RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 SPHKAPQ2M3C7 1700 aa13.34□□□□□ -0.27
CNOT1-214ENST00000568917 ZC3H13Q5T200 1668 aaKnown RBP13.34□□□□□ -0.27
CNOT1-214ENST00000568917 DIEXFQ68CQ4 756 aaKnown RBP13.34□□□□□ -0.27
CNOT1-214ENST00000568917 PLCD3Q8N3E9 789 aa13.34□□□□□ -0.27
CNOT1-214ENST00000568917 UHRF1BP1Q6BDS2 1440 aa13.34□□□□□ -0.27
CNOT1-214ENST00000568917 PLA2R1Q13018 1463 aa13.33□□□□□ -0.27
CNOT1-214ENST00000568917 EFCAB6Q5THR3 1501 aa13.33□□□□□ -0.28
CNOT1-214ENST00000568917 RAPGEF3O95398 923 aa13.32□□□□□ -0.28
CNOT1-214ENST00000568917 DNAJC5Q9H3Z4 198 aa13.32□□□□□ -0.28
CNOT1-214ENST00000568917 STAC3Q96MF2 364 aa13.31□□□□□ -0.28
CNOT1-214ENST00000568917 CEP152O94986 1710 aa13.31□□□□□ -0.28
CNOT1-214ENST00000568917 AGLP35573 1532 aa13.31□□□□□ -0.28
CNOT1-214ENST00000568917 ARHGAP31Q2M1Z3 1444 aa13.27□□□□□ -0.29
CNOT1-214ENST00000568917 YEATS2Q9ULM3 1422 aa13.27□□□□□ -0.29
CNOT1-214ENST00000568917 ABCC3O15438 1527 aa13.27□□□□□ -0.29
CNOT1-214ENST00000568917 PLEKHG5O94827 1062 aa13.26□□□□□ -0.29
CNOT1-214ENST00000568917 RALGAPBQ86X10 1494 aa13.26□□□□□ -0.29
CNOT1-214ENST00000568917 ARHGEF40Q8TER5 1519 aa13.26□□□□□ -0.29
CNOT1-214ENST00000568917 CLTCL1P53675 1640 aa13.25□□□□□ -0.29
CNOT1-214ENST00000568917 CAMSAP1Q5T5Y3 1602 aa13.25□□□□□ -0.29
CNOT1-214ENST00000568917 SPATA31E1Q6ZUB1 1445 aa13.25□□□□□ -0.29
CNOT1-214ENST00000568917 CNTLNQ9NXG0 1405 aa13.24□□□□□ -0.29
CNOT1-214ENST00000568917 EIF4G2P78344 907 aaKnown RBP eCLIP13.24□□□□□ -0.296e-11■■■■□ 25.1
CNOT1-214ENST00000568917 NBPF8Q3BBV2 869 aa13.24□□□□□ -0.29
CNOT1-214ENST00000568917 KIF1BO60333 1816 aa13.24□□□□□ -0.29
CNOT1-214ENST00000568917 LAMC1P11047 1609 aa13.24□□□□□ -0.29
CNOT1-214ENST00000568917 CD44P16070 742 aaKnown RBP13.23□□□□□ -0.29
CNOT1-214ENST00000568917 NPATQ14207 1427 aa13.22□□□□□ -0.29
CNOT1-214ENST00000568917 PRAG1Q86YV5 1406 aa13.22□□□□□ -0.29
CNOT1-214ENST00000568917 POLR1AO95602 1720 aaPredicted RBP13.21□□□□□ -0.29
CNOT1-214ENST00000568917 WASHC2CQ9Y4E1 1318 aa13.21□□□□□ -0.29
CNOT1-214ENST00000568917 COL17A1Q9UMD9 1497 aaPredicted RBP13.21□□□□□ -0.29
CNOT1-214ENST00000568917 TRPM1Q7Z4N2 1603 aa13.21□□□□□ -0.3
CNOT1-214ENST00000568917 GGT6Q6P531 493 aa13.2□□□□□ -0.3
CNOT1-214ENST00000568917 NOS1P29475 1434 aa13.2□□□□□ -0.3
CNOT1-214ENST00000568917 IFNLR1Q8IU57 520 aaPredicted RBP13.19□□□□□ -0.3
CNOT1-214ENST00000568917 DCAF11Q8TEB1 546 aa13.19□□□□□ -0.3
CNOT1-214ENST00000568917 GPRASP1Q5JY77 1395 aa13.19□□□□□ -0.3
CNOT1-214ENST00000568917 PIK3C2BO00750 1634 aa13.18□□□□□ -0.3
CNOT1-214ENST00000568917 KIAA1210Q9ULL0 1709 aa13.18□□□□□ -0.3
CNOT1-214ENST00000568917 MYOM2P54296 1465 aa13.18□□□□□ -0.3
CNOT1-214ENST00000568917 HSPA5P11021 654 aaKnown RBP13.17□□□□□ -0.3
CNOT1-214ENST00000568917 SP7Q8TDD2 431 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-214ENST00000568917 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
CNOT1-214ENST00000568917 ADGRB3O60242 1522 aa13.17□□□□□ -0.3
CNOT1-214ENST00000568917 IFT172Q9UG01 1749 aa13.17□□□□□ -0.3
CNOT1-214ENST00000568917 ARID4BQ4LE39 1312 aaPredicted RBP13.16□□□□□ -0.3
CNOT1-214ENST00000568917 NUBP1P53384 320 aa13.15□□□□□ -0.3
CNOT1-214ENST00000568917 MADDQ8WXG6 1647 aa13.15□□□□□ -0.3
CNOT1-214ENST00000568917 SLC24A1O60721 1099 aa13.14□□□□□ -0.31
CNOT1-214ENST00000568917 RASEFQ8IZ41 740 aa13.14□□□□□ -0.31
CNOT1-214ENST00000568917 SIGLEC1Q9BZZ2 1709 aa13.14□□□□□ -0.31
CNOT1-214ENST00000568917 USP47Q96K76 1375 aa13.14□□□□□ -0.31
CNOT1-214ENST00000568917 PREX1Q8TCU6 1659 aa13.14□□□□□ -0.31
CNOT1-214ENST00000568917 RGL3Q3MIN7 710 aa13.13□□□□□ -0.31
CNOT1-214ENST00000568917 ROCK2O75116 1388 aaKnown RBP13.13□□□□□ -0.31
CNOT1-214ENST00000568917 SYNMO15061 1565 aa13.13□□□□□ -0.31
CNOT1-214ENST00000568917 RPGRIP1LQ68CZ1 1315 aa13.13□□□□□ -0.31
CNOT1-214ENST00000568917 SLC52A1Q9NWF4 448 aa13.13□□□□□ -0.31
CNOT1-214ENST00000568917 MROH2AA6NES4 1674 aa13.12□□□□□ -0.31
CNOT1-214ENST00000568917 NRXN1Q9ULB1 1477 aa13.12□□□□□ -0.31
CNOT1-214ENST00000568917 CARD11Q9BXL7 1154 aa13.12□□□□□ -0.31
CNOT1-214ENST00000568917 ZRANB1Q9UGI0 708 aa13.12□□□□□ -0.31
CNOT1-214ENST00000568917 KDM2AQ9Y2K7 1162 aa13.12□□□□□ -0.31
CNOT1-214ENST00000568917 UGGT1Q9NYU2 1555 aa13.11□□□□□ -0.31
CNOT1-214ENST00000568917 ZNF326Q5BKZ1 582 aaKnown RBP13.11□□□□□ -0.31
CNOT1-214ENST00000568917 PPLO60437 1756 aa13.11□□□□□ -0.31
CNOT1-214ENST00000568917 SPATA31D1Q6ZQQ2 1576 aa13.1□□□□□ -0.31
CNOT1-214ENST00000568917 CFAP65Q6ZU64 1925 aaKnown RBP13.1□□□□□ -0.31
CNOT1-214ENST00000568917 CLTCQ00610 1675 aaKnown RBP13.1□□□□□ -0.31
CNOT1-214ENST00000568917 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
CNOT1-214ENST00000568917 ERVK-7P63135 1459 aa13.09□□□□□ -0.31
CNOT1-214ENST00000568917 CCDC7Q96M83 1385 aa13.08□□□□□ -0.32
CNOT1-214ENST00000568917 TSPYL2Q9H2G4 693 aaPredicted RBP13.08□□□□□ -0.32
CNOT1-214ENST00000568917 IQGAP1P46940 1657 aa13.07□□□□□ -0.32
CNOT1-214ENST00000568917 WASHC2AQ641Q2 1341 aa13.07□□□□□ -0.32
CNOT1-214ENST00000568917 SETBP1Q9Y6X0 1596 aa13.07□□□□□ -0.32
CNOT1-214ENST00000568917 ZFYVE9O95405 1425 aa13.07□□□□□ -0.32
CNOT1-214ENST00000568917 DDX10Q13206 875 aaKnown RBP13.07□□□□□ -0.32
CNOT1-214ENST00000568917 ZNF579Q8NAF0 562 aaKnown RBP13.07□□□□□ -0.32
CNOT1-214ENST00000568917 HIRIP3Q9BW71 556 aaPredicted RBP13.07□□□□□ -0.32
CNOT1-214ENST00000568917 TMEM131LA2VDJ0 1609 aa13.05□□□□□ -0.32
CNOT1-214ENST00000568917 KDM5AP29375 1690 aaKnown RBP13.05□□□□□ -0.32
CNOT1-214ENST00000568917 PAK3O75914 559 aaPredicted RBP13.05□□□□□ -0.32
CNOT1-214ENST00000568917 SCAF11Q99590 1463 aaKnown RBP13.04□□□□□ -0.32
CNOT1-214ENST00000568917 NEXMIFQ5QGS0 1516 aa13.04□□□□□ -0.32
CNOT1-214ENST00000568917 PIK3C2GO75747 1445 aa13.04□□□□□ -0.32
CNOT1-214ENST00000568917 ESF1Q9H501 851 aaKnown RBP13.03□□□□□ -0.32
CNOT1-214ENST00000568917 KIF7Q2M1P5 1343 aa13.03□□□□□ -0.32
CNOT1-214ENST00000568917 EIF3AQ14152 1382 aaKnown RBP13.03□□□□□ -0.32
CNOT1-214ENST00000568917 VGFO15240 615 aaPredicted RBP13.02□□□□□ -0.33
CNOT1-214ENST00000568917 IDI1Q13907 227 aa13.02□□□□□ -0.33
CNOT1-214ENST00000568917 NBPF1Q3BBV0 1214 aa13.02□□□□□ -0.33
CNOT1-214ENST00000568917 PHF12Q96QT6 1004 aa13.02□□□□□ -0.33
CNOT1-214ENST00000568917 CCDC61Q9Y6R9 512 aa13.02□□□□□ -0.33
CNOT1-214ENST00000568917 ST20-MTHFSA0A0A6YYL1 179 aa13.01□□□□□ -0.33
CNOT1-214ENST00000568917 ANP32CO43423 234 aa13.01□□□□□ -0.33
CNOT1-214ENST00000568917 GABBR2O75899 941 aa13.01□□□□□ -0.33
CNOT1-214ENST00000568917 ZMYM3Q14202 1370 aa13.01□□□□□ -0.33
CNOT1-214ENST00000568917 MYO3AQ8NEV4 1616 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms