RNA–Protein interactions for RNA: ENST00000567379.5

VPS9D1-206, Transcript of VPS9 domain containing 1, humanhuman

TSL 5

Gene VPS9D1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-206ENST00000567379 SYNMO15061 1565 aa15.17■□□□□ 0.02
VPS9D1-206ENST00000567379 MYOM2P54296 1465 aa15.17■□□□□ 0.02
VPS9D1-206ENST00000567379 ESF1Q9H501 851 aaKnown RBP15.17■□□□□ 0.02
VPS9D1-206ENST00000567379 SLC52A1Q9NWF4 448 aa15.17■□□□□ 0.02
VPS9D1-206ENST00000567379 WASHC2AQ641Q2 1341 aa15.17■□□□□ 0.02
VPS9D1-206ENST00000567379 RPGRIP1LQ68CZ1 1315 aa15.17■□□□□ 0.02
VPS9D1-206ENST00000567379 CCDC7Q96M83 1385 aa15.16■□□□□ 0.02
VPS9D1-206ENST00000567379 MLECQ14165 292 aa15.16■□□□□ 0.02
VPS9D1-206ENST00000567379 IFT172Q9UG01 1749 aa15.16■□□□□ 0.02
VPS9D1-206ENST00000567379 KIAA1210Q9ULL0 1709 aa15.14■□□□□ 0.01
VPS9D1-206ENST00000567379 NBPF1Q3BBV0 1214 aa15.14■□□□□ 0.01
VPS9D1-206ENST00000567379 ERVK-7P63135 1459 aa15.13■□□□□ 0.01
VPS9D1-206ENST00000567379 PPLO60437 1756 aa15.12■□□□□ 0.01
VPS9D1-206ENST00000567379 ST20-MTHFSA0A0A6YYL1 179 aa15.11■□□□□ 0.01
VPS9D1-206ENST00000567379 C11orf95C9JLR9 678 aaPredicted RBP15.11■□□□□ 0.01
VPS9D1-206ENST00000567379 KIF7Q2M1P5 1343 aa15.11■□□□□ 0.01
VPS9D1-206ENST00000567379 ANP32CO43423 234 aa15.1■□□□□ 0.01
VPS9D1-206ENST00000567379 IDI1Q13907 227 aa15.1■□□□□ 0.01
VPS9D1-206ENST00000567379 DMRT2Q9Y5R5 561 aa15.1■□□□□ 0.01
VPS9D1-206ENST00000567379 NRXN1Q9ULB1 1477 aa15.09■□□□□ 0.01
VPS9D1-206ENST00000567379 FBXO31Q5XUX0 539 aaPredicted RBP15.09■□□□□ 0.01
VPS9D1-206ENST00000567379 ADGRF5Q8IZF2 1346 aa15.08■□□□□ 0
VPS9D1-206ENST00000567379 IQSEC2Q5JU85 1478 aa15.08■□□□□ 0
VPS9D1-206ENST00000567379 IQGAP1P46940 1657 aa15.07■□□□□ 0
VPS9D1-206ENST00000567379 VGFO15240 615 aaPredicted RBP15.07■□□□□ 0
VPS9D1-206ENST00000567379 PLPPR3Q6T4P5 718 aa15.07■□□□□ 0
VPS9D1-206ENST00000567379 ZMYM3Q14202 1370 aa15.07■□□□□ 0
VPS9D1-206ENST00000567379 TMEM131LA2VDJ0 1609 aa15.06■□□□□ 0
VPS9D1-206ENST00000567379 SCAF11Q99590 1463 aaKnown RBP15.06■□□□□ 0
VPS9D1-206ENST00000567379 POLR3GLQ9BT43 218 aa15.05■□□□□ -0
VPS9D1-206ENST00000567379 STAG3Q9UJ98 1225 aa15.05■□□□□ -0
VPS9D1-206ENST00000567379 EIF3AQ14152 1382 aaKnown RBP15.05■□□□□ -0
VPS9D1-206ENST00000567379 NEXMIFQ5QGS0 1516 aa15.05■□□□□ -0
VPS9D1-206ENST00000567379 MYO5BQ9ULV0 1848 aa15.04■□□□□ -0
VPS9D1-206ENST00000567379 CFAP70Q5T0N1 1121 aa15.04■□□□□ -0
VPS9D1-206ENST00000567379 FER1L4A9Z1Z3 1794 aa15.03■□□□□ -0
VPS9D1-206ENST00000567379 STRCQ7RTU9 1775 aa15.03■□□□□ -0
VPS9D1-206ENST00000567379 SETBP1Q9Y6X0 1596 aa15.03■□□□□ -0
VPS9D1-206ENST00000567379 PIK3C2GO75747 1445 aa15.03■□□□□ -0
VPS9D1-206ENST00000567379 ZFYVE9O95405 1425 aa15.03■□□□□ -0
VPS9D1-206ENST00000567379 TMF1P82094 1093 aa15.02■□□□□ -0
VPS9D1-206ENST00000567379 C14orf93Q9H972 538 aaKnown RBP15.02■□□□□ -0
VPS9D1-206ENST00000567379 CCER2I3L3R5 266 aa15.01□□□□□ -0.01
VPS9D1-206ENST00000567379 TNRQ92752 1358 aa15□□□□□ -0.01
VPS9D1-206ENST00000567379 SLC24A1O60721 1099 aa15□□□□□ -0.01
VPS9D1-206ENST00000567379 TESK2Q96S53 571 aa15□□□□□ -0.01
VPS9D1-206ENST00000567379 CENPBP07199 599 aaPredicted RBP14.98□□□□□ -0.01
VPS9D1-206ENST00000567379 LTBP4Q8N2S1 1624 aa14.98□□□□□ -0.01
VPS9D1-206ENST00000567379 A2ML1A8K2U0 1454 aa14.97□□□□□ -0.01
VPS9D1-206ENST00000567379 CDCA8Q53HL2 280 aa14.97□□□□□ -0.01
VPS9D1-206ENST00000567379 NUTM2DQ5VT03 806 aaPredicted RBP14.97□□□□□ -0.01
VPS9D1-206ENST00000567379 YTHDC1Q96MU7 727 aaKnown RBP14.96□□□□□ -0.01
VPS9D1-206ENST00000567379 KDM5AP29375 1690 aaKnown RBP14.96□□□□□ -0.01
VPS9D1-206ENST00000567379 RIMS2Q9UQ26 1411 aa14.95□□□□□ -0.02
VPS9D1-206ENST00000567379 HDGFP51858 240 aaKnown RBP14.95□□□□□ -0.02
VPS9D1-206ENST00000567379 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.95□□□□□ -0.02
VPS9D1-206ENST00000567379 ADGRB1O14514 1584 aa14.94□□□□□ -0.02
VPS9D1-206ENST00000567379 MYO3AQ8NEV4 1616 aa14.94□□□□□ -0.02
VPS9D1-206ENST00000567379 C3P01024 1663 aa14.93□□□□□ -0.02
VPS9D1-206ENST00000567379 NLRP1Q9C000 1473 aa14.93□□□□□ -0.02
VPS9D1-206ENST00000567379 TMEM132EQ6IEE7 984 aa14.92□□□□□ -0.02
VPS9D1-206ENST00000567379 MED1Q15648 1581 aaPredicted RBP14.92□□□□□ -0.02
VPS9D1-206ENST00000567379 CENPJQ9HC77 1338 aaPredicted RBP14.92□□□□□ -0.02
VPS9D1-206ENST00000567379 SBNO2Q9Y2G9 1366 aa14.91□□□□□ -0.02
VPS9D1-206ENST00000567379 PRKRIP1Q9H875 184 aaPredicted RBP14.91□□□□□ -0.02
VPS9D1-206ENST00000567379 TRAK1Q9UPV9 953 aa14.91□□□□□ -0.02
VPS9D1-206ENST00000567379 UBR1Q8IWV7 1749 aa14.9□□□□□ -0.02
VPS9D1-206ENST00000567379 ALKQ9UM73 1620 aa14.89□□□□□ -0.03
VPS9D1-206ENST00000567379 CEBPAP49715 358 aaPredicted RBP14.89□□□□□ -0.03
VPS9D1-206ENST00000567379 QRICH2Q9H0J4 1663 aa14.88□□□□□ -0.03
VPS9D1-206ENST00000567379 SETD1BQ9UPS6 1966 aaKnown RBP14.88□□□□□ -0.03
VPS9D1-206ENST00000567379 ARHGEF28Q8N1W1 1705 aaKnown RBP14.87□□□□□ -0.03
VPS9D1-206ENST00000567379 TMEM2Q9UHN6 1383 aa14.86□□□□□ -0.03
VPS9D1-206ENST00000567379 ASXL1Q8IXJ9 1541 aa14.86□□□□□ -0.03
VPS9D1-206ENST00000567379 KTN1Q86UP2 1357 aaKnown RBP14.85□□□□□ -0.03
VPS9D1-206ENST00000567379 UBAP1LF5GYI3 381 aa14.85□□□□□ -0.03
VPS9D1-206ENST00000567379 YTHDC2Q9H6S0 1430 aaKnown RBP14.84□□□□□ -0.03
VPS9D1-206ENST00000567379 SENP3Q9H4L4 574 aaPredicted RBP14.84□□□□□ -0.03
VPS9D1-206ENST00000567379 PANK3Q9H999 370 aa14.84□□□□□ -0.03
VPS9D1-206ENST00000567379 RALBP1Q15311 655 aa14.83□□□□□ -0.04
VPS9D1-206ENST00000567379 STK26Q9P289 416 aa14.83□□□□□ -0.04
VPS9D1-206ENST00000567379 EID1Q9Y6B2 187 aa14.82□□□□□ -0.04
VPS9D1-206ENST00000567379 SETD1AO15047 1707 aaKnown RBP14.81□□□□□ -0.04
VPS9D1-206ENST00000567379 PER1O15534 1290 aaPredicted RBP14.81□□□□□ -0.04
VPS9D1-206ENST00000567379 THEMISQ8N1K5 641 aaPredicted RBP14.81□□□□□ -0.04
VPS9D1-206ENST00000567379 BCANQ96GW7 911 aa14.81□□□□□ -0.04
VPS9D1-206ENST00000567379 PUS7Q96PZ0 661 aaKnown RBP14.81□□□□□ -0.04
VPS9D1-206ENST00000567379 EVC2Q86UK5 1308 aa14.81□□□□□ -0.04
VPS9D1-206ENST00000567379 LRPPRCP42704 1394 aaKnown RBP14.81□□□□□ -0.04
VPS9D1-206ENST00000567379 NRXN3Q9Y4C0 1643 aa14.81□□□□□ -0.04
VPS9D1-206ENST00000567379 MYOM1P52179 1685 aa14.81□□□□□ -0.04
VPS9D1-206ENST00000567379 PHF23Q9BUL5 403 aaPredicted RBP14.8□□□□□ -0.04
VPS9D1-206ENST00000567379 POGKQ9P215 609 aa14.8□□□□□ -0.04
VPS9D1-206ENST00000567379 DLC1Q96QB1 1528 aa14.8□□□□□ -0.04
VPS9D1-206ENST00000567379 SLIT1O75093 1534 aa14.79□□□□□ -0.04
VPS9D1-206ENST00000567379 CNGB1Q14028 1251 aaPredicted RBP14.79□□□□□ -0.04
VPS9D1-206ENST00000567379 TXNDC2Q86VQ3 553 aa14.79□□□□□ -0.04
VPS9D1-206ENST00000567379 MRS2Q9HD23 443 aa14.79□□□□□ -0.04
VPS9D1-206ENST00000567379 ARHGAP23Q9P227 1491 aa14.79□□□□□ -0.04
VPS9D1-206ENST00000567379 PLEKHG1Q9ULL1 1385 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms