RNA–Protein interactions for RNA: ENST00000563039.2

SPN-205, Transcript of sialophorin, humanhuman

TSL 5

Gene SPN, Length 1,853 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPN-205ENST00000563039 PTPRMP28827 1452 aa27.53■■■□□ 2
SPN-205ENST00000563039 MYOM2P54296 1465 aa27.53■■■□□ 2
SPN-205ENST00000563039 TRPM1Q7Z4N2 1603 aa27.53■■■□□ 2
SPN-205ENST00000563039 RALGAPBQ86X10 1494 aa27.53■■■□□ 2
SPN-205ENST00000563039 NLRP1Q9C000 1473 aa27.51■■□□□ 1.99
SPN-205ENST00000563039 UBR1Q8IWV7 1749 aa27.51■■□□□ 1.99
SPN-205ENST00000563039 KDM4FA0A1W2PPD8 638 aa27.51■■□□□ 1.99
SPN-205ENST00000563039 STAC3Q96MF2 364 aa27.51■■□□□ 1.99
SPN-205ENST00000563039 NRXN1Q9ULB1 1477 aa27.5■■□□□ 1.99
SPN-205ENST00000563039 SENP3Q9H4L4 574 aaPredicted RBP27.5■■□□□ 1.99
SPN-205ENST00000563039 MYO3AQ8NEV4 1616 aa27.48■■□□□ 1.99
SPN-205ENST00000563039 CFAP70Q5T0N1 1121 aa27.47■■□□□ 1.99
SPN-205ENST00000563039 ROCK2O75116 1388 aaKnown RBP27.45■■□□□ 1.99
SPN-205ENST00000563039 RIMS2Q9UQ26 1411 aa27.45■■□□□ 1.98
SPN-205ENST00000563039 VGFO15240 615 aaPredicted RBP27.44■■□□□ 1.98
SPN-205ENST00000563039 HSPA5P11021 654 aaKnown RBP27.44■■□□□ 1.98
SPN-205ENST00000563039 PIK3C2GO75747 1445 aa27.44■■□□□ 1.98
SPN-205ENST00000563039 ZFYVE9O95405 1425 aa27.44■■□□□ 1.98
SPN-205ENST00000563039 KDM5AP29375 1690 aaKnown RBP27.44■■□□□ 1.98
SPN-205ENST00000563039 CARD11Q9BXL7 1154 aa27.44■■□□□ 1.98
SPN-205ENST00000563039 SETD1BQ9UPS6 1966 aaKnown RBP27.43■■□□□ 1.98
SPN-205ENST00000563039 GPRASP1Q5JY77 1395 aa27.4■■□□□ 1.98
SPN-205ENST00000563039 TMEM2Q9UHN6 1383 aa27.4■■□□□ 1.98
SPN-205ENST00000563039 EIF4G2P78344 907 aaKnown RBP eCLIP27.39■■□□□ 1.982e-13■■□□□ 12.7
SPN-205ENST00000563039 CEP170BQ9Y4F5 1589 aaPredicted RBP27.39■■□□□ 1.97
SPN-205ENST00000563039 LTKP29376 864 aa27.38■■□□□ 1.97
SPN-205ENST00000563039 C14orf93Q9H972 538 aaKnown RBP27.38■■□□□ 1.97
SPN-205ENST00000563039 USP47Q96K76 1375 aa27.37■■□□□ 1.97
SPN-205ENST00000563039 KIAA1210Q9ULL0 1709 aa27.36■■□□□ 1.97
SPN-205ENST00000563039 TMEM132EQ6IEE7 984 aa27.34■■□□□ 1.97
SPN-205ENST00000563039 THEMISQ8N1K5 641 aaPredicted RBP27.33■■□□□ 1.97
SPN-205ENST00000563039 ARHGAP23Q9P227 1491 aa27.31■■□□□ 1.96
SPN-205ENST00000563039 ZNF142P52746 1687 aaPredicted RBP27.31■■□□□ 1.96
SPN-205ENST00000563039 SLIT1O75093 1534 aa27.31■■□□□ 1.96
SPN-205ENST00000563039 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.31■■□□□ 1.96
SPN-205ENST00000563039 LAMC1P11047 1609 aa27.31■■□□□ 1.96
SPN-205ENST00000563039 TXNDC2Q86VQ3 553 aa27.3■■□□□ 1.96
SPN-205ENST00000563039 ADGRB1O14514 1584 aa27.29■■□□□ 1.96
SPN-205ENST00000563039 ST20-MTHFSA0A0A6YYL1 179 aa27.29■■□□□ 1.96
SPN-205ENST00000563039 NRXN3Q9Y4C0 1643 aa27.27■■□□□ 1.96
SPN-205ENST00000563039 ALKQ9UM73 1620 aa27.27■■□□□ 1.96
SPN-205ENST00000563039 C11orf95C9JLR9 678 aaPredicted RBP27.27■■□□□ 1.96
SPN-205ENST00000563039 ASXL1Q8IXJ9 1541 aa27.26■■□□□ 1.95
SPN-205ENST00000563039 IQGAP1P46940 1657 aa27.26■■□□□ 1.95
SPN-205ENST00000563039 HDGFP51858 240 aaKnown RBP27.25■■□□□ 1.95
SPN-205ENST00000563039 SETBP1Q9Y6X0 1596 aa27.25■■□□□ 1.95
SPN-205ENST00000563039 EID1Q9Y6B2 187 aa27.23■■□□□ 1.95
SPN-205ENST00000563039 SCAF11Q99590 1463 aaKnown RBP27.23■■□□□ 1.95
SPN-205ENST00000563039 SETD1AO15047 1707 aaKnown RBP27.23■■□□□ 1.95
SPN-205ENST00000563039 PLEKHG1Q9ULL1 1385 aa27.2■■□□□ 1.95
SPN-205ENST00000563039 TRAK1Q9UPV9 953 aa27.2■■□□□ 1.94
SPN-205ENST00000563039 MIER1Q8N108 512 aa27.19■■□□□ 1.94
SPN-205ENST00000563039 BCANQ96GW7 911 aa27.19■■□□□ 1.94
SPN-205ENST00000563039 ADAMTS13Q76LX8 1427 aa27.19■■□□□ 1.94
SPN-205ENST00000563039 METP08581 1390 aa27.18■■□□□ 1.94
SPN-205ENST00000563039 TESK2Q96S53 571 aa27.17■■□□□ 1.94
SPN-205ENST00000563039 WASHC2AQ641Q2 1341 aa27.17■■□□□ 1.94
SPN-205ENST00000563039 STK26Q9P289 416 aa27.17■■□□□ 1.94
SPN-205ENST00000563039 SLC26A8Q96RN1 970 aa27.16■■□□□ 1.94
SPN-205ENST00000563039 CENPBP07199 599 aaPredicted RBP27.15■■□□□ 1.94
SPN-205ENST00000563039 ANKLE2Q86XL3 938 aa27.14■■□□□ 1.94
SPN-205ENST00000563039 MED14O60244 1454 aa27.13■■□□□ 1.93
SPN-205ENST00000563039 YTHDC2Q9H6S0 1430 aaKnown RBP27.12■■□□□ 1.93
SPN-205ENST00000563039 HSPA2P54652 639 aa27.11■■□□□ 1.93
SPN-205ENST00000563039 NCKAP5LQ9HCH0 1330 aa27.1■■□□□ 1.93
SPN-205ENST00000563039 KIF7Q2M1P5 1343 aa27.1■■□□□ 1.93
SPN-205ENST00000563039 DDX10Q13206 875 aaKnown RBP27.08■■□□□ 1.93
SPN-205ENST00000563039 SCAF1Q9H7N4 1312 aaKnown RBP27.08■■□□□ 1.93
SPN-205ENST00000563039 CCDC7Q96M83 1385 aa27.08■■□□□ 1.93
SPN-205ENST00000563039 ARHGEF28Q8N1W1 1705 aaKnown RBP27.08■■□□□ 1.93
SPN-205ENST00000563039 LMTK3Q96Q04 1460 aa27.07■■□□□ 1.92
SPN-205ENST00000563039 EIF3AQ14152 1382 aaKnown RBP27.06■■□□□ 1.92
SPN-205ENST00000563039 DISP3Q9P2K9 1392 aa27.06■■□□□ 1.92
SPN-205ENST00000563039 LRPPRCP42704 1394 aaKnown RBP27.05■■□□□ 1.92
SPN-205ENST00000563039 TBX22Q9Y458 520 aa27.05■■□□□ 1.92
SPN-205ENST00000563039 CENPJQ9HC77 1338 aaPredicted RBP27.04■■□□□ 1.92
SPN-205ENST00000563039 PTPRUQ92729 1446 aa27.04■■□□□ 1.92
SPN-205ENST00000563039 POLR1AO95602 1720 aaPredicted RBP27.03■■□□□ 1.92
SPN-205ENST00000563039 SAFB2Q14151 953 aaKnown RBP eCLIP27.03■■□□□ 1.92
SPN-205ENST00000563039 PRAM1Q96QH2 718 aa27.02■■□□□ 1.92
SPN-205ENST00000563039 POLR3GLQ9BT43 218 aa27.02■■□□□ 1.92
SPN-205ENST00000563039 ABCC11Q96J66 1382 aa27.01■■□□□ 1.91
SPN-205ENST00000563039 WAPLQ7Z5K2 1190 aa27.01■■□□□ 1.91
SPN-205ENST00000563039 QRICH2Q9H0J4 1663 aa27■■□□□ 1.91
SPN-205ENST00000563039 NPHP4O75161 1426 aaPredicted RBP27■■□□□ 1.91
SPN-205ENST00000563039 PLEKHH1Q9ULM0 1364 aa26.99■■□□□ 1.91
SPN-205ENST00000563039 TMF1P82094 1093 aa26.97■■□□□ 1.91
SPN-205ENST00000563039 DIP2AQ14689 1571 aa26.96■■□□□ 1.91
SPN-205ENST00000563039 AMOTL2Q9Y2J4 779 aa26.96■■□□□ 1.91
SPN-205ENST00000563039 DLC1Q96QB1 1528 aa26.95■■□□□ 1.91
SPN-205ENST00000563039 ROBO2Q9HCK4 1378 aa26.95■■□□□ 1.9
SPN-205ENST00000563039 TECPR2O15040 1411 aa26.95■■□□□ 1.9
SPN-205ENST00000563039 SBNO2Q9Y2G9 1366 aa26.94■■□□□ 1.9
SPN-205ENST00000563039 POGKQ9P215 609 aa26.94■■□□□ 1.9
SPN-205ENST00000563039 KNDC1Q76NI1 1749 aa26.93■■□□□ 1.9
SPN-205ENST00000563039 MINK1Q8N4C8 1332 aaPredicted RBP26.92■■□□□ 1.9
SPN-205ENST00000563039 CPS1P31327 1500 aa26.91■■□□□ 1.9
SPN-205ENST00000563039 STRCQ7RTU9 1775 aa26.9■■□□□ 1.9
SPN-205ENST00000563039 KCNA6P17658 529 aa26.89■■□□□ 1.89
SPN-205ENST00000563039 TULP4Q9NRJ4 1543 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms