RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 SPTLC1O15269 473 aa11.43□□□□□ -0.58
ZEB1-210ENST00000557827 KCNA1Q09470 495 aa11.43□□□□□ -0.58
ZEB1-210ENST00000557827 PBXIP1Q96AQ6 731 aa11.43□□□□□ -0.58
ZEB1-210ENST00000557827 BRD1O95696 1058 aa11.42□□□□□ -0.58
ZEB1-210ENST00000557827 TTC13Q8NBP0 860 aa11.42□□□□□ -0.58
ZEB1-210ENST00000557827 HDGFL1Q5TGJ6 251 aa11.4□□□□□ -0.58
ZEB1-210ENST00000557827 AP1G2O75843 785 aa11.39□□□□□ -0.59
ZEB1-210ENST00000557827 CSPP1Q1MSJ5 1256 aa11.39□□□□□ -0.59
ZEB1-210ENST00000557827 C6orf132Q5T0Z8 1188 aa11.39□□□□□ -0.59
ZEB1-210ENST00000557827 RSBN1LQ6PCB5 846 aaPredicted RBP11.39□□□□□ -0.59
ZEB1-210ENST00000557827 PELP1Q8IZL8 1130 aaKnown RBP11.39□□□□□ -0.59
ZEB1-210ENST00000557827 ZNF710Q8N1W2 664 aa11.39□□□□□ -0.59
ZEB1-210ENST00000557827 METRNQ9UJH8 293 aa11.39□□□□□ -0.59
ZEB1-210ENST00000557827 USTQ9Y2C2 406 aa11.39□□□□□ -0.59
ZEB1-210ENST00000557827 RFX1P22670 979 aa11.38□□□□□ -0.59
ZEB1-210ENST00000557827 RBM46Q8TBY0 533 aaKnown RBP11.38□□□□□ -0.59
ZEB1-210ENST00000557827 RBM27Q9P2N5 1060 aaKnown RBP11.38□□□□□ -0.59
ZEB1-210ENST00000557827 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.37□□□□□ -0.59
ZEB1-210ENST00000557827 E9PSI1 815 aa11.37□□□□□ -0.59
ZEB1-210ENST00000557827 LILRB3O75022 631 aa11.37□□□□□ -0.59
ZEB1-210ENST00000557827 CSB-PGBD3P0DP91 1061 aa11.37□□□□□ -0.59
ZEB1-210ENST00000557827 SRPK2P78362 688 aaKnown RBP11.37□□□□□ -0.59
ZEB1-210ENST00000557827 QPCTQ16769 361 aa11.37□□□□□ -0.59
ZEB1-210ENST00000557827 IGSF3O75054 1194 aa11.36□□□□□ -0.59
ZEB1-210ENST00000557827 SEC24BO95487 1268 aa11.36□□□□□ -0.59
ZEB1-210ENST00000557827 CD46P15529 392 aa11.36□□□□□ -0.59
ZEB1-210ENST00000557827 JPH4Q96JJ6 628 aa11.36□□□□□ -0.59
ZEB1-210ENST00000557827 MOXD2PA6NHM9 499 aa11.35□□□□□ -0.59
ZEB1-210ENST00000557827 RTL5Q5HYW3 569 aaPredicted RBP11.35□□□□□ -0.59
ZEB1-210ENST00000557827 CFAP70Q5T0N1 1121 aa11.35□□□□□ -0.59
ZEB1-210ENST00000557827 NUTM1Q86Y26 1132 aa11.35□□□□□ -0.59
ZEB1-210ENST00000557827 ADAMTS19Q8TE59 1207 aa11.35□□□□□ -0.59
ZEB1-210ENST00000557827 PCDHB15Q9Y5E8 787 aa11.34□□□□□ -0.59
ZEB1-210ENST00000557827 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.33□□□□□ -0.6
ZEB1-210ENST00000557827 USP17L8P0C7I0 530 aa11.33□□□□□ -0.6
ZEB1-210ENST00000557827 GJA5P36382 358 aa11.33□□□□□ -0.6
ZEB1-210ENST00000557827 SHROOM4Q9ULL8 1493 aa11.32□□□□□ -0.6
ZEB1-210ENST00000557827 NDUFV2P19404 249 aa11.32□□□□□ -0.6
ZEB1-210ENST00000557827 PRSS12P56730 875 aa11.32□□□□□ -0.6
ZEB1-210ENST00000557827 PCDHGA4Q9Y5G9 962 aa11.32□□□□□ -0.6
ZEB1-210ENST00000557827 CARNS1A5YM72 827 aa11.31□□□□□ -0.6
ZEB1-210ENST00000557827 RCCD1A6NED2 376 aa11.31□□□□□ -0.6
ZEB1-210ENST00000557827 FOSBP53539 338 aa11.31□□□□□ -0.6
ZEB1-210ENST00000557827 GJD4Q96KN9 370 aaPredicted RBP11.31□□□□□ -0.6
ZEB1-210ENST00000557827 NDUFB9Q9Y6M9 179 aa11.31□□□□□ -0.6
ZEB1-210ENST00000557827 KDM4FA0A1W2PPD8 638 aa11.3□□□□□ -0.6
ZEB1-210ENST00000557827 NUTM2BA6NNL0 878 aaPredicted RBP11.3□□□□□ -0.6
ZEB1-210ENST00000557827 NUTM2EB1AL46 878 aaPredicted RBP11.3□□□□□ -0.6
ZEB1-210ENST00000557827 WASHC4Q2M389 1173 aa11.3□□□□□ -0.6
ZEB1-210ENST00000557827 NUTM2DQ5VT03 806 aaPredicted RBP11.3□□□□□ -0.6
ZEB1-210ENST00000557827 NUTM2AQ8IVF1 878 aaPredicted RBP11.3□□□□□ -0.6
ZEB1-210ENST00000557827 PPP1R12CQ9BZL4 782 aa11.3□□□□□ -0.6
ZEB1-210ENST00000557827 C3orf67Q6ZVT6 689 aa11.29□□□□□ -0.6
ZEB1-210ENST00000557827 SULF1Q8IWU6 871 aa11.29□□□□□ -0.6
ZEB1-210ENST00000557827 CDCA7LQ96GN5 454 aa11.29□□□□□ -0.6
ZEB1-210ENST00000557827 COLQQ9Y215 455 aaPredicted RBP11.29□□□□□ -0.6
ZEB1-210ENST00000557827 CCDC27Q2M243 656 aa11.28□□□□□ -0.6
ZEB1-210ENST00000557827 CABLES1Q8TDN4 633 aa11.28□□□□□ -0.6
ZEB1-210ENST00000557827 ZDHHC16Q969W1 377 aa11.28□□□□□ -0.6
ZEB1-210ENST00000557827 AMOTL2Q9Y2J4 779 aa11.28□□□□□ -0.6
ZEB1-210ENST00000557827 IVNS1ABPQ9Y6Y0 642 aa11.28□□□□□ -0.6
ZEB1-210ENST00000557827 DDX11L8A8MPP1 907 aa11.27□□□□□ -0.61
ZEB1-210ENST00000557827 MAMSTRQ6ZN01 415 aa11.27□□□□□ -0.61
ZEB1-210ENST00000557827 PRPF38BQ5VTL8 546 aaKnown RBP11.26□□□□□ -0.61
ZEB1-210ENST00000557827 EYA1Q99502 592 aa11.26□□□□□ -0.61
ZEB1-210ENST00000557827 PALM3A6NDB9 673 aaPredicted RBP11.25□□□□□ -0.61
ZEB1-210ENST00000557827 VRTNQ9H8Y1 702 aa11.25□□□□□ -0.61
ZEB1-210ENST00000557827 LMOD1P29536 600 aaPredicted RBP11.24□□□□□ -0.61
ZEB1-210ENST00000557827 ZNF454Q8N9F8 522 aa11.24□□□□□ -0.61
ZEB1-210ENST00000557827 ALG2Q9H553 416 aa11.24□□□□□ -0.61
ZEB1-210ENST00000557827 FAM198AQ9UFP1 575 aa11.24□□□□□ -0.61
ZEB1-210ENST00000557827 VAC14Q08AM6 782 aa11.23□□□□□ -0.61
ZEB1-210ENST00000557827 SND1Q7KZF4 910 aaKnown RBP eCLIP11.23□□□□□ -0.61
ZEB1-210ENST00000557827 ADAM33Q9BZ11 813 aa11.23□□□□□ -0.61
ZEB1-210ENST00000557827 GPR37L1O60883 481 aa11.22□□□□□ -0.61
ZEB1-210ENST00000557827 TRIM34Q9BYJ4 488 aa11.21□□□□□ -0.61
ZEB1-210ENST00000557827 ZBTB3Q9H5J0 574 aa11.21□□□□□ -0.61
ZEB1-210ENST00000557827 HMX1Q9NP08 348 aaPredicted RBP11.21□□□□□ -0.61
ZEB1-210ENST00000557827 TFIP11Q9UBB9 837 aaKnown RBP11.21□□□□□ -0.61
ZEB1-210ENST00000557827 TMEM88BA6NKF7 163 aa11.2□□□□□ -0.62
ZEB1-210ENST00000557827 CTDSPL2Q05D32 466 aa11.2□□□□□ -0.62
ZEB1-210ENST00000557827 POTEB2H3BUK9 544 aa11.19□□□□□ -0.62
ZEB1-210ENST00000557827 ATG7O95352 703 aa11.19□□□□□ -0.62
ZEB1-210ENST00000557827 CDCA8Q53HL2 280 aa11.19□□□□□ -0.62
ZEB1-210ENST00000557827 SCUBE2Q9NQ36 999 aa11.19□□□□□ -0.62
ZEB1-210ENST00000557827 KDM4AO75164 1064 aa11.18□□□□□ -0.62
ZEB1-210ENST00000557827 DNAJB2P25686 324 aa11.18□□□□□ -0.62
ZEB1-210ENST00000557827 UCN2Q96RP3 112 aa11.17□□□□□ -0.62
ZEB1-210ENST00000557827 POTEFA5A3E0 1075 aa11.16□□□□□ -0.62
ZEB1-210ENST00000557827 NUDT18Q6ZVK8 323 aa11.16□□□□□ -0.62
ZEB1-210ENST00000557827 TMEM134Q9H6X4 195 aa11.16□□□□□ -0.62
ZEB1-210ENST00000557827 FDX1P10109 184 aa11.15□□□□□ -0.62
ZEB1-210ENST00000557827 PRR7Q8TB68 274 aa11.15□□□□□ -0.62
ZEB1-210ENST00000557827 OTUD5Q96G74 571 aa11.15□□□□□ -0.62
ZEB1-210ENST00000557827 C3orf80F5H4A9 247 aa11.14□□□□□ -0.63
ZEB1-210ENST00000557827 RDH13Q8NBN7 331 aa11.14□□□□□ -0.63
ZEB1-210ENST00000557827 TSKSQ9UJT2 592 aa11.14□□□□□ -0.63
ZEB1-210ENST00000557827 HOXA2O43364 376 aa11.13□□□□□ -0.63
ZEB1-210ENST00000557827 COL9A1P20849 921 aa11.13□□□□□ -0.63
ZEB1-210ENST00000557827 USP46P62068 366 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms