RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 LTKP29376 864 aa20.95■□□□□ 0.94
COMMD4-221ENST00000567935 TMEM94Q12767 1356 aa20.95■□□□□ 0.94
COMMD4-221ENST00000567935 UBR1Q8IWV7 1749 aa20.94■□□□□ 0.94
COMMD4-221ENST00000567935 NUP155O75694 1391 aa20.94■□□□□ 0.94
COMMD4-221ENST00000567935 ERVK-7P63135 1459 aa20.93■□□□□ 0.94
COMMD4-221ENST00000567935 RPRD2Q5VT52 1461 aaKnown RBP20.93■□□□□ 0.94
COMMD4-221ENST00000567935 JCADQ9P266 1359 aa20.92■□□□□ 0.94
COMMD4-221ENST00000567935 LRP6O75581 1613 aa20.92■□□□□ 0.94
COMMD4-221ENST00000567935 ARHGAP23Q9P227 1491 aa20.91■□□□□ 0.94
COMMD4-221ENST00000567935 PHLPP1O60346 1717 aa20.9■□□□□ 0.94
COMMD4-221ENST00000567935 RBM33Q96EV2 1170 aaKnown RBP20.9■□□□□ 0.94
COMMD4-221ENST00000567935 TXNDC2Q86VQ3 553 aa20.89■□□□□ 0.93
COMMD4-221ENST00000567935 ABCC3O15438 1527 aa20.88■□□□□ 0.93
COMMD4-221ENST00000567935 SLIT1O75093 1534 aa20.88■□□□□ 0.93
COMMD4-221ENST00000567935 DIEXFQ68CQ4 756 aaKnown RBP20.88■□□□□ 0.93
COMMD4-221ENST00000567935 IQGAP3Q86VI3 1631 aa20.87■□□□□ 0.93
COMMD4-221ENST00000567935 ZNF772Q68DY9 489 aaPredicted RBP20.85■□□□□ 0.93
COMMD4-221ENST00000567935 COL16A1Q07092 1604 aaPredicted RBP20.84■□□□□ 0.93
COMMD4-221ENST00000567935 EIF2AK4Q9P2K8 1649 aaKnown RBP20.83■□□□□ 0.93
COMMD4-221ENST00000567935 MEX3CQ5U5Q3 659 aaKnown RBP20.82■□□□□ 0.92
COMMD4-221ENST00000567935 PROSER2Q86WR7 435 aaPredicted RBP20.81■□□□□ 0.92
COMMD4-221ENST00000567935 KCNA6P17658 529 aa20.8■□□□□ 0.92
COMMD4-221ENST00000567935 RXRBP28702 533 aa20.8■□□□□ 0.92
COMMD4-221ENST00000567935 FOXD1Q16676 465 aa20.8■□□□□ 0.92
COMMD4-221ENST00000567935 PRDM15P57071 1507 aaPredicted RBP20.79■□□□□ 0.92
COMMD4-221ENST00000567935 SPATA31A6Q5VVP1 1343 aa20.78■□□□□ 0.92
COMMD4-221ENST00000567935 CDK12Q9NYV4 1490 aaPredicted RBP20.78■□□□□ 0.92
COMMD4-221ENST00000567935 SLAIN2Q9P270 581 aa20.78■□□□□ 0.92
COMMD4-221ENST00000567935 EID1Q9Y6B2 187 aa20.78■□□□□ 0.92
COMMD4-221ENST00000567935 CFAP65Q6ZU64 1925 aaKnown RBP20.77■□□□□ 0.92
COMMD4-221ENST00000567935 MSH6P52701 1360 aa20.76■□□□□ 0.91
COMMD4-221ENST00000567935 MROH1Q8NDA8 1641 aa20.75■□□□□ 0.91
COMMD4-221ENST00000567935 CEP152O94986 1710 aa20.75■□□□□ 0.91
COMMD4-221ENST00000567935 TMEM2Q9UHN6 1383 aa20.74■□□□□ 0.91
COMMD4-221ENST00000567935 L3MBTL2Q969R5 705 aa20.74■□□□□ 0.91
COMMD4-221ENST00000567935 SLC26A8Q96RN1 970 aa20.74■□□□□ 0.91
COMMD4-221ENST00000567935 NKTRP30414 1462 aaKnown RBP20.74■□□□□ 0.91
COMMD4-221ENST00000567935 NWD1Q149M9 1564 aa20.73■□□□□ 0.91
COMMD4-221ENST00000567935 KANK1Q14678 1352 aa20.72■□□□□ 0.91
COMMD4-221ENST00000567935 TET3O43151 1660 aa20.72■□□□□ 0.91
COMMD4-221ENST00000567935 PIK3C2BO00750 1634 aa20.71■□□□□ 0.91
COMMD4-221ENST00000567935 RGS12O14924 1447 aa20.7■□□□□ 0.9
COMMD4-221ENST00000567935 SHPRHQ149N8 1683 aa20.7■□□□□ 0.9
COMMD4-221ENST00000567935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.68■□□□□ 0.9
COMMD4-221ENST00000567935 CCDC144AA2RUR9 1427 aa20.68■□□□□ 0.9
COMMD4-221ENST00000567935 AFF2P51816 1311 aa20.66■□□□□ 0.9
COMMD4-221ENST00000567935 KDM5AP29375 1690 aaKnown RBP20.66■□□□□ 0.9
COMMD4-221ENST00000567935 AHDC1Q5TGY3 1603 aaPredicted RBP20.65■□□□□ 0.9
COMMD4-221ENST00000567935 SETBP1Q9Y6X0 1596 aa20.65■□□□□ 0.9
COMMD4-221ENST00000567935 NUTM2BA6NNL0 878 aaPredicted RBP20.64■□□□□ 0.89
COMMD4-221ENST00000567935 NUTM2EB1AL46 878 aaPredicted RBP20.64■□□□□ 0.89
COMMD4-221ENST00000567935 NUTM2AQ8IVF1 878 aaPredicted RBP20.64■□□□□ 0.89
COMMD4-221ENST00000567935 EFCAB6Q5THR3 1501 aa20.63■□□□□ 0.89
COMMD4-221ENST00000567935 LMTK2Q8IWU2 1503 aa20.63■□□□□ 0.89
COMMD4-221ENST00000567935 ARHGAP31Q2M1Z3 1444 aa20.63■□□□□ 0.89
COMMD4-221ENST00000567935 STAG3Q9UJ98 1225 aa20.62■□□□□ 0.89
COMMD4-221ENST00000567935 DIP2AQ14689 1571 aa20.61■□□□□ 0.89
COMMD4-221ENST00000567935 NUTM2DQ5VT03 806 aaPredicted RBP20.61■□□□□ 0.89
COMMD4-221ENST00000567935 E9PCH4 1651 aa20.61■□□□□ 0.89
COMMD4-221ENST00000567935 TRPM2O94759 1503 aa20.59■□□□□ 0.89
COMMD4-221ENST00000567935 ZRANB1Q9UGI0 708 aa20.59■□□□□ 0.89
COMMD4-221ENST00000567935 EIF4G2P78344 907 aaKnown RBP eCLIP20.58■□□□□ 0.89
COMMD4-221ENST00000567935 RBM6P78332 1123 aaKnown RBP20.57■□□□□ 0.88
COMMD4-221ENST00000567935 SPHKAPQ2M3C7 1700 aa20.57■□□□□ 0.88
COMMD4-221ENST00000567935 IDI1Q13907 227 aa20.56■□□□□ 0.88
COMMD4-221ENST00000567935 NBPF8Q3BBV2 869 aa20.55■□□□□ 0.88
COMMD4-221ENST00000567935 QTRT2Q9H974 415 aaKnown RBP20.55■□□□□ 0.88
COMMD4-221ENST00000567935 RALGAPBQ86X10 1494 aa20.55■□□□□ 0.88
COMMD4-221ENST00000567935 BCANQ96GW7 911 aa20.54■□□□□ 0.88
COMMD4-221ENST00000567935 STAC3Q96MF2 364 aa20.54■□□□□ 0.88
COMMD4-221ENST00000567935 CHD2O14647 1828 aaKnown RBP20.54■□□□□ 0.88
COMMD4-221ENST00000567935 ATAD2Q6PL18 1390 aa20.53■□□□□ 0.88
COMMD4-221ENST00000567935 C8orf37Q96NL8 207 aa20.52■□□□□ 0.88
COMMD4-221ENST00000567935 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.52■□□□□ 0.88
COMMD4-221ENST00000567935 C14orf37Q86TY3 774 aa20.51■□□□□ 0.87
COMMD4-221ENST00000567935 ADGRB3O60242 1522 aa20.51■□□□□ 0.87
COMMD4-221ENST00000567935 NCOA3Q9Y6Q9 1424 aa20.51■□□□□ 0.87
COMMD4-221ENST00000567935 HSPA5P11021 654 aaKnown RBP20.5■□□□□ 0.87
COMMD4-221ENST00000567935 BRINP3Q76B58 766 aa20.5■□□□□ 0.87
COMMD4-221ENST00000567935 CADPS2Q86UW7 1296 aa20.49■□□□□ 0.87
COMMD4-221ENST00000567935 SPATA31E1Q6ZUB1 1445 aa20.48■□□□□ 0.87
COMMD4-221ENST00000567935 ATF3P18847 181 aa20.46■□□□□ 0.87
COMMD4-221ENST00000567935 MIER1Q8N108 512 aa20.46■□□□□ 0.87
COMMD4-221ENST00000567935 DCAF11Q8TEB1 546 aa20.46■□□□□ 0.87
COMMD4-221ENST00000567935 PLEKHG1Q9ULL1 1385 aa20.46■□□□□ 0.87
COMMD4-221ENST00000567935 PRAG1Q86YV5 1406 aa20.45■□□□□ 0.86
COMMD4-221ENST00000567935 C19orf44Q9H6X5 657 aa20.45■□□□□ 0.86
COMMD4-221ENST00000567935 CLTCL1P53675 1640 aa20.45■□□□□ 0.86
COMMD4-221ENST00000567935 LAMC1P11047 1609 aa20.44■□□□□ 0.86
COMMD4-221ENST00000567935 ZFYVE9O95405 1425 aa20.44■□□□□ 0.86
COMMD4-221ENST00000567935 ASXL1Q8IXJ9 1541 aa20.43■□□□□ 0.86
COMMD4-221ENST00000567935 NGLY1Q96IV0 654 aa20.43■□□□□ 0.86
COMMD4-221ENST00000567935 EP400Q96L91 3159 aa20.42■□□□□ 0.86
COMMD4-221ENST00000567935 NOS1P29475 1434 aa20.42■□□□□ 0.86
COMMD4-221ENST00000567935 TRPM1Q7Z4N2 1603 aa20.42■□□□□ 0.86
COMMD4-221ENST00000567935 PNPLA6Q8IY17 1366 aa20.41■□□□□ 0.86
COMMD4-221ENST00000567935 USP47Q96K76 1375 aa20.41■□□□□ 0.86
COMMD4-221ENST00000567935 KIF1BO60333 1816 aa20.4■□□□□ 0.86
COMMD4-221ENST00000567935 ZNF326Q5BKZ1 582 aaKnown RBP20.4■□□□□ 0.86
COMMD4-221ENST00000567935 GPRASP1Q5JY77 1395 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms