RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 PDE4CQ08493 712 aa7.64□□□□□ -1.19
CNOT1-211ENST00000567188 RSPH4AQ5TD94 716 aa7.64□□□□□ -1.19
CNOT1-211ENST00000567188 PRM3Q9NNZ6 103 aa7.63□□□□□ -1.19
CNOT1-211ENST00000567188 U2SURPO15042 1029 aaKnown RBP7.63□□□□□ -1.19
CNOT1-211ENST00000567188 SLC26A8Q96RN1 970 aa7.63□□□□□ -1.19
CNOT1-211ENST00000567188 CDC42BPBQ9Y5S2 1711 aa7.63□□□□□ -1.19
CNOT1-211ENST00000567188 PTMAP06454 111 aaKnown RBP7.63□□□□□ -1.19
CNOT1-211ENST00000567188 HMGB1P09429 215 aaKnown RBP7.63□□□□□ -1.19
CNOT1-211ENST00000567188 CDCA8Q53HL2 280 aa7.63□□□□□ -1.19
CNOT1-211ENST00000567188 TMF1P82094 1093 aa7.63□□□□□ -1.19
CNOT1-211ENST00000567188 ZFYVE16Q7Z3T8 1539 aa7.63□□□□□ -1.19
CNOT1-211ENST00000567188 APPP05067 770 aa7.62□□□□□ -1.19
CNOT1-211ENST00000567188 DNTTIP2Q5QJE6 756 aaKnown RBP7.62□□□□□ -1.19
CNOT1-211ENST00000567188 KNSTRNQ9Y448 316 aa7.62□□□□□ -1.19
CNOT1-211ENST00000567188 RRP9O43818 475 aaKnown RBP7.62□□□□□ -1.19
CNOT1-211ENST00000567188 NGDNQ8NEJ9 315 aaKnown RBP7.62□□□□□ -1.19
CNOT1-211ENST00000567188 IPO9Q96P70 1041 aaKnown RBP7.62□□□□□ -1.19
CNOT1-211ENST00000567188 CSB-PGBD3P0DP91 1061 aa7.62□□□□□ -1.19
CNOT1-211ENST00000567188 PMFBP1Q8TBY8 1022 aa7.62□□□□□ -1.19
CNOT1-211ENST00000567188 GOLGA6L6A8MZA4 724 aa7.61□□□□□ -1.19
CNOT1-211ENST00000567188 DNMT1P26358 1616 aaKnown RBP7.61□□□□□ -1.19
CNOT1-211ENST00000567188 CEP152O94986 1710 aa7.61□□□□□ -1.19
CNOT1-211ENST00000567188 TPM2P07951 284 aa7.61□□□□□ -1.19
CNOT1-211ENST00000567188 CCDC146Q8IYE0 955 aa7.61□□□□□ -1.19
CNOT1-211ENST00000567188 CLTCQ00610 1675 aaKnown RBP7.61□□□□□ -1.19
CNOT1-211ENST00000567188 YEATS2Q9ULM3 1422 aa7.61□□□□□ -1.19
CNOT1-211ENST00000567188 POGZQ7Z3K3 1410 aa7.6□□□□□ -1.19
CNOT1-211ENST00000567188 DNAJC5Q9H3Z4 198 aa7.6□□□□□ -1.19
CNOT1-211ENST00000567188 ATP7AQ04656 1500 aa7.6□□□□□ -1.19
CNOT1-211ENST00000567188 ESCO1Q5FWF5 840 aa7.6□□□□□ -1.19
CNOT1-211ENST00000567188 MRS2Q9HD23 443 aa7.6□□□□□ -1.19
CNOT1-211ENST00000567188 SHROOM2Q13796 1616 aa7.59□□□□□ -1.19
CNOT1-211ENST00000567188 MIA2Q96PC5 1412 aa7.59□□□□□ -1.19
CNOT1-211ENST00000567188 FAM43AQ8N2R8 423 aa7.59□□□□□ -1.19
CNOT1-211ENST00000567188 PHF23Q9BUL5 403 aaPredicted RBP7.59□□□□□ -1.19
CNOT1-211ENST00000567188 CROCC2H7BZ55 1655 aa7.59□□□□□ -1.19
CNOT1-211ENST00000567188 KDM5BQ9UGL1 1544 aa7.59□□□□□ -1.19
CNOT1-211ENST00000567188 WAPLQ7Z5K2 1190 aa7.59□□□□□ -1.19
CNOT1-211ENST00000567188 ZNF518AQ6AHZ1 1483 aa7.59□□□□□ -1.2
CNOT1-211ENST00000567188 MORC1Q86VD1 984 aa7.58□□□□□ -1.2
CNOT1-211ENST00000567188 DUOX2Q9NRD8 1548 aa7.58□□□□□ -1.2
CNOT1-211ENST00000567188 TULP1O00294 542 aaPredicted RBP7.58□□□□□ -1.2
CNOT1-211ENST00000567188 NBPF1Q3BBV0 1214 aa7.58□□□□□ -1.2
CNOT1-211ENST00000567188 CFAP70Q5T0N1 1121 aa7.58□□□□□ -1.2
CNOT1-211ENST00000567188 HDGFL2Q7Z4V5 671 aaPredicted RBP7.58□□□□□ -1.2
CNOT1-211ENST00000567188 CCER2I3L3R5 266 aa7.58□□□□□ -1.2
CNOT1-211ENST00000567188 PRAM1Q96QH2 718 aa7.58□□□□□ -1.2
CNOT1-211ENST00000567188 ATF3P18847 181 aa7.58□□□□□ -1.2
CNOT1-211ENST00000567188 GSE1Q14687 1217 aa7.58□□□□□ -1.2
CNOT1-211ENST00000567188 ANO8Q9HCE9 1232 aaPredicted RBP7.58□□□□□ -1.2
CNOT1-211ENST00000567188 GOLGA6L1Q8N7Z2 621 aa7.58□□□□□ -1.2
CNOT1-211ENST00000567188 A2MP01023 1474 aa7.57□□□□□ -1.2
CNOT1-211ENST00000567188 NRDCO43847 1150 aa7.57□□□□□ -1.2
CNOT1-211ENST00000567188 CHMP4BQ9H444 224 aaKnown RBP7.57□□□□□ -1.2
CNOT1-211ENST00000567188 PSME1Q06323 249 aa7.57□□□□□ -1.2
CNOT1-211ENST00000567188 PROSER2Q86WR7 435 aaPredicted RBP7.57□□□□□ -1.2
CNOT1-211ENST00000567188 SETQ01105 290 aaPredicted RBP7.57□□□□□ -1.2
CNOT1-211ENST00000567188 ST20-MTHFSA0A0A6YYL1 179 aa7.56□□□□□ -1.2
CNOT1-211ENST00000567188 EVA1CP58658 441 aa7.56□□□□□ -1.2
CNOT1-211ENST00000567188 TSPYL1Q9H0U9 437 aa7.56□□□□□ -1.2
CNOT1-211ENST00000567188 HECW2Q9P2P5 1572 aa7.56□□□□□ -1.2
CNOT1-211ENST00000567188 EIF3AQ14152 1382 aaKnown RBP7.56□□□□□ -1.2
CNOT1-211ENST00000567188 GOLGA2Q08379 1002 aa7.56□□□□□ -1.2
CNOT1-211ENST00000567188 MAST1Q9Y2H9 1570 aa7.56□□□□□ -1.2
CNOT1-211ENST00000567188 TCERG1O14776 1098 aaKnown RBP7.56□□□□□ -1.2
CNOT1-211ENST00000567188 CCDC66A2RUB6 948 aa7.56□□□□□ -1.2
CNOT1-211ENST00000567188 HOMEZQ8IX15 550 aa7.56□□□□□ -1.2
CNOT1-211ENST00000567188 RIMS1Q86UR5 1692 aaKnown RBP7.55□□□□□ -1.2
CNOT1-211ENST00000567188 CSPP1Q1MSJ5 1256 aa7.55□□□□□ -1.2
CNOT1-211ENST00000567188 ABCC10Q5T3U5 1492 aa7.55□□□□□ -1.2
CNOT1-211ENST00000567188 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.55□□□□□ -1.2
CNOT1-211ENST00000567188 KIAA1107Q9UPP5 1409 aa7.55□□□□□ -1.2
CNOT1-211ENST00000567188 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.55□□□□□ -1.23e-6■□□□□ 9.8
CNOT1-211ENST00000567188 NOS1P29475 1434 aa7.55□□□□□ -1.2
CNOT1-211ENST00000567188 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-211ENST00000567188 ZNF428Q96B54 188 aa7.55□□□□□ -1.2
CNOT1-211ENST00000567188 CFAP44Q96MT7 982 aa7.55□□□□□ -1.2
CNOT1-211ENST00000567188 PANK3Q9H999 370 aa7.55□□□□□ -1.2
CNOT1-211ENST00000567188 VGFO15240 615 aaPredicted RBP7.54□□□□□ -1.2
CNOT1-211ENST00000567188 KIAA2012Q0VF49 1180 aa7.54□□□□□ -1.2
CNOT1-211ENST00000567188 NAIPQ13075 1403 aa7.54□□□□□ -1.2
CNOT1-211ENST00000567188 UHRF1BP1LA0JNW5 1464 aa7.54□□□□□ -1.2
CNOT1-211ENST00000567188 CDK19Q9BWU1 502 aa7.54□□□□□ -1.2
CNOT1-211ENST00000567188 ZNF330Q9Y3S2 320 aaPredicted RBP7.54□□□□□ -1.2
CNOT1-211ENST00000567188 ANKLE2Q86XL3 938 aa7.54□□□□□ -1.2
CNOT1-211ENST00000567188 MYH16Q9H6N6 1097 aa7.54□□□□□ -1.2
CNOT1-211ENST00000567188 UGGT1Q9NYU2 1555 aa7.54□□□□□ -1.2
CNOT1-211ENST00000567188 GCC2Q8IWJ2 1684 aa7.53□□□□□ -1.2
CNOT1-211ENST00000567188 MS4A1P11836 297 aa7.53□□□□□ -1.2
CNOT1-211ENST00000567188 DDX17Q92841 729 aaKnown RBP7.53□□□□□ -1.2
CNOT1-211ENST00000567188 ATP10AO60312 1499 aa7.53□□□□□ -1.2
CNOT1-211ENST00000567188 ABCC1P33527 1531 aa7.53□□□□□ -1.2
CNOT1-211ENST00000567188 USP47Q96K76 1375 aa7.53□□□□□ -1.2
CNOT1-211ENST00000567188 TAF7LQ5H9L4 462 aa7.53□□□□□ -1.2
CNOT1-211ENST00000567188 ADGRF5Q8IZF2 1346 aa7.52□□□□□ -1.2
CNOT1-211ENST00000567188 TNRQ92752 1358 aa7.52□□□□□ -1.21
CNOT1-211ENST00000567188 ARHGEF12Q9NZN5 1544 aa7.52□□□□□ -1.21
CNOT1-211ENST00000567188 RRP7AQ9Y3A4 280 aaKnown RBP7.52□□□□□ -1.21
CNOT1-211ENST00000567188 TCOF1Q13428 1488 aaKnown RBP7.52□□□□□ -1.21
CNOT1-211ENST00000567188 NBPF8Q3BBV2 869 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms