RNA–Protein interactions for RNA: ENST00000565205.5

TRAPPC2L-209, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 1 (best)

Gene TRAPPC2L, Length 1,084 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-209ENST00000565205 IDI1Q13907 227 aa19.48■□□□□ 0.71
TRAPPC2L-209ENST00000565205 SCAF11Q99590 1463 aaKnown RBP19.48■□□□□ 0.71
TRAPPC2L-209ENST00000565205 ARHGAP23Q9P227 1491 aa19.47■□□□□ 0.71
TRAPPC2L-209ENST00000565205 EID1Q9Y6B2 187 aa19.45■□□□□ 0.7
TRAPPC2L-209ENST00000565205 SPHKAPQ2M3C7 1700 aa19.44■□□□□ 0.7
TRAPPC2L-209ENST00000565205 TMEM2Q9UHN6 1383 aa19.44■□□□□ 0.7
TRAPPC2L-209ENST00000565205 TRIM52Q96A61 297 aa19.43■□□□□ 0.7
TRAPPC2L-209ENST00000565205 TXNDC2Q86VQ3 553 aa19.42■□□□□ 0.7
TRAPPC2L-209ENST00000565205 MYO5BQ9ULV0 1848 aa19.41■□□□□ 0.7
TRAPPC2L-209ENST00000565205 TMEM131LA2VDJ0 1609 aa19.4■□□□□ 0.7
TRAPPC2L-209ENST00000565205 ACIN1Q9UKV3 1341 aaKnown RBP19.38■□□□□ 0.69
TRAPPC2L-209ENST00000565205 CHGAP10645 457 aaKnown RBP19.37■□□□□ 0.69
TRAPPC2L-209ENST00000565205 LTKP29376 864 aa19.37■□□□□ 0.69
TRAPPC2L-209ENST00000565205 HDGFP51858 240 aaKnown RBP19.36■□□□□ 0.69
TRAPPC2L-209ENST00000565205 SLC4A1APQ9BWU0 796 aaKnown RBP19.36■□□□□ 0.69
TRAPPC2L-209ENST00000565205 ROBO1Q9Y6N7 1651 aa19.35■□□□□ 0.69
TRAPPC2L-209ENST00000565205 TRPM2O94759 1503 aa19.35■□□□□ 0.69
TRAPPC2L-209ENST00000565205 FAM135BQ49AJ0 1406 aa19.34■□□□□ 0.69
TRAPPC2L-209ENST00000565205 SETD5Q9C0A6 1442 aa19.34■□□□□ 0.69
TRAPPC2L-209ENST00000565205 ZFYVE9O95405 1425 aa19.33■□□□□ 0.68
TRAPPC2L-209ENST00000565205 RIMS2Q9UQ26 1411 aa19.33■□□□□ 0.68
TRAPPC2L-209ENST00000565205 PPP1R15AO75807 674 aaPredicted RBP19.32■□□□□ 0.68
TRAPPC2L-209ENST00000565205 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.31■□□□□ 0.68
TRAPPC2L-209ENST00000565205 RBM33Q96EV2 1170 aaKnown RBP19.31■□□□□ 0.68
TRAPPC2L-209ENST00000565205 CLTCL1P53675 1640 aa19.31■□□□□ 0.68
TRAPPC2L-209ENST00000565205 KIF1BO60333 1816 aa19.3■□□□□ 0.68
TRAPPC2L-209ENST00000565205 UPF1Q92900 1129 aaKnown RBP eCLIP19.29■□□□□ 0.68
TRAPPC2L-209ENST00000565205 BCANQ96GW7 911 aa19.29■□□□□ 0.68
TRAPPC2L-209ENST00000565205 PLEKHG1Q9ULL1 1385 aa19.28■□□□□ 0.68
TRAPPC2L-209ENST00000565205 TMEM94Q12767 1356 aa19.26■□□□□ 0.67
TRAPPC2L-209ENST00000565205 RAB3GAP2Q9H2M9 1393 aa19.26■□□□□ 0.67
TRAPPC2L-209ENST00000565205 MPHOSPH9Q99550 1183 aa19.25■□□□□ 0.67
TRAPPC2L-209ENST00000565205 ZNF326Q5BKZ1 582 aaKnown RBP19.24■□□□□ 0.67
TRAPPC2L-209ENST00000565205 PHLPP1O60346 1717 aa19.24■□□□□ 0.67
TRAPPC2L-209ENST00000565205 SLC26A8Q96RN1 970 aa19.23■□□□□ 0.67
TRAPPC2L-209ENST00000565205 DIP2AQ14689 1571 aa19.23■□□□□ 0.67
TRAPPC2L-209ENST00000565205 LRP6O75581 1613 aa19.22■□□□□ 0.67
TRAPPC2L-209ENST00000565205 CCDC144AA2RUR9 1427 aa19.2■□□□□ 0.66
TRAPPC2L-209ENST00000565205 NUTM2DQ5VT03 806 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC2L-209ENST00000565205 NWD1Q149M9 1564 aa19.19■□□□□ 0.66
TRAPPC2L-209ENST00000565205 FOXD1Q16676 465 aa19.19■□□□□ 0.66
TRAPPC2L-209ENST00000565205 NKTRP30414 1462 aaKnown RBP19.18■□□□□ 0.66
TRAPPC2L-209ENST00000565205 KCNA6P17658 529 aa19.18■□□□□ 0.66
TRAPPC2L-209ENST00000565205 NEXMIFQ5QGS0 1516 aa19.18■□□□□ 0.66
TRAPPC2L-209ENST00000565205 TBX22Q9Y458 520 aa19.17■□□□□ 0.66
TRAPPC2L-209ENST00000565205 COL16A1Q07092 1604 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC2L-209ENST00000565205 CHD2O14647 1828 aaKnown RBP19.16■□□□□ 0.66
TRAPPC2L-209ENST00000565205 SETBP1Q9Y6X0 1596 aa19.16■□□□□ 0.66
TRAPPC2L-209ENST00000565205 ADAMTS13Q76LX8 1427 aa19.16■□□□□ 0.66
TRAPPC2L-209ENST00000565205 HRCP23327 699 aa19.15■□□□□ 0.66
TRAPPC2L-209ENST00000565205 PROSER2Q86WR7 435 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC2L-209ENST00000565205 PIK3R4Q99570 1358 aa19.15■□□□□ 0.66
TRAPPC2L-209ENST00000565205 JCADQ9P266 1359 aa19.15■□□□□ 0.66
TRAPPC2L-209ENST00000565205 RPGRIP1LQ68CZ1 1315 aa19.14■□□□□ 0.65
TRAPPC2L-209ENST00000565205 PPLO60437 1756 aa19.13■□□□□ 0.65
TRAPPC2L-209ENST00000565205 NRXN3Q9Y4C0 1643 aa19.12■□□□□ 0.65
TRAPPC2L-209ENST00000565205 VGFO15240 615 aaPredicted RBP19.12■□□□□ 0.65
TRAPPC2L-209ENST00000565205 SLAIN2Q9P270 581 aa19.1■□□□□ 0.65
TRAPPC2L-209ENST00000565205 SRCAPQ6ZRS2 3230 aa19.1■□□□□ 0.65
TRAPPC2L-209ENST00000565205 SPATA31E1Q6ZUB1 1445 aa19.08■□□□□ 0.64
TRAPPC2L-209ENST00000565205 ANKRD30BQ9BXX2 1392 aa19.06■□□□□ 0.64
TRAPPC2L-209ENST00000565205 IFT172Q9UG01 1749 aa19.05■□□□□ 0.64
TRAPPC2L-209ENST00000565205 RGL3Q3MIN7 710 aa19.05■□□□□ 0.64
TRAPPC2L-209ENST00000565205 MEX3CQ5U5Q3 659 aaKnown RBP19.05■□□□□ 0.64
TRAPPC2L-209ENST00000565205 XRN1Q8IZH2 1706 aaKnown RBP19.05■□□□□ 0.64
TRAPPC2L-209ENST00000565205 MSH6P52701 1360 aa19.05■□□□□ 0.64
TRAPPC2L-209ENST00000565205 ZNF772Q68DY9 489 aaPredicted RBP19.04■□□□□ 0.64
TRAPPC2L-209ENST00000565205 NCOA3Q9Y6Q9 1424 aa19.03■□□□□ 0.64
TRAPPC2L-209ENST00000565205 AMOTL2Q9Y2J4 779 aa19.03■□□□□ 0.64
TRAPPC2L-209ENST00000565205 SHPRHQ149N8 1683 aa19.03■□□□□ 0.64
TRAPPC2L-209ENST00000565205 PTPRUQ92729 1446 aa19.02■□□□□ 0.64
TRAPPC2L-209ENST00000565205 RXRBP28702 533 aa19.02■□□□□ 0.64
TRAPPC2L-209ENST00000565205 C14orf37Q86TY3 774 aa19.02■□□□□ 0.64
TRAPPC2L-209ENST00000565205 SPATA31A6Q5VVP1 1343 aa19.01■□□□□ 0.63
TRAPPC2L-209ENST00000565205 METP08581 1390 aa19.01■□□□□ 0.63
TRAPPC2L-209ENST00000565205 AHDC1Q5TGY3 1603 aaPredicted RBP18.98■□□□□ 0.63
TRAPPC2L-209ENST00000565205 RGS12O14924 1447 aa18.98■□□□□ 0.63
TRAPPC2L-209ENST00000565205 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
TRAPPC2L-209ENST00000565205 NUTM2BA6NNL0 878 aaPredicted RBP18.97■□□□□ 0.63
TRAPPC2L-209ENST00000565205 NUTM2EB1AL46 878 aaPredicted RBP18.97■□□□□ 0.63
TRAPPC2L-209ENST00000565205 NUTM2AQ8IVF1 878 aaPredicted RBP18.97■□□□□ 0.63
TRAPPC2L-209ENST00000565205 ADGRF5Q8IZF2 1346 aa18.97■□□□□ 0.63
TRAPPC2L-209ENST00000565205 MYOM2P54296 1465 aa18.97■□□□□ 0.63
TRAPPC2L-209ENST00000565205 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.95■□□□□ 0.62
TRAPPC2L-209ENST00000565205 PIK3C2GO75747 1445 aa18.95■□□□□ 0.62
TRAPPC2L-209ENST00000565205 PTCH1Q13635 1447 aa18.94■□□□□ 0.62
TRAPPC2L-209ENST00000565205 LAMC1P11047 1609 aa18.94■□□□□ 0.62
TRAPPC2L-209ENST00000565205 AFF2P51816 1311 aa18.94■□□□□ 0.62
TRAPPC2L-209ENST00000565205 C19orf44Q9H6X5 657 aa18.93■□□□□ 0.62
TRAPPC2L-209ENST00000565205 DCCP43146 1447 aa18.92■□□□□ 0.62
TRAPPC2L-209ENST00000565205 PRAG1Q86YV5 1406 aa18.92■□□□□ 0.62
TRAPPC2L-209ENST00000565205 ATF3P18847 181 aa18.92■□□□□ 0.62
TRAPPC2L-209ENST00000565205 CADPS2Q86UW7 1296 aa18.92■□□□□ 0.62
TRAPPC2L-209ENST00000565205 TRIM26Q12899 539 aaPredicted RBP18.91■□□□□ 0.62
TRAPPC2L-209ENST00000565205 NRXN1Q9ULB1 1477 aa18.9■□□□□ 0.62
TRAPPC2L-209ENST00000565205 ADGRL3Q9HAR2 1447 aa18.9■□□□□ 0.62
TRAPPC2L-209ENST00000565205 NALCNQ8IZF0 1738 aa18.89■□□□□ 0.61
TRAPPC2L-209ENST00000565205 KNDC1Q76NI1 1749 aa18.88■□□□□ 0.61
TRAPPC2L-209ENST00000565205 STAC3Q96MF2 364 aa18.88■□□□□ 0.61
TRAPPC2L-209ENST00000565205 BRINP3Q76B58 766 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms