RNA–Protein interactions for RNA: ENST00000563510.5

FANCA-211, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-211ENST00000563510 TMEM2Q9UHN6 1383 aa16.77■□□□□ 0.28
FANCA-211ENST00000563510 ADGRB3O60242 1522 aa16.77■□□□□ 0.28
FANCA-211ENST00000563510 LOC105371045A0A1W2PR82 267 aa16.77■□□□□ 0.28
FANCA-211ENST00000563510 LTKP29376 864 aa16.77■□□□□ 0.28
FANCA-211ENST00000563510 RRP7BPQ9NSQ0 103 aa16.77■□□□□ 0.28
FANCA-211ENST00000563510 ANKRD30AQ9BXX3 1397 aa16.77■□□□□ 0.27
FANCA-211ENST00000563510 MYO5BQ9ULV0 1848 aa16.75■□□□□ 0.27
FANCA-211ENST00000563510 STAG3Q9UJ98 1225 aa16.75■□□□□ 0.27
FANCA-211ENST00000563510 NWD1Q149M9 1564 aa16.74■□□□□ 0.27
FANCA-211ENST00000563510 RTN4Q9NQC3 1192 aaKnown RBP16.74■□□□□ 0.27
FANCA-211ENST00000563510 ROBO1Q9Y6N7 1651 aa16.74■□□□□ 0.27
FANCA-211ENST00000563510 TET3O43151 1660 aa16.73■□□□□ 0.27
FANCA-211ENST00000563510 GCC2Q8IWJ2 1684 aa16.73■□□□□ 0.27
FANCA-211ENST00000563510 ADGRL2O95490 1459 aa16.73■□□□□ 0.27
FANCA-211ENST00000563510 NKTRP30414 1462 aaKnown RBP16.73■□□□□ 0.27
FANCA-211ENST00000563510 AMER1Q5JTC6 1135 aaPredicted RBP16.72■□□□□ 0.27
FANCA-211ENST00000563510 RPRD2Q5VT52 1461 aaKnown RBP16.71■□□□□ 0.27
FANCA-211ENST00000563510 NOS1P29475 1434 aa16.7■□□□□ 0.26
FANCA-211ENST00000563510 FAM135BQ49AJ0 1406 aa16.7■□□□□ 0.26
FANCA-211ENST00000563510 CHD2O14647 1828 aaKnown RBP16.7■□□□□ 0.26
FANCA-211ENST00000563510 TMEM94Q12767 1356 aa16.67■□□□□ 0.26
FANCA-211ENST00000563510 IDI1Q13907 227 aa16.67■□□□□ 0.26
FANCA-211ENST00000563510 PHLPP1O60346 1717 aa16.67■□□□□ 0.26
FANCA-211ENST00000563510 UNC13BO14795 1591 aa16.66■□□□□ 0.26
FANCA-211ENST00000563510 KCNA6P17658 529 aa16.66■□□□□ 0.26
FANCA-211ENST00000563510 CHIC2Q9UKJ5 165 aa16.66■□□□□ 0.26
FANCA-211ENST00000563510 SLC52A1Q9NWF4 448 aa16.65■□□□□ 0.26
FANCA-211ENST00000563510 TMEM131LA2VDJ0 1609 aa16.65■□□□□ 0.26
FANCA-211ENST00000563510 ANKRD50Q9ULJ7 1429 aa16.63■□□□□ 0.25
FANCA-211ENST00000563510 PROSER2Q86WR7 435 aaPredicted RBP16.62■□□□□ 0.25
FANCA-211ENST00000563510 SLC26A8Q96RN1 970 aa16.62■□□□□ 0.25
FANCA-211ENST00000563510 E9PCH4 1651 aa16.62■□□□□ 0.25
FANCA-211ENST00000563510 MSH6P52701 1360 aa16.62■□□□□ 0.25
FANCA-211ENST00000563510 ZFYVE9O95405 1425 aa16.62■□□□□ 0.25
FANCA-211ENST00000563510 DIP2AQ14689 1571 aa16.61■□□□□ 0.25
FANCA-211ENST00000563510 PLEKHG1Q9ULL1 1385 aa16.6■□□□□ 0.25
FANCA-211ENST00000563510 IQGAP3Q86VI3 1631 aa16.59■□□□□ 0.25
FANCA-211ENST00000563510 HDGFP51858 240 aaKnown RBP16.58■□□□□ 0.24
FANCA-211ENST00000563510 BCANQ96GW7 911 aa16.58■□□□□ 0.24
FANCA-211ENST00000563510 RGS17Q9UGC6 210 aaPredicted RBP16.58■□□□□ 0.24
FANCA-211ENST00000563510 RIMS2Q9UQ26 1411 aa16.58■□□□□ 0.24
FANCA-211ENST00000563510 COL16A1Q07092 1604 aaPredicted RBP16.56■□□□□ 0.24
FANCA-211ENST00000563510 PPP1R15AO75807 674 aaPredicted RBP16.56■□□□□ 0.24
FANCA-211ENST00000563510 FAM50AQ14320 339 aaKnown RBP16.56■□□□□ 0.24
FANCA-211ENST00000563510 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.56■□□□□ 0.24
FANCA-211ENST00000563510 NCOA3Q9Y6Q9 1424 aa16.55■□□□□ 0.24
FANCA-211ENST00000563510 ZNF219Q9P2Y4 722 aaPredicted RBP16.55■□□□□ 0.24
FANCA-211ENST00000563510 SHPRHQ149N8 1683 aa16.54■□□□□ 0.24
FANCA-211ENST00000563510 SETD1AO15047 1707 aaKnown RBP16.53■□□□□ 0.24
FANCA-211ENST00000563510 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.53■□□□□ 0.24
FANCA-211ENST00000563510 RBM33Q96EV2 1170 aaKnown RBP16.53■□□□□ 0.24
FANCA-211ENST00000563510 TRPM2O94759 1503 aa16.53■□□□□ 0.24
FANCA-211ENST00000563510 JCADQ9P266 1359 aa16.52■□□□□ 0.24
FANCA-211ENST00000563510 SLAIN2Q9P270 581 aa16.52■□□□□ 0.24
FANCA-211ENST00000563510 SPHKAPQ2M3C7 1700 aa16.52■□□□□ 0.24
FANCA-211ENST00000563510 AHDC1Q5TGY3 1603 aaPredicted RBP16.52■□□□□ 0.23
FANCA-211ENST00000563510 ROCK1Q13464 1354 aa16.51■□□□□ 0.23
FANCA-211ENST00000563510 PIK3R4Q99570 1358 aa16.51■□□□□ 0.23
FANCA-211ENST00000563510 TBX22Q9Y458 520 aa16.5■□□□□ 0.23
FANCA-211ENST00000563510 POTEAQ6S8J7 498 aa16.49■□□□□ 0.23
FANCA-211ENST00000563510 ADAMTS13Q76LX8 1427 aa16.48■□□□□ 0.23
FANCA-211ENST00000563510 XRN1Q8IZH2 1706 aaKnown RBP16.48■□□□□ 0.23
FANCA-211ENST00000563510 CHGAP10645 457 aaKnown RBP16.46■□□□□ 0.23
FANCA-211ENST00000563510 C14orf37Q86TY3 774 aa16.46■□□□□ 0.23
FANCA-211ENST00000563510 SPATA31A6Q5VVP1 1343 aa16.45■□□□□ 0.22
FANCA-211ENST00000563510 NRXN3Q9Y4C0 1643 aa16.45■□□□□ 0.22
FANCA-211ENST00000563510 CADPS2Q86UW7 1296 aa16.45■□□□□ 0.22
FANCA-211ENST00000563510 DCCP43146 1447 aa16.45■□□□□ 0.22
FANCA-211ENST00000563510 SETBP1Q9Y6X0 1596 aa16.44■□□□□ 0.22
FANCA-211ENST00000563510 KIF1BO60333 1816 aa16.43■□□□□ 0.22
FANCA-211ENST00000563510 LRP6O75581 1613 aa16.43■□□□□ 0.22
FANCA-211ENST00000563510 NHSL1Q5SYE7 1610 aa16.43■□□□□ 0.22
FANCA-211ENST00000563510 ATF3P18847 181 aa16.42■□□□□ 0.22
FANCA-211ENST00000563510 C19orf44Q9H6X5 657 aa16.42■□□□□ 0.22
FANCA-211ENST00000563510 NUP155O75694 1391 aa16.41■□□□□ 0.22
FANCA-211ENST00000563510 MEX3CQ5U5Q3 659 aaKnown RBP16.39■□□□□ 0.21
FANCA-211ENST00000563510 NUTM2DQ5VT03 806 aaPredicted RBP16.39■□□□□ 0.21
FANCA-211ENST00000563510 ASXL1Q8IXJ9 1541 aa16.39■□□□□ 0.21
FANCA-211ENST00000563510 NALCNQ8IZF0 1738 aa16.39■□□□□ 0.21
FANCA-211ENST00000563510 PTPRUQ92729 1446 aa16.38■□□□□ 0.21
FANCA-211ENST00000563510 ZNF772Q68DY9 489 aaPredicted RBP16.38■□□□□ 0.21
FANCA-211ENST00000563510 AMOTL2Q9Y2J4 779 aa16.37■□□□□ 0.21
FANCA-211ENST00000563510 CLTCL1P53675 1640 aa16.37■□□□□ 0.21
FANCA-211ENST00000563510 NEXMIFQ5QGS0 1516 aa16.35■□□□□ 0.21
FANCA-211ENST00000563510 BRINP3Q76B58 766 aa16.34■□□□□ 0.21
FANCA-211ENST00000563510 SLC24A1O60721 1099 aa16.33■□□□□ 0.2
FANCA-211ENST00000563510 MST1RQ04912 1400 aa16.33■□□□□ 0.2
FANCA-211ENST00000563510 SETD5Q9C0A6 1442 aa16.33■□□□□ 0.2
FANCA-211ENST00000563510 CDK12Q9NYV4 1490 aaPredicted RBP16.33■□□□□ 0.2
FANCA-211ENST00000563510 ADGRL3Q9HAR2 1447 aa16.32■□□□□ 0.2
FANCA-211ENST00000563510 LAMC1P11047 1609 aa16.31■□□□□ 0.2
FANCA-211ENST00000563510 ZNF326Q5BKZ1 582 aaKnown RBP16.31■□□□□ 0.2
FANCA-211ENST00000563510 ITGAEP38570 1179 aa16.3■□□□□ 0.2
FANCA-211ENST00000563510 METP08581 1390 aa16.28■□□□□ 0.2
FANCA-211ENST00000563510 PPLO60437 1756 aa16.28■□□□□ 0.2
FANCA-211ENST00000563510 RXRBP28702 533 aa16.27■□□□□ 0.2
FANCA-211ENST00000563510 TRIM52Q96A61 297 aa16.27■□□□□ 0.2
FANCA-211ENST00000563510 PTCH1Q13635 1447 aa16.27■□□□□ 0.19
FANCA-211ENST00000563510 NUTM2BA6NNL0 878 aaPredicted RBP16.26■□□□□ 0.19
FANCA-211ENST00000563510 NUTM2EB1AL46 878 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms