RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 C3P01024 1663 aa19.79■□□□□ 0.76
SPG7-206ENST00000562775 NBPF1Q3BBV0 1214 aa19.78■□□□□ 0.76
SPG7-206ENST00000562775 ADGRF5Q8IZF2 1346 aa19.78■□□□□ 0.76
SPG7-206ENST00000562775 NEXMIFQ5QGS0 1516 aa19.78■□□□□ 0.76
SPG7-206ENST00000562775 KIAA1210Q9ULL0 1709 aa19.78■□□□□ 0.76
SPG7-206ENST00000562775 MYO5BQ9ULV0 1848 aa19.77■□□□□ 0.76
SPG7-206ENST00000562775 STAG3Q9UJ98 1225 aa19.77■□□□□ 0.76
SPG7-206ENST00000562775 VGFO15240 615 aaPredicted RBP19.76■□□□□ 0.75
SPG7-206ENST00000562775 CEBPAP49715 358 aaPredicted RBP19.75■□□□□ 0.75
SPG7-206ENST00000562775 ZFYVE9O95405 1425 aa19.75■□□□□ 0.75
SPG7-206ENST00000562775 ADAMTSL3P82987 1691 aa19.75■□□□□ 0.75
SPG7-206ENST00000562775 A2ML1A8K2U0 1454 aa19.75■□□□□ 0.75
SPG7-206ENST00000562775 PIK3C2GO75747 1445 aa19.73■□□□□ 0.75
SPG7-206ENST00000562775 NLRP1Q9C000 1473 aa19.72■□□□□ 0.75
SPG7-206ENST00000562775 KDM5AP29375 1690 aaKnown RBP19.72■□□□□ 0.75
SPG7-206ENST00000562775 RIMS1Q86UR5 1692 aaKnown RBP19.71■□□□□ 0.75
SPG7-206ENST00000562775 CFAP70Q5T0N1 1121 aa19.7■□□□□ 0.74
SPG7-206ENST00000562775 C14orf93Q9H972 538 aaKnown RBP19.69■□□□□ 0.74
SPG7-206ENST00000562775 ST20-MTHFSA0A0A6YYL1 179 aa19.67■□□□□ 0.74
SPG7-206ENST00000562775 NUTM2DQ5VT03 806 aaPredicted RBP19.67■□□□□ 0.74
SPG7-206ENST00000562775 SETBP1Q9Y6X0 1596 aa19.67■□□□□ 0.74
SPG7-206ENST00000562775 RIMS2Q9UQ26 1411 aa19.67■□□□□ 0.74
SPG7-206ENST00000562775 SCAF11Q99590 1463 aaKnown RBP19.66■□□□□ 0.74
SPG7-206ENST00000562775 IQGAP1P46940 1657 aa19.66■□□□□ 0.74
SPG7-206ENST00000562775 UBR1Q8IWV7 1749 aa19.66■□□□□ 0.74
SPG7-206ENST00000562775 WASHC2AQ641Q2 1341 aa19.65■□□□□ 0.74
SPG7-206ENST00000562775 PLPPR3Q6T4P5 718 aa19.65■□□□□ 0.74
SPG7-206ENST00000562775 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.65■□□□□ 0.74
SPG7-206ENST00000562775 POLR1AO95602 1720 aaPredicted RBP19.64■□□□□ 0.74
SPG7-206ENST00000562775 C11orf95C9JLR9 678 aaPredicted RBP19.64■□□□□ 0.73
SPG7-206ENST00000562775 HDGFP51858 240 aaKnown RBP19.64■□□□□ 0.73
SPG7-206ENST00000562775 DDX10Q13206 875 aaKnown RBP19.64■□□□□ 0.73
SPG7-206ENST00000562775 CCDC7Q96M83 1385 aa19.64■□□□□ 0.73
SPG7-206ENST00000562775 TMEM2Q9UHN6 1383 aa19.61■□□□□ 0.73
SPG7-206ENST00000562775 ADGRB1O14514 1584 aa19.61■□□□□ 0.73
SPG7-206ENST00000562775 MYO3AQ8NEV4 1616 aa19.61■□□□□ 0.73
SPG7-206ENST00000562775 EIF3AQ14152 1382 aaKnown RBP19.61■□□□□ 0.73
SPG7-206ENST00000562775 KIF7Q2M1P5 1343 aa19.6■□□□□ 0.73
SPG7-206ENST00000562775 TESK2Q96S53 571 aa19.57■□□□□ 0.72
SPG7-206ENST00000562775 TMEM132EQ6IEE7 984 aa19.57■□□□□ 0.72
SPG7-206ENST00000562775 THEMISQ8N1K5 641 aaPredicted RBP19.57■□□□□ 0.72
SPG7-206ENST00000562775 ALKQ9UM73 1620 aa19.56■□□□□ 0.72
SPG7-206ENST00000562775 SETD1BQ9UPS6 1966 aaKnown RBP19.56■□□□□ 0.72
SPG7-206ENST00000562775 PTPRMP28827 1452 aa19.56■□□□□ 0.72
SPG7-206ENST00000562775 SLIT1O75093 1534 aa19.55■□□□□ 0.72
SPG7-206ENST00000562775 ARHGAP23Q9P227 1491 aa19.55■□□□□ 0.72
SPG7-206ENST00000562775 CEP170BQ9Y4F5 1589 aaPredicted RBP19.55■□□□□ 0.72
SPG7-206ENST00000562775 ASXL1Q8IXJ9 1541 aa19.53■□□□□ 0.72
SPG7-206ENST00000562775 SLC24A1O60721 1099 aa19.53■□□□□ 0.72
SPG7-206ENST00000562775 TMF1P82094 1093 aa19.53■□□□□ 0.72
SPG7-206ENST00000562775 TRAK1Q9UPV9 953 aa19.52■□□□□ 0.71
SPG7-206ENST00000562775 EID1Q9Y6B2 187 aa19.52■□□□□ 0.71
SPG7-206ENST00000562775 ZNF142P52746 1687 aaPredicted RBP19.52■□□□□ 0.71
SPG7-206ENST00000562775 NRXN3Q9Y4C0 1643 aa19.51■□□□□ 0.71
SPG7-206ENST00000562775 TXNDC2Q86VQ3 553 aa19.51■□□□□ 0.71
SPG7-206ENST00000562775 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
SPG7-206ENST00000562775 LTKP29376 864 aa19.5■□□□□ 0.71
SPG7-206ENST00000562775 MIER1Q8N108 512 aa19.5■□□□□ 0.71
SPG7-206ENST00000562775 SETD1AO15047 1707 aaKnown RBP19.5■□□□□ 0.71
SPG7-206ENST00000562775 PLEKHG1Q9ULL1 1385 aa19.49■□□□□ 0.71
SPG7-206ENST00000562775 SBNO2Q9Y2G9 1366 aa19.49■□□□□ 0.71
SPG7-206ENST00000562775 CENPJQ9HC77 1338 aaPredicted RBP19.49■□□□□ 0.71
SPG7-206ENST00000562775 DISP3Q9P2K9 1392 aa19.49■□□□□ 0.71
SPG7-206ENST00000562775 POLR3GLQ9BT43 218 aa19.49■□□□□ 0.71
SPG7-206ENST00000562775 YTHDC2Q9H6S0 1430 aaKnown RBP19.48■□□□□ 0.71
SPG7-206ENST00000562775 ARHGEF28Q8N1W1 1705 aaKnown RBP19.47■□□□□ 0.71
SPG7-206ENST00000562775 CDCA8Q53HL2 280 aa19.46■□□□□ 0.71
SPG7-206ENST00000562775 BCANQ96GW7 911 aa19.45■□□□□ 0.7
SPG7-206ENST00000562775 ADAMTS13Q76LX8 1427 aa19.45■□□□□ 0.7
SPG7-206ENST00000562775 STK26Q9P289 416 aa19.44■□□□□ 0.7
SPG7-206ENST00000562775 LRPPRCP42704 1394 aaKnown RBP19.44■□□□□ 0.7
SPG7-206ENST00000562775 QRICH2Q9H0J4 1663 aa19.44■□□□□ 0.7
SPG7-206ENST00000562775 DLC1Q96QB1 1528 aa19.42■□□□□ 0.7
SPG7-206ENST00000562775 METP08581 1390 aa19.42■□□□□ 0.7
SPG7-206ENST00000562775 ABCC11Q96J66 1382 aa19.42■□□□□ 0.7
SPG7-206ENST00000562775 MED14O60244 1454 aa19.42■□□□□ 0.7
SPG7-206ENST00000562775 ANP32CO43423 234 aa19.4■□□□□ 0.7
SPG7-206ENST00000562775 ANKLE2Q86XL3 938 aa19.4■□□□□ 0.7
SPG7-206ENST00000562775 TBX22Q9Y458 520 aa19.39■□□□□ 0.69
SPG7-206ENST00000562775 KDM4FA0A1W2PPD8 638 aa19.38■□□□□ 0.69
SPG7-206ENST00000562775 DIP2AQ14689 1571 aa19.38■□□□□ 0.69
SPG7-206ENST00000562775 SIRT1Q96EB6 747 aa19.37■□□□□ 0.69
SPG7-206ENST00000562775 PRAM1Q96QH2 718 aa19.37■□□□□ 0.69
SPG7-206ENST00000562775 POGKQ9P215 609 aa19.37■□□□□ 0.69
SPG7-206ENST00000562775 KNDC1Q76NI1 1749 aa19.37■□□□□ 0.69
SPG7-206ENST00000562775 TECPR2O15040 1411 aa19.37■□□□□ 0.69
SPG7-206ENST00000562775 SLC26A8Q96RN1 970 aa19.36■□□□□ 0.69
SPG7-206ENST00000562775 PUS7Q96PZ0 661 aaKnown RBP19.35■□□□□ 0.69
SPG7-206ENST00000562775 EVC2Q86UK5 1308 aa19.34■□□□□ 0.69
SPG7-206ENST00000562775 FAM135BQ49AJ0 1406 aa19.34■□□□□ 0.69
SPG7-206ENST00000562775 SAFB2Q14151 953 aaKnown RBP eCLIP19.33■□□□□ 0.69
SPG7-206ENST00000562775 CPS1P31327 1500 aa19.33■□□□□ 0.68
SPG7-206ENST00000562775 TULP4Q9NRJ4 1543 aa19.32■□□□□ 0.68
SPG7-206ENST00000562775 PIK3R4Q99570 1358 aa19.31■□□□□ 0.68
SPG7-206ENST00000562775 MYOM1P52179 1685 aa19.3■□□□□ 0.68
SPG7-206ENST00000562775 PLEKHH1Q9ULM0 1364 aa19.3■□□□□ 0.68
SPG7-206ENST00000562775 WAPLQ7Z5K2 1190 aa19.3■□□□□ 0.68
SPG7-206ENST00000562775 PANK3Q9H999 370 aa19.3■□□□□ 0.68
SPG7-206ENST00000562775 PTPRUQ92729 1446 aa19.3■□□□□ 0.68
SPG7-206ENST00000562775 MINK1Q8N4C8 1332 aaPredicted RBP19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms