RNA–Protein interactions for RNA: ENST00000563557.1

AC009097.3-201, humanhuman

BASIC

Gene AC009097.3, Length 1,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009097.3-201ENST00000563557 PPP4CP60510 307 aa11.07□□□□□ -0.64
AC009097.3-201ENST00000563557 TMEM134Q9H6X4 195 aa11.07□□□□□ -0.64
AC009097.3-201ENST00000563557 WBP1LQ9NX94 342 aa11.07□□□□□ -0.64
AC009097.3-201ENST00000563557 SLC4A3P48751 1232 aa11.05□□□□□ -0.64
AC009097.3-201ENST00000563557 SLF2Q8IX21 1173 aa11.05□□□□□ -0.64
AC009097.3-201ENST00000563557 PHOX2BQ99453 314 aa11.05□□□□□ -0.64
AC009097.3-201ENST00000563557 RNF40O75150 1001 aa11.04□□□□□ -0.64
AC009097.3-201ENST00000563557 NYAP1Q6ZVC0 841 aa11.02□□□□□ -0.65
AC009097.3-201ENST00000563557 NLRP7Q8WX94 980 aa11.02□□□□□ -0.65
AC009097.3-201ENST00000563557 CCDC102AQ96A19 550 aa11.02□□□□□ -0.65
AC009097.3-201ENST00000563557 DAXXQ9UER7 740 aaPredicted RBP11.01□□□□□ -0.65
AC009097.3-201ENST00000563557 NECTIN2Q92692 538 aa11□□□□□ -0.65
AC009097.3-201ENST00000563557 RSPH4AQ5TD94 716 aa10.97□□□□□ -0.65
AC009097.3-201ENST00000563557 SLC10A3P09131 477 aa10.95□□□□□ -0.66
AC009097.3-201ENST00000563557 MDM2Q00987 491 aaPredicted RBP10.95□□□□□ -0.66
AC009097.3-201ENST00000563557 AK7Q96M32 723 aa10.95□□□□□ -0.66
AC009097.3-201ENST00000563557 APLP1P51693 650 aa10.94□□□□□ -0.66
AC009097.3-201ENST00000563557 DDX11L8A8MPP1 907 aa10.93□□□□□ -0.66
AC009097.3-201ENST00000563557 SLC24A3Q9HC58 644 aa10.93□□□□□ -0.66
AC009097.3-201ENST00000563557 PLA2G2EQ9NZK7 142 aa10.92□□□□□ -0.66
AC009097.3-201ENST00000563557 TRIM66O15016 1216 aa10.91□□□□□ -0.66
AC009097.3-201ENST00000563557 CLCN1P35523 988 aa10.91□□□□□ -0.66
AC009097.3-201ENST00000563557 SULF1Q8IWU6 871 aa10.91□□□□□ -0.66
AC009097.3-201ENST00000563557 RDH13Q8NBN7 331 aa10.91□□□□□ -0.66
AC009097.3-201ENST00000563557 PRR14Q9BWN1 585 aa10.91□□□□□ -0.66
AC009097.3-201ENST00000563557 KMT5BQ4FZB7 885 aa10.9□□□□□ -0.66
AC009097.3-201ENST00000563557 CFHP08603 1231 aa10.89□□□□□ -0.67
AC009097.3-201ENST00000563557 GPCPD1Q9NPB8 672 aa10.89□□□□□ -0.67
AC009097.3-201ENST00000563557 TMUB1Q9BVT8 246 aa10.88□□□□□ -0.67
AC009097.3-201ENST00000563557 AMHR2Q16671 573 aa10.87□□□□□ -0.67
AC009097.3-201ENST00000563557 REPIN1Q9BWE0 567 aaKnown RBP10.87□□□□□ -0.67
AC009097.3-201ENST00000563557 ACTN4O43707 911 aaKnown RBP10.86□□□□□ -0.67
AC009097.3-201ENST00000563557 ITGBL1O95965 494 aaPredicted RBP10.86□□□□□ -0.67
AC009097.3-201ENST00000563557 TJAP1Q5JTD0 557 aa10.86□□□□□ -0.67
AC009097.3-201ENST00000563557 GCGRP47871 477 aa10.85□□□□□ -0.67
AC009097.3-201ENST00000563557 KCNC4Q03721 635 aa10.85□□□□□ -0.67
AC009097.3-201ENST00000563557 TTLL12Q14166 644 aaPredicted RBP10.85□□□□□ -0.67
AC009097.3-201ENST00000563557 MTRQ99707 1265 aa10.85□□□□□ -0.67
AC009097.3-201ENST00000563557 PCDHB3Q9Y5E6 796 aa10.85□□□□□ -0.67
AC009097.3-201ENST00000563557 CD46P15529 392 aa10.84□□□□□ -0.67
AC009097.3-201ENST00000563557 IL21Q9HBE4 155 aa10.84□□□□□ -0.67
AC009097.3-201ENST00000563557 FAM217BQ9NTX9 383 aaPredicted RBP10.84□□□□□ -0.67
AC009097.3-201ENST00000563557 SSTR3P32745 418 aaPredicted RBP10.83□□□□□ -0.68
AC009097.3-201ENST00000563557 IFFO2Q5TF58 517 aa10.83□□□□□ -0.68
AC009097.3-201ENST00000563557 COPS2P61201 443 aa10.82□□□□□ -0.68
AC009097.3-201ENST00000563557 PDE4DQ08499 809 aa10.82□□□□□ -0.68
AC009097.3-201ENST00000563557 ZNF516Q92618 1163 aa10.82□□□□□ -0.68
AC009097.3-201ENST00000563557 TPRNQ4KMQ1 711 aa10.81□□□□□ -0.68
AC009097.3-201ENST00000563557 BLOC1S3Q6QNY0 202 aa10.8□□□□□ -0.68
AC009097.3-201ENST00000563557 GIGYF2Q6Y7W6 1299 aaKnown RBP10.8□□□□□ -0.68
AC009097.3-201ENST00000563557 PARP9Q8IXQ6 854 aa10.79□□□□□ -0.68
AC009097.3-201ENST00000563557 ATP6V1AP38606 617 aa10.78□□□□□ -0.68
AC009097.3-201ENST00000563557 FUT2Q10981 343 aa10.78□□□□□ -0.68
AC009097.3-201ENST00000563557 PUS10Q3MIT2 529 aaKnown RBP10.78□□□□□ -0.68
AC009097.3-201ENST00000563557 ZPR1O75312 459 aa10.77□□□□□ -0.69
AC009097.3-201ENST00000563557 KDM4AO75164 1064 aa10.76□□□□□ -0.69
AC009097.3-201ENST00000563557 NR1I2O75469 434 aa10.76□□□□□ -0.69
AC009097.3-201ENST00000563557 SCUBE3Q8IX30 993 aa10.76□□□□□ -0.69
AC009097.3-201ENST00000563557 GRIPAP1Q4V328 841 aa10.75□□□□□ -0.69
AC009097.3-201ENST00000563557 MORN1Q5T089 497 aa10.74□□□□□ -0.69
AC009097.3-201ENST00000563557 NUTM1Q86Y26 1132 aa10.74□□□□□ -0.69
AC009097.3-201ENST00000563557 NKX2-3Q8TAU0 364 aa10.74□□□□□ -0.69
AC009097.3-201ENST00000563557 USP46P62068 366 aa10.73□□□□□ -0.69
AC009097.3-201ENST00000563557 BEGAINQ9BUH8 593 aa10.73□□□□□ -0.69
AC009097.3-201ENST00000563557 MS4A1P11836 297 aa10.72□□□□□ -0.69
AC009097.3-201ENST00000563557 A0A0G2JS52 829 aa10.71□□□□□ -0.69
AC009097.3-201ENST00000563557 SLC27A5Q9Y2P5 690 aa10.71□□□□□ -0.69
AC009097.3-201ENST00000563557 SPIRE2Q8WWL2 714 aa10.68□□□□□ -0.7
AC009097.3-201ENST00000563557 HOXA2O43364 376 aa10.67□□□□□ -0.7
AC009097.3-201ENST00000563557 PRKCSHP14314 528 aaPredicted RBP10.67□□□□□ -0.7
AC009097.3-201ENST00000563557 TLL1O43897 1013 aa10.66□□□□□ -0.7
AC009097.3-201ENST00000563557 PPP1R18Q6NYC8 613 aa10.66□□□□□ -0.7
AC009097.3-201ENST00000563557 SPSB2Q99619 263 aa10.66□□□□□ -0.7
AC009097.3-201ENST00000563557 GPBP1L1Q9HC44 474 aaPredicted RBP10.66□□□□□ -0.7
AC009097.3-201ENST00000563557 SALL2Q9Y467 1007 aaPredicted RBP10.66□□□□□ -0.7
AC009097.3-201ENST00000563557 FMNL1O95466 1100 aaPredicted RBP10.65□□□□□ -0.7
AC009097.3-201ENST00000563557 ADH1BP00325 375 aa10.65□□□□□ -0.7
AC009097.3-201ENST00000563557 Q3C1V9 767 aa10.65□□□□□ -0.7
AC009097.3-201ENST00000563557 BRICD5Q6PL45 260 aa10.65□□□□□ -0.7
AC009097.3-201ENST00000563557 HLA-CQ95604 372 aa10.65□□□□□ -0.7
AC009097.3-201ENST00000563557 THAP11Q96EK4 314 aa10.65□□□□□ -0.7
AC009097.3-201ENST00000563557 TBC1D2Q9BYX2 928 aa10.65□□□□□ -0.7
AC009097.3-201ENST00000563557 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.65□□□□□ -0.7
AC009097.3-201ENST00000563557 DIXDC1Q155Q3 683 aa10.64□□□□□ -0.71
AC009097.3-201ENST00000563557 KDM4CQ9H3R0 1056 aa10.64□□□□□ -0.71
AC009097.3-201ENST00000563557 NDUFV2P19404 249 aa10.63□□□□□ -0.71
AC009097.3-201ENST00000563557 GGCXP38435 758 aa10.63□□□□□ -0.71
AC009097.3-201ENST00000563557 MOXD2PA6NHM9 499 aa10.62□□□□□ -0.71
AC009097.3-201ENST00000563557 GUCA2AQ02747 115 aa10.62□□□□□ -0.71
AC009097.3-201ENST00000563557 FDX1P10109 184 aa10.61□□□□□ -0.71
AC009097.3-201ENST00000563557 RNF19BQ6ZMZ0 732 aa10.61□□□□□ -0.71
AC009097.3-201ENST00000563557 SLC6A16Q9GZN6 736 aa10.61□□□□□ -0.71
AC009097.3-201ENST00000563557 RGS20O76081 388 aa10.6□□□□□ -0.71
AC009097.3-201ENST00000563557 NEUROD2Q15784 382 aa10.6□□□□□ -0.71
AC009097.3-201ENST00000563557 FAM160A2Q8N612 972 aaPredicted RBP10.6□□□□□ -0.71
AC009097.3-201ENST00000563557 S1PR4O95977 384 aa10.59□□□□□ -0.71
AC009097.3-201ENST00000563557 PCDHGC3Q9UN70 934 aa10.59□□□□□ -0.71
AC009097.3-201ENST00000563557 USB1Q9BQ65 265 aaKnown RBP10.58□□□□□ -0.72
AC009097.3-201ENST00000563557 FAM117AQ9C073 453 aa10.58□□□□□ -0.72
AC009097.3-201ENST00000563557 RNF223E7ERA6 249 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms