RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 HAP1P54257 671 aaPredicted RBP12.29□□□□□ -0.44
CRNDE-208ENST00000560029 KCNV2Q8TDN2 545 aa12.29□□□□□ -0.44
CRNDE-208ENST00000560029 PTGDRQ13258 359 aa12.28□□□□□ -0.44
CRNDE-208ENST00000560029 ARHGEF1Q92888 912 aaKnown RBP12.28□□□□□ -0.44
CRNDE-208ENST00000560029 RNF223E7ERA6 249 aa12.27□□□□□ -0.45
CRNDE-208ENST00000560029 PPEF1O14829 653 aaPredicted RBP12.27□□□□□ -0.45
CRNDE-208ENST00000560029 EMID1Q96A84 441 aaPredicted RBP12.27□□□□□ -0.45
CRNDE-208ENST00000560029 TMUB1Q9BVT8 246 aa12.27□□□□□ -0.45
CRNDE-208ENST00000560029 NUTM2FA1L443 756 aa12.26□□□□□ -0.45
CRNDE-208ENST00000560029 DNAJB2P25686 324 aa12.26□□□□□ -0.45
CRNDE-208ENST00000560029 ZNF787Q6DD87 383 aa12.26□□□□□ -0.45
CRNDE-208ENST00000560029 ADGRG1Q9Y653 693 aa12.25□□□□□ -0.45
CRNDE-208ENST00000560029 SLC19A1P41440 591 aa12.24□□□□□ -0.45
CRNDE-208ENST00000560029 RBM46Q8TBY0 533 aaKnown RBP12.24□□□□□ -0.45
CRNDE-208ENST00000560029 PRR14Q9BWN1 585 aa12.24□□□□□ -0.45
CRNDE-208ENST00000560029 TMEM134Q9H6X4 195 aa12.24□□□□□ -0.45
CRNDE-208ENST00000560029 RCCD1A6NED2 376 aa12.23□□□□□ -0.45
CRNDE-208ENST00000560029 TRIM67Q6ZTA4 783 aa12.23□□□□□ -0.45
CRNDE-208ENST00000560029 S1PR4O95977 384 aa12.21□□□□□ -0.45
CRNDE-208ENST00000560029 CFHP08603 1231 aa12.2□□□□□ -0.46
CRNDE-208ENST00000560029 ACTN4O43707 911 aaKnown RBP12.18□□□□□ -0.46
CRNDE-208ENST00000560029 SLC10A3P09131 477 aa12.18□□□□□ -0.46
CRNDE-208ENST00000560029 KMT5BQ4FZB7 885 aa12.17□□□□□ -0.46
CRNDE-208ENST00000560029 SPRYD7Q5W111 196 aa12.17□□□□□ -0.46
CRNDE-208ENST00000560029 LIAT1Q6ZQX7 453 aa12.17□□□□□ -0.46
CRNDE-208ENST00000560029 SEMA3EO15041 775 aa12.14□□□□□ -0.47
CRNDE-208ENST00000560029 ANKLE1Q8NAG6 615 aa12.14□□□□□ -0.47
CRNDE-208ENST00000560029 PKDCCQ504Y2 493 aa12.13□□□□□ -0.47
CRNDE-208ENST00000560029 ZNF598Q86UK7 904 aaKnown RBP12.13□□□□□ -0.47
CRNDE-208ENST00000560029 ZNF775Q96BV0 537 aaPredicted RBP12.13□□□□□ -0.47
CRNDE-208ENST00000560029 TNFRSF10AO00220 468 aa12.12□□□□□ -0.47
CRNDE-208ENST00000560029 PUS10Q3MIT2 529 aaKnown RBP12.12□□□□□ -0.47
CRNDE-208ENST00000560029 FCHSD2O94868 740 aa12.11□□□□□ -0.47
CRNDE-208ENST00000560029 MYT1Q01538 1121 aa12.11□□□□□ -0.47
CRNDE-208ENST00000560029 ZNF697Q5TEC3 545 aa12.11□□□□□ -0.47
CRNDE-208ENST00000560029 POTECB2RU33 542 aa12.1□□□□□ -0.47
CRNDE-208ENST00000560029 PLA2G2CQ5R387 149 aa12.1□□□□□ -0.47
CRNDE-208ENST00000560029 ADH1BP00325 375 aa12.09□□□□□ -0.47
CRNDE-208ENST00000560029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.08□□□□□ -0.48
CRNDE-208ENST00000560029 NR1I2O75469 434 aa12.08□□□□□ -0.48
CRNDE-208ENST00000560029 SCUBE3Q8IX30 993 aa12.08□□□□□ -0.48
CRNDE-208ENST00000560029 PXYLP1Q8TE99 480 aa12.08□□□□□ -0.48
CRNDE-208ENST00000560029 SLC6A16Q9GZN6 736 aa12.08□□□□□ -0.48
CRNDE-208ENST00000560029 FAM187AA6NFU0 413 aa12.07□□□□□ -0.48
CRNDE-208ENST00000560029 GDF9O60383 454 aa12.05□□□□□ -0.48
CRNDE-208ENST00000560029 DGAT1O75907 488 aa12.05□□□□□ -0.48
CRNDE-208ENST00000560029 PRR20EP86478 221 aa12.05□□□□□ -0.48
CRNDE-208ENST00000560029 PRR20CP86479 221 aa12.05□□□□□ -0.48
CRNDE-208ENST00000560029 PRR20DP86480 221 aa12.05□□□□□ -0.48
CRNDE-208ENST00000560029 PRR20BP86481 221 aa12.05□□□□□ -0.48
CRNDE-208ENST00000560029 PRR20AP86496 221 aa12.05□□□□□ -0.48
CRNDE-208ENST00000560029 OATP04181 439 aa12.04□□□□□ -0.48
CRNDE-208ENST00000560029 FECHP22830 423 aa12.04□□□□□ -0.48
CRNDE-208ENST00000560029 RBM26Q5T8P6 1007 aaKnown RBP12.04□□□□□ -0.48
CRNDE-208ENST00000560029 VSIG10Q8N0Z9 540 aa12.04□□□□□ -0.48
CRNDE-208ENST00000560029 NLRP7Q8WX94 980 aa12.04□□□□□ -0.48
CRNDE-208ENST00000560029 FOXC1Q12948 553 aa12.02□□□□□ -0.49
CRNDE-208ENST00000560029 METTL3Q86U44 580 aaKnown RBP12.02□□□□□ -0.49
CRNDE-208ENST00000560029 SPSB2Q99619 263 aa12.02□□□□□ -0.49
CRNDE-208ENST00000560029 ST8SIA5O15466 376 aa12.01□□□□□ -0.49
CRNDE-208ENST00000560029 KDM2AQ9Y2K7 1162 aa12.01□□□□□ -0.49
CRNDE-208ENST00000560029 P3H3Q8IVL6 736 aa11.99□□□□□ -0.49
CRNDE-208ENST00000560029 RDH13Q8NBN7 331 aa11.99□□□□□ -0.49
CRNDE-208ENST00000560029 HIC1Q14526 733 aa11.98□□□□□ -0.49
CRNDE-208ENST00000560029 RSPH4AQ5TD94 716 aa11.97□□□□□ -0.49
CRNDE-208ENST00000560029 PKD2L1Q9P0L9 805 aa11.97□□□□□ -0.49
CRNDE-208ENST00000560029 DDX11L8A8MPP1 907 aa11.95□□□□□ -0.5
CRNDE-208ENST00000560029 FUT2Q10981 343 aa11.95□□□□□ -0.5
CRNDE-208ENST00000560029 AAASQ9NRG9 546 aa11.94□□□□□ -0.5
CRNDE-208ENST00000560029 MORN1Q5T089 497 aa11.93□□□□□ -0.5
CRNDE-208ENST00000560029 FCF1Q9Y324 198 aaKnown RBP11.93□□□□□ -0.5
CRNDE-208ENST00000560029 TESPA1A2RU30 521 aaPredicted RBP11.92□□□□□ -0.5
CRNDE-208ENST00000560029 GNPATO15228 680 aa11.92□□□□□ -0.5
CRNDE-208ENST00000560029 DAXXQ9UER7 740 aaPredicted RBP11.92□□□□□ -0.5
CRNDE-208ENST00000560029 FAM160A2Q8N612 972 aaPredicted RBP11.91□□□□□ -0.5
CRNDE-208ENST00000560029 PRDM9Q9NQV7 894 aa11.91□□□□□ -0.5
CRNDE-208ENST00000560029 DACH1Q9UI36 760 aa11.91□□□□□ -0.5
CRNDE-208ENST00000560029 SLC27A5Q9Y2P5 690 aa11.91□□□□□ -0.5
CRNDE-208ENST00000560029 THAP11Q96EK4 314 aa11.9□□□□□ -0.5
CRNDE-208ENST00000560029 PHOX2BQ99453 314 aa11.9□□□□□ -0.5
CRNDE-208ENST00000560029 GPR37O15354 613 aa11.89□□□□□ -0.51
CRNDE-208ENST00000560029 ATP6V1AP38606 617 aa11.88□□□□□ -0.51
CRNDE-208ENST00000560029 FMNL1O95466 1100 aaPredicted RBP11.86□□□□□ -0.51
CRNDE-208ENST00000560029 GCGRP47871 477 aa11.86□□□□□ -0.51
CRNDE-208ENST00000560029 RPIAP49247 311 aa11.86□□□□□ -0.51
CRNDE-208ENST00000560029 CD2BP2O95400 341 aaKnown RBP11.85□□□□□ -0.51
CRNDE-208ENST00000560029 SMYD5Q6GMV2 418 aa11.85□□□□□ -0.51
CRNDE-208ENST00000560029 CYP4X1Q8N118 509 aa11.84□□□□□ -0.51
CRNDE-208ENST00000560029 TOR4AQ9NXH8 423 aa11.84□□□□□ -0.51
CRNDE-208ENST00000560029 BRICD5Q6PL45 260 aa11.83□□□□□ -0.52
CRNDE-208ENST00000560029 RNF19BQ6ZMZ0 732 aa11.83□□□□□ -0.52
CRNDE-208ENST00000560029 LMOD2Q6P5Q4 547 aa11.81□□□□□ -0.52
CRNDE-208ENST00000560029 TREML4Q6UXN2 200 aa11.8□□□□□ -0.52
CRNDE-208ENST00000560029 GMPR2Q9P2T1 348 aaKnown RBP11.8□□□□□ -0.52
CRNDE-208ENST00000560029 SULF1Q8IWU6 871 aa11.79□□□□□ -0.52
CRNDE-208ENST00000560029 AXIN1O15169 862 aa11.78□□□□□ -0.52
CRNDE-208ENST00000560029 TTC24A2A3L6 582 aaPredicted RBP11.77□□□□□ -0.53
CRNDE-208ENST00000560029 ZBTB24O43167 697 aaPredicted RBP11.77□□□□□ -0.53
CRNDE-208ENST00000560029 AVPP01185 164 aa11.76□□□□□ -0.53
CRNDE-208ENST00000560029 LCE2AQ5TA79 106 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms