RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 EYA1Q99502 592 aa8.15□□□□□ -1.1
USP8-211ENST00000560527 BHMG1C9JSJ3 638 aaPredicted RBP8.14□□□□□ -1.11
USP8-211ENST00000560527 FAM161AQ3B820 660 aa8.14□□□□□ -1.11
USP8-211ENST00000560527 TATDN2Q93075 761 aa8.14□□□□□ -1.11
USP8-211ENST00000560527 MDM2Q00987 491 aaPredicted RBP8.13□□□□□ -1.11
USP8-211ENST00000560527 REPIN1Q9BWE0 567 aaKnown RBP8.13□□□□□ -1.11
USP8-211ENST00000560527 RABGEF1Q9UJ41 708 aa8.13□□□□□ -1.11
USP8-211ENST00000560527 PROX2Q3B8N5 592 aa8.12□□□□□ -1.11
USP8-211ENST00000560527 NUDT18Q6ZVK8 323 aa8.12□□□□□ -1.11
USP8-211ENST00000560527 FAM117AQ9C073 453 aa8.12□□□□□ -1.11
USP8-211ENST00000560527 PNMA3Q9UL41 463 aa8.12□□□□□ -1.11
USP8-211ENST00000560527 RCCD1A6NED2 376 aa8.11□□□□□ -1.11
USP8-211ENST00000560527 DNAJB2P25686 324 aa8.11□□□□□ -1.11
USP8-211ENST00000560527 Q6ZNB5 142 aa8.11□□□□□ -1.11
USP8-211ENST00000560527 IL27Q8NEV9 243 aa8.11□□□□□ -1.11
USP8-211ENST00000560527 MS4A1P11836 297 aa8.1□□□□□ -1.11
USP8-211ENST00000560527 SSTR3P32745 418 aaPredicted RBP8.1□□□□□ -1.11
USP8-211ENST00000560527 GOPCQ9HD26 462 aa8.1□□□□□ -1.11
USP8-211ENST00000560527 FAM217BQ9NTX9 383 aaPredicted RBP8.1□□□□□ -1.11
USP8-211ENST00000560527 KIAA1468Q9P260 1216 aa8.1□□□□□ -1.11
USP8-211ENST00000560527 PLEKHG3A1L390 1219 aa8.09□□□□□ -1.11
USP8-211ENST00000560527 C3orf80F5H4A9 247 aa8.09□□□□□ -1.11
USP8-211ENST00000560527 TMEM134Q9H6X4 195 aa8.09□□□□□ -1.11
USP8-211ENST00000560527 ANKK1Q8NFD2 765 aa8.08□□□□□ -1.12
USP8-211ENST00000560527 LAPTM4BQ86VI4 370 aa8.07□□□□□ -1.12
USP8-211ENST00000560527 SULF1Q8IWU6 871 aa8.07□□□□□ -1.12
USP8-211ENST00000560527 GTF3C3Q9Y5Q9 886 aa8.07□□□□□ -1.12
USP8-211ENST00000560527 NLRP7Q8WX94 980 aa8.06□□□□□ -1.12
USP8-211ENST00000560527 FAM98CQ17RN3 349 aaKnown RBP8.05□□□□□ -1.12
USP8-211ENST00000560527 NYAP1Q6ZVC0 841 aa8.05□□□□□ -1.12
USP8-211ENST00000560527 SMAPO00193 183 aa8.04□□□□□ -1.12
USP8-211ENST00000560527 ITGBL1O95965 494 aaPredicted RBP8.04□□□□□ -1.12
USP8-211ENST00000560527 LAPTM4AQ15012 233 aa8.04□□□□□ -1.12
USP8-211ENST00000560527 DIXDC1Q155Q3 683 aa8.04□□□□□ -1.12
USP8-211ENST00000560527 BEGAINQ9BUH8 593 aa8.04□□□□□ -1.12
USP8-211ENST00000560527 RSPH6AQ9H0K4 717 aa8.04□□□□□ -1.12
USP8-211ENST00000560527 CD46P15529 392 aa8.03□□□□□ -1.12
USP8-211ENST00000560527 ERICH6Q7L0X2 663 aa8.03□□□□□ -1.12
USP8-211ENST00000560527 HDGFP51858 240 aaKnown RBP8.02□□□□□ -1.13
USP8-211ENST00000560527 SH3D19Q5HYK7 790 aa8.02□□□□□ -1.13
USP8-211ENST00000560527 RSPH4AQ5TD94 716 aa8.02□□□□□ -1.13
USP8-211ENST00000560527 KCNC4Q03721 635 aa8.01□□□□□ -1.13
USP8-211ENST00000560527 SEPT9Q9UHD8 586 aaPredicted RBP8.01□□□□□ -1.13
USP8-211ENST00000560527 SLC4A3P48751 1232 aa8□□□□□ -1.13
USP8-211ENST00000560527 DDX11L8A8MPP1 907 aa7.99□□□□□ -1.13
USP8-211ENST00000560527 SKIV2LQ15477 1246 aaKnown RBP7.99□□□□□ -1.13
USP8-211ENST00000560527 SWT1Q5T5J6 900 aaKnown RBP7.99□□□□□ -1.13
USP8-211ENST00000560527 SOWAHBA6NEL2 793 aa7.98□□□□□ -1.13
USP8-211ENST00000560527 SLF2Q8IX21 1173 aa7.98□□□□□ -1.13
USP8-211ENST00000560527 ZFRQ96KR1 1074 aaKnown RBP7.98□□□□□ -1.13
USP8-211ENST00000560527 BCAMP50895 628 aa7.97□□□□□ -1.13
USP8-211ENST00000560527 NECTIN2Q92692 538 aa7.97□□□□□ -1.13
USP8-211ENST00000560527 PCMTD1Q96MG8 357 aaPredicted RBP7.97□□□□□ -1.13
USP8-211ENST00000560527 GJA5P36382 358 aa7.96□□□□□ -1.14
USP8-211ENST00000560527 USP46P62068 366 aa7.96□□□□□ -1.14
USP8-211ENST00000560527 MYSM1Q5VVJ2 828 aa7.96□□□□□ -1.14
USP8-211ENST00000560527 SAMD7Q7Z3H4 446 aa7.96□□□□□ -1.14
USP8-211ENST00000560527 SPIRE2Q8WWL2 714 aa7.96□□□□□ -1.14
USP8-211ENST00000560527 TBC1D2Q9BYX2 928 aa7.96□□□□□ -1.14
USP8-211ENST00000560527 SLC10A3P09131 477 aa7.95□□□□□ -1.14
USP8-211ENST00000560527 GCGRP47871 477 aa7.95□□□□□ -1.14
USP8-211ENST00000560527 TUSC1Q2TAM9 212 aa7.95□□□□□ -1.14
USP8-211ENST00000560527 NUTM1Q86Y26 1132 aa7.95□□□□□ -1.14
USP8-211ENST00000560527 RDH13Q8NBN7 331 aa7.95□□□□□ -1.14
USP8-211ENST00000560527 TRAF7Q6Q0C0 670 aa7.94□□□□□ -1.14
USP8-211ENST00000560527 GFRA3O60609 400 aa7.93□□□□□ -1.14
USP8-211ENST00000560527 KDM4AO75164 1064 aa7.93□□□□□ -1.14
USP8-211ENST00000560527 CLK2P49760 499 aaKnown RBP7.93□□□□□ -1.14
USP8-211ENST00000560527 LRCH3Q96II8 777 aa7.93□□□□□ -1.14
USP8-211ENST00000560527 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.93□□□□□ -1.14
USP8-211ENST00000560527 WBP1LQ9NX94 342 aa7.93□□□□□ -1.14
USP8-211ENST00000560527 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.92□□□□□ -1.14
USP8-211ENST00000560527 SPTLC1O15269 473 aa7.91□□□□□ -1.14
USP8-211ENST00000560527 RIC3Q7Z5B4 369 aa7.91□□□□□ -1.14
USP8-211ENST00000560527 RSBN1LQ6PCB5 846 aaPredicted RBP7.9□□□□□ -1.14
USP8-211ENST00000560527 PRR14Q9BWN1 585 aa7.9□□□□□ -1.14
USP8-211ENST00000560527 POLR3EQ9NVU0 708 aa7.9□□□□□ -1.14
USP8-211ENST00000560527 TSR3Q9UJK0 312 aaKnown RBP7.9□□□□□ -1.14
USP8-211ENST00000560527 HOXA2O43364 376 aa7.89□□□□□ -1.15
USP8-211ENST00000560527 KMT5BQ4FZB7 885 aa7.89□□□□□ -1.15
USP8-211ENST00000560527 GRIPAP1Q4V328 841 aa7.89□□□□□ -1.15
USP8-211ENST00000560527 MOXD2PA6NHM9 499 aa7.88□□□□□ -1.15
USP8-211ENST00000560527 CFHP08603 1231 aa7.88□□□□□ -1.15
USP8-211ENST00000560527 PPP2R2DQ66LE6 453 aa7.88□□□□□ -1.15
USP8-211ENST00000560527 PROCA1Q8NCQ7 364 aaPredicted RBP7.88□□□□□ -1.15
USP8-211ENST00000560527 LIMD1Q9UGP4 676 aa7.88□□□□□ -1.15
USP8-211ENST00000560527 PRPF38BQ5VTL8 546 aaKnown RBP7.87□□□□□ -1.15
USP8-211ENST00000560527 HPS5Q9UPZ3 1129 aa7.87□□□□□ -1.15
USP8-211ENST00000560527 RNF40O75150 1001 aa7.86□□□□□ -1.15
USP8-211ENST00000560527 ATP6V1AP38606 617 aa7.86□□□□□ -1.15
USP8-211ENST00000560527 FLIIQ13045 1269 aa7.86□□□□□ -1.15
USP8-211ENST00000560527 TIMELESSQ9UNS1 1208 aa7.86□□□□□ -1.15
USP8-211ENST00000560527 NRG2O14511 850 aaPredicted RBP7.85□□□□□ -1.15
USP8-211ENST00000560527 ACTN4O43707 911 aaKnown RBP7.85□□□□□ -1.15
USP8-211ENST00000560527 PPP4CP60510 307 aa7.85□□□□□ -1.15
USP8-211ENST00000560527 LILRB3O75022 631 aa7.84□□□□□ -1.15
USP8-211ENST00000560527 FDX1P10109 184 aa7.84□□□□□ -1.15
USP8-211ENST00000560527 NDUFV2P19404 249 aa7.84□□□□□ -1.15
USP8-211ENST00000560527 FUT2Q10981 343 aa7.84□□□□□ -1.15
USP8-211ENST00000560527 C14orf37Q86TY3 774 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms