RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 CEBPAP49715 358 aaPredicted RBP20.28■□□□□ 0.84
RABGGTA-209ENST00000559551 KIAA1210Q9ULL0 1709 aa20.27■□□□□ 0.84
RABGGTA-209ENST00000559551 LAMC1P11047 1609 aa20.27■□□□□ 0.84
RABGGTA-209ENST00000559551 GPRASP1Q5JY77 1395 aa20.27■□□□□ 0.83
RABGGTA-209ENST00000559551 EIF4G2P78344 907 aaKnown RBP eCLIP20.25■□□□□ 0.83
RABGGTA-209ENST00000559551 A2ML1A8K2U0 1454 aa20.24■□□□□ 0.83
RABGGTA-209ENST00000559551 ROCK2O75116 1388 aaKnown RBP20.24■□□□□ 0.83
RABGGTA-209ENST00000559551 TNRQ92752 1358 aa20.24■□□□□ 0.83
RABGGTA-209ENST00000559551 STAC3Q96MF2 364 aa20.23■□□□□ 0.83
RABGGTA-209ENST00000559551 USP47Q96K76 1375 aa20.23■□□□□ 0.83
RABGGTA-209ENST00000559551 UBR1Q8IWV7 1749 aa20.23■□□□□ 0.83
RABGGTA-209ENST00000559551 CARD11Q9BXL7 1154 aa20.22■□□□□ 0.83
RABGGTA-209ENST00000559551 RPGRIP1LQ68CZ1 1315 aa20.22■□□□□ 0.83
RABGGTA-209ENST00000559551 IQGAP1P46940 1657 aa20.21■□□□□ 0.83
RABGGTA-209ENST00000559551 PIK3C2GO75747 1445 aa20.21■□□□□ 0.83
RABGGTA-209ENST00000559551 POLR1AO95602 1720 aaPredicted RBP20.21■□□□□ 0.83
RABGGTA-209ENST00000559551 NUTM2DQ5VT03 806 aaPredicted RBP20.2■□□□□ 0.82
RABGGTA-209ENST00000559551 KDM5AP29375 1690 aaKnown RBP20.2■□□□□ 0.82
RABGGTA-209ENST00000559551 DIEXFQ68CQ4 756 aaKnown RBP20.19■□□□□ 0.82
RABGGTA-209ENST00000559551 C11orf95C9JLR9 678 aaPredicted RBP20.18■□□□□ 0.82
RABGGTA-209ENST00000559551 CFAP70Q5T0N1 1121 aa20.17■□□□□ 0.82
RABGGTA-209ENST00000559551 ZFYVE9O95405 1425 aa20.17■□□□□ 0.82
RABGGTA-209ENST00000559551 MYO3AQ8NEV4 1616 aa20.16■□□□□ 0.82
RABGGTA-209ENST00000559551 PLPPR3Q6T4P5 718 aa20.15■□□□□ 0.82
RABGGTA-209ENST00000559551 ADGRB1O14514 1584 aa20.15■□□□□ 0.82
RABGGTA-209ENST00000559551 NLRP1Q9C000 1473 aa20.14■□□□□ 0.81
RABGGTA-209ENST00000559551 WASHC2AQ641Q2 1341 aa20.13■□□□□ 0.81
RABGGTA-209ENST00000559551 SETBP1Q9Y6X0 1596 aa20.13■□□□□ 0.81
RABGGTA-209ENST00000559551 ST20-MTHFSA0A0A6YYL1 179 aa20.12■□□□□ 0.81
RABGGTA-209ENST00000559551 RIMS2Q9UQ26 1411 aa20.12■□□□□ 0.81
RABGGTA-209ENST00000559551 C14orf93Q9H972 538 aaKnown RBP20.12■□□□□ 0.81
RABGGTA-209ENST00000559551 STAG3Q9UJ98 1225 aa20.12■□□□□ 0.81
RABGGTA-209ENST00000559551 ASXL1Q8IXJ9 1541 aa20.11■□□□□ 0.81
RABGGTA-209ENST00000559551 VGFO15240 615 aaPredicted RBP20.11■□□□□ 0.81
RABGGTA-209ENST00000559551 SETD1AO15047 1707 aaKnown RBP20.11■□□□□ 0.81
RABGGTA-209ENST00000559551 NRXN3Q9Y4C0 1643 aa20.1■□□□□ 0.81
RABGGTA-209ENST00000559551 SCAF11Q99590 1463 aaKnown RBP20.09■□□□□ 0.81
RABGGTA-209ENST00000559551 SETD1BQ9UPS6 1966 aaKnown RBP20.08■□□□□ 0.81
RABGGTA-209ENST00000559551 SENP3Q9H4L4 574 aaPredicted RBP20.08■□□□□ 0.81
RABGGTA-209ENST00000559551 CCDC7Q96M83 1385 aa20.08■□□□□ 0.8
RABGGTA-209ENST00000559551 DDX10Q13206 875 aaKnown RBP20.07■□□□□ 0.8
RABGGTA-209ENST00000559551 ALKQ9UM73 1620 aa20.07■□□□□ 0.8
RABGGTA-209ENST00000559551 TESK2Q96S53 571 aa20.06■□□□□ 0.8
RABGGTA-209ENST00000559551 KIF7Q2M1P5 1343 aa20.06■□□□□ 0.8
RABGGTA-209ENST00000559551 TMEM2Q9UHN6 1383 aa20.06■□□□□ 0.8
RABGGTA-209ENST00000559551 PTPRMP28827 1452 aa20.06■□□□□ 0.8
RABGGTA-209ENST00000559551 CEP170BQ9Y4F5 1589 aaPredicted RBP20.06■□□□□ 0.8
RABGGTA-209ENST00000559551 ZNF142P52746 1687 aaPredicted RBP20.05■□□□□ 0.8
RABGGTA-209ENST00000559551 TMEM132EQ6IEE7 984 aa20.05■□□□□ 0.8
RABGGTA-209ENST00000559551 ARHGAP23Q9P227 1491 aa20.03■□□□□ 0.8
RABGGTA-209ENST00000559551 ARHGEF28Q8N1W1 1705 aaKnown RBP20.03■□□□□ 0.8
RABGGTA-209ENST00000559551 SLIT1O75093 1534 aa20.03■□□□□ 0.8
RABGGTA-209ENST00000559551 LTKP29376 864 aa20■□□□□ 0.79
RABGGTA-209ENST00000559551 DISP3Q9P2K9 1392 aa19.99■□□□□ 0.79
RABGGTA-209ENST00000559551 QRICH2Q9H0J4 1663 aa19.98■□□□□ 0.79
RABGGTA-209ENST00000559551 MIER1Q8N108 512 aa19.98■□□□□ 0.79
RABGGTA-209ENST00000559551 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.97■□□□□ 0.79
RABGGTA-209ENST00000559551 TRAK1Q9UPV9 953 aa19.96■□□□□ 0.79
RABGGTA-209ENST00000559551 ADAMTS13Q76LX8 1427 aa19.95■□□□□ 0.78
RABGGTA-209ENST00000559551 EIF3AQ14152 1382 aaKnown RBP19.94■□□□□ 0.78
RABGGTA-209ENST00000559551 YTHDC2Q9H6S0 1430 aaKnown RBP19.94■□□□□ 0.78
RABGGTA-209ENST00000559551 METP08581 1390 aa19.92■□□□□ 0.78
RABGGTA-209ENST00000559551 PLEKHG1Q9ULL1 1385 aa19.92■□□□□ 0.78
RABGGTA-209ENST00000559551 TXNDC2Q86VQ3 553 aa19.92■□□□□ 0.78
RABGGTA-209ENST00000559551 THEMISQ8N1K5 641 aaPredicted RBP19.92■□□□□ 0.78
RABGGTA-209ENST00000559551 MED14O60244 1454 aa19.92■□□□□ 0.78
RABGGTA-209ENST00000559551 SCAF1Q9H7N4 1312 aaKnown RBP19.91■□□□□ 0.78
RABGGTA-209ENST00000559551 MYOM1P52179 1685 aa19.9■□□□□ 0.78
RABGGTA-209ENST00000559551 SBNO2Q9Y2G9 1366 aa19.9■□□□□ 0.78
RABGGTA-209ENST00000559551 HDGFP51858 240 aaKnown RBP19.9■□□□□ 0.78
RABGGTA-209ENST00000559551 CENPJQ9HC77 1338 aaPredicted RBP19.89■□□□□ 0.77
RABGGTA-209ENST00000559551 POLR3GLQ9BT43 218 aa19.89■□□□□ 0.77
RABGGTA-209ENST00000559551 STK26Q9P289 416 aa19.89■□□□□ 0.77
RABGGTA-209ENST00000559551 KNDC1Q76NI1 1749 aa19.89■□□□□ 0.77
RABGGTA-209ENST00000559551 TMF1P82094 1093 aa19.87■□□□□ 0.77
RABGGTA-209ENST00000559551 LRPPRCP42704 1394 aaKnown RBP19.87■□□□□ 0.77
RABGGTA-209ENST00000559551 DLC1Q96QB1 1528 aa19.86■□□□□ 0.77
RABGGTA-209ENST00000559551 EID1Q9Y6B2 187 aa19.85■□□□□ 0.77
RABGGTA-209ENST00000559551 TULP4Q9NRJ4 1543 aa19.85■□□□□ 0.77
RABGGTA-209ENST00000559551 ABCC11Q96J66 1382 aa19.83■□□□□ 0.77
RABGGTA-209ENST00000559551 PTPRUQ92729 1446 aa19.83■□□□□ 0.77
RABGGTA-209ENST00000559551 SLC26A8Q96RN1 970 aa19.83■□□□□ 0.76
RABGGTA-209ENST00000559551 PLEKHH1Q9ULM0 1364 aa19.82■□□□□ 0.76
RABGGTA-209ENST00000559551 CPS1P31327 1500 aa19.82■□□□□ 0.76
RABGGTA-209ENST00000559551 TECPR2O15040 1411 aa19.82■□□□□ 0.76
RABGGTA-209ENST00000559551 DIP2AQ14689 1571 aa19.81■□□□□ 0.76
RABGGTA-209ENST00000559551 BCANQ96GW7 911 aa19.81■□□□□ 0.76
RABGGTA-209ENST00000559551 PRAM1Q96QH2 718 aa19.81■□□□□ 0.76
RABGGTA-209ENST00000559551 SAFB2Q14151 953 aaKnown RBP eCLIP19.8■□□□□ 0.76
RABGGTA-209ENST00000559551 WAPLQ7Z5K2 1190 aa19.79■□□□□ 0.76
RABGGTA-209ENST00000559551 TBX22Q9Y458 520 aa19.78■□□□□ 0.76
RABGGTA-209ENST00000559551 XRN1Q8IZH2 1706 aaKnown RBP19.78■□□□□ 0.76
RABGGTA-209ENST00000559551 ANKLE2Q86XL3 938 aa19.77■□□□□ 0.75
RABGGTA-209ENST00000559551 CHD2O14647 1828 aaKnown RBP19.76■□□□□ 0.75
RABGGTA-209ENST00000559551 ROBO2Q9HCK4 1378 aa19.76■□□□□ 0.75
RABGGTA-209ENST00000559551 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.76■□□□□ 0.75
RABGGTA-209ENST00000559551 MINK1Q8N4C8 1332 aaPredicted RBP19.75■□□□□ 0.75
RABGGTA-209ENST00000559551 PER1O15534 1290 aaPredicted RBP19.74■□□□□ 0.75
RABGGTA-209ENST00000559551 FAM135BQ49AJ0 1406 aa19.74■□□□□ 0.75
RABGGTA-209ENST00000559551 POGKQ9P215 609 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms