□□□□□ -1.22
SF3B3-213ENST00000569687 PLCD3Q8N3E9 789 aa7.4□□□□□ -1.22
SF3B3-213ENST00000569687 KTN1Q86UP2 1357 aaKnown RBP7.4□□□□□ -1.22
SF3B3-213ENST00000569687 PRDM15P57071 1507 aaPredicted RBP7.4□□□□□ -1.22
SF3B3-213ENST00000569687 LMTK2Q8IWU2 1503 aa7.4□□□□□ -1.22
SF3B3-213ENST00000569687 POLR1AO95602 1720 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-213ENST00000569687 BCORL1Q5H9F3 1711 aa7.39□□□□□ -1.23
SF3B3-213ENST00000569687 LAMC1P11047 1609 aa7.39□□□□□ -1.23
SF3B3-213ENST00000569687 RNF17Q9BXT8 1623 aaKnown RBP7.39□□□□□ -1.23
SF3B3-213ENST00000569687 TRPM2O94759 1503 aa7.39□□□□□ -1.23
SF3B3-213ENST00000569687 COL17A1Q9UMD9 1497 aaPredicted RBP7.39□□□□□ -1.23
SF3B3-213ENST00000569687 YEATS2Q9ULM3 1422 aa7.39□□□□□ -1.23
SF3B3-213ENST00000569687 WASHC2CQ9Y4E1 1318 aa7.39□□□□□ -1.23
SF3B3-213ENST00000569687 CHGAP10645 457 aaKnown RBP7.39□□□□□ -1.23
SF3B3-213ENST00000569687 STAG3Q9UJ98 1225 aa7.39□□□□□ -1.23
SF3B3-213ENST00000569687 MROH1Q8NDA8 1641 aa7.38□□□□□ -1.23
SF3B3-213ENST00000569687 TESK2Q96S53 571 aa7.38□□□□□ -1.23
SF3B3-213ENST00000569687 ZBTB12Q9Y330 459 aaPredicted RBP7.38□□□□□ -1.23
SF3B3-213ENST00000569687 TET3O43151 1660 aa7.38□□□□□ -1.23
SF3B3-213ENST00000569687 TRPM1Q7Z4N2 1603 aa7.38□□□□□ -1.23
SF3B3-213ENST00000569687 REREQ9P2R6 1566 aa7.37□□□□□ -1.23
SF3B3-213ENST00000569687 RALBP1Q15311 655 aa7.37□□□□□ -1.23
SF3B3-213ENST00000569687 E9PCH4 1651 aa7.37□□□□□ -1.23
SF3B3-213ENST00000569687 ARHGEF40Q8TER5 1519 aa7.37□□□□□ -1.23
SF3B3-213ENST00000569687 PER1O15534 1290 aaPredicted RBP7.36□□□□□ -1.23
SF3B3-213ENST00000569687 NBR1Q14596 966 aa7.36□□□□□ -1.23
SF3B3-213ENST00000569687 CCDC184Q52MB2 194 aa7.36□□□□□ -1.23
SF3B3-213ENST00000569687 RPGRIP1LQ68CZ1 1315 aa7.35□□□□□ -1.23
SF3B3-213ENST00000569687 TMF1P82094 1093 aa7.35□□□□□ -1.23
SF3B3-213ENST00000569687 MRS2Q9HD23 443 aa7.35□□□□□ -1.23
SF3B3-213ENST00000569687 SUPT16HQ9Y5B9 1047 aaKnown RBP7.35□□□□□ -1.23
SF3B3-213ENST00000569687 AGLP35573 1532 aa7.34□□□□□ -1.23
SF3B3-213ENST00000569687 EFCAB6Q5THR3 1501 aa7.34□□□□□ -1.23
SF3B3-213ENST00000569687 ABCB7O75027 752 aa7.34□□□□□ -1.23
SF3B3-213ENST00000569687 CDCA8Q53HL2 280 aa7.34□□□□□ -1.23
SF3B3-213ENST00000569687 PNISRQ8TF01 805 aaKnown RBP7.34□□□□□ -1.23
SF3B3-213ENST00000569687 ZNF692Q9BU19 519 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-213ENST00000569687 CIZ1Q9ULV3 898 aaPredicted RBP7.34□□□□□ -1.23
SF3B3-213ENST00000569687 ABCC3O15438 1527 aa7.33□□□□□ -1.24
SF3B3-213ENST00000569687 HNRNPUQ00839 825 aaKnown RBP eCLIP7.33□□□□□ -1.24
SF3B3-213ENST00000569687 ARHGAP31Q2M1Z3 1444 aa7.33□□□□□ -1.24
SF3B3-213ENST00000569687 SPHKAPQ2M3C7 1700 aa7.32□□□□□ -1.24
SF3B3-213ENST00000569687 ZBED9Q6R2W3 1325 aa7.32□□□□□ -1.24
SF3B3-213ENST00000569687 ZC3H13Q5T200 1668 aaKnown RBP7.32□□□□□ -1.24
SF3B3-213ENST00000569687 MYOM2P54296 1465 aa7.32□□□□□ -1.24
SF3B3-213ENST00000569687 SCAF11Q99590 1463 aaKnown RBP7.32□□□□□ -1.24
SF3B3-213ENST00000569687 NRXN1Q9ULB1 1477 aa7.32□□□□□ -1.24
SF3B3-213ENST00000569687 CLTCL1P53675 1640 aa7.32□□□□□ -1.24
SF3B3-213ENST00000569687 ERICH6BQ5W0A0 696 aa7.32□□□□□ -1.24
SF3B3-213ENST00000569687 PELP1Q8IZL8 1130 aaKnown RBP7.32□□□□□ -1.24
SF3B3-213ENST00000569687 CEP152O94986 1710 aa7.32□□□□□ -1.24
SF3B3-213ENST00000569687 SIGLEC1Q9BZZ2 1709 aa7.32□□□□□ -1.24
SF3B3-213ENST00000569687 BRD4O60885 1362 aaPredicted RBP7.32□□□□□ -1.24
SF3B3-213ENST00000569687 MYBBP1AQ9BQG0 1328 aaKnown RBP7.31□□□□□ -1.24
SF3B3-213ENST00000569687 MADDQ8WXG6 1647 aa7.31□□□□□ -1.24
SF3B3-213ENST00000569687 NOS1P29475 1434 aa7.31□□□□□ -1.24
SF3B3-213ENST00000569687 NPATQ14207 1427 aa7.31□□□□□ -1.24
SF3B3-213ENST00000569687 GGT6Q6P531 493 aa7.31□□□□□ -1.24
SF3B3-213ENST00000569687 POLR3GLQ9BT43 218 aa7.31□□□□□ -1.24
SF3B3-213ENST00000569687 C14orf93Q9H972 538 aaKnown RBP7.31□□□□□ -1.24
SF3B3-213ENST00000569687 PANK3Q9H999 370 aa7.31□□□□□ -1.24
SF3B3-213ENST00000569687 SLC52A1Q9NWF4 448 aa7.31□□□□□ -1.24
SF3B3-213ENST00000569687 KIAA1210Q9ULL0 1709 aa7.31□□□□□ -1.24
SF3B3-213ENST00000569687 INSRP06213 1382 aa7.31□□□□□ -1.24
SF3B3-213ENST00000569687 PARD3Q8TEW0 1356 aa7.31□□□□□ -1.24
SF3B3-213ENST00000569687 FAM9BQ8IZU0 186 aa7.3□□□□□ -1.24
SF3B3-213ENST00000569687 TMC1Q8TDI8 760 aa7.3□□□□□ -1.24
SF3B3-213ENST00000569687 LRPPRCP42704 1394 aaKnown RBP7.3□□□□□ -1.24
SF3B3-213ENST00000569687 DISP3Q9P2K9 1392 aa7.3□□□□□ -1.24
SF3B3-213ENST00000569687 CAMSAP1Q5T5Y3 1602 aa7.3□□□□□ -1.24
SF3B3-213ENST00000569687 ADGRF5Q8IZF2 1346 aa7.29□□□□□ -1.24
SF3B3-213ENST00000569687 TULP1O00294 542 aaPredicted RBP7.29□□□□□ -1.24
SF3B3-213ENST00000569687 CFAP70Q5T0N1 1121 aa7.29□□□□□ -1.24
SF3B3-213ENST00000569687 NLRP13Q86W25 1043 aa7.29□□□□□ -1.24
SF3B3-213ENST00000569687 PUS7Q96PZ0 661 aaKnown RBP7.29□□□□□ -1.24
SF3B3-213ENST00000569687 RNF39Q9H2S5 420 aa7.29□□□□□ -1.24
SF3B3-213ENST00000569687 EIF3AQ14152 1382 aaKnown RBP7.29□□□□□ -1.24
SF3B3-213ENST00000569687 NPC1L1Q9UHC9 1359 aa7.29□□□□□ -1.24
SF3B3-213ENST00000569687 ZFYVE9O95405 1425 aa7.28□□□□□ -1.24
SF3B3-213ENST00000569687 VGFO15240 615 aaPredicted RBP7.28□□□□□ -1.24
SF3B3-213ENST00000569687 NEFLP07196 543 aa7.28□□□□□ -1.24
SF3B3-213ENST00000569687 HS6ST3Q8IZP7 471 aa7.28□□□□□ -1.24
SF3B3-213ENST00000569687 SSUH2Q9Y2M2 353 aa7.28□□□□□ -1.24
SF3B3-213ENST00000569687 SBNO2Q9Y2G9 1366 aa7.28□□□□□ -1.24
SF3B3-213ENST00000569687 ADGRB3O60242 1522 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms