RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 HPS5Q9UPZ3 1129 aa12.07□□□□□ -0.48
GPHN-215ENST00000557654 WBP1LQ9NX94 342 aa12.05□□□□□ -0.48
GPHN-215ENST00000557654 HCSTQ9UBK5 93 aa12.05□□□□□ -0.48
GPHN-215ENST00000557654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.04□□□□□ -0.48
GPHN-215ENST00000557654 HDGFP51858 240 aaKnown RBP12.03□□□□□ -0.48
GPHN-215ENST00000557654 TSR3Q9UJK0 312 aaKnown RBP12.02□□□□□ -0.49
GPHN-215ENST00000557654 SLC24A3Q9HC58 644 aa12.01□□□□□ -0.49
GPHN-215ENST00000557654 PPP4CP60510 307 aa12□□□□□ -0.49
GPHN-215ENST00000557654 MDM2Q00987 491 aaPredicted RBP11.98□□□□□ -0.49
GPHN-215ENST00000557654 SLF2Q8IX21 1173 aa11.98□□□□□ -0.49
GPHN-215ENST00000557654 SLC10A3P09131 477 aa11.96□□□□□ -0.49
GPHN-215ENST00000557654 DAXXQ9UER7 740 aaPredicted RBP11.96□□□□□ -0.49
GPHN-215ENST00000557654 REPIN1Q9BWE0 567 aaKnown RBP11.94□□□□□ -0.5
GPHN-215ENST00000557654 DDX11L8A8MPP1 907 aa11.93□□□□□ -0.5
GPHN-215ENST00000557654 TRIM66O15016 1216 aa11.93□□□□□ -0.5
GPHN-215ENST00000557654 APLP1P51693 650 aa11.93□□□□□ -0.5
GPHN-215ENST00000557654 AK7Q96M32 723 aa11.93□□□□□ -0.5
GPHN-215ENST00000557654 SLC4A3P48751 1232 aa11.92□□□□□ -0.5
GPHN-215ENST00000557654 TPRNQ4KMQ1 711 aa11.92□□□□□ -0.5
GPHN-215ENST00000557654 CFHP08603 1231 aa11.9□□□□□ -0.5
GPHN-215ENST00000557654 RDH13Q8NBN7 331 aa11.9□□□□□ -0.5
GPHN-215ENST00000557654 TTLL12Q14166 644 aaPredicted RBP11.88□□□□□ -0.51
GPHN-215ENST00000557654 AMHR2Q16671 573 aa11.88□□□□□ -0.51
GPHN-215ENST00000557654 TMUB1Q9BVT8 246 aa11.88□□□□□ -0.51
GPHN-215ENST00000557654 GPCPD1Q9NPB8 672 aa11.88□□□□□ -0.51
GPHN-215ENST00000557654 CLCN1P35523 988 aa11.87□□□□□ -0.51
GPHN-215ENST00000557654 NYAP1Q6ZVC0 841 aa11.87□□□□□ -0.51
GPHN-215ENST00000557654 PARP9Q8IXQ6 854 aa11.85□□□□□ -0.51
GPHN-215ENST00000557654 PDE4DQ08499 809 aa11.84□□□□□ -0.51
GPHN-215ENST00000557654 SULF1Q8IWU6 871 aa11.84□□□□□ -0.51
GPHN-215ENST00000557654 NECTIN2Q92692 538 aa11.84□□□□□ -0.51
GPHN-215ENST00000557654 FAM217BQ9NTX9 383 aaPredicted RBP11.84□□□□□ -0.51
GPHN-215ENST00000557654 PLA2G2EQ9NZK7 142 aa11.84□□□□□ -0.51
GPHN-215ENST00000557654 PRKCSHP14314 528 aaPredicted RBP11.83□□□□□ -0.52
GPHN-215ENST00000557654 CD46P15529 392 aa11.83□□□□□ -0.52
GPHN-215ENST00000557654 GIGYF2Q6Y7W6 1299 aaKnown RBP11.83□□□□□ -0.52
GPHN-215ENST00000557654 COPS2P61201 443 aa11.82□□□□□ -0.52
GPHN-215ENST00000557654 KMT5BQ4FZB7 885 aa11.82□□□□□ -0.52
GPHN-215ENST00000557654 MTRQ99707 1265 aa11.82□□□□□ -0.52
GPHN-215ENST00000557654 ACTN4O43707 911 aaKnown RBP11.81□□□□□ -0.52
GPHN-215ENST00000557654 RSPH4AQ5TD94 716 aa11.81□□□□□ -0.52
GPHN-215ENST00000557654 SSTR3P32745 418 aaPredicted RBP11.8□□□□□ -0.52
GPHN-215ENST00000557654 GCGRP47871 477 aa11.8□□□□□ -0.52
GPHN-215ENST00000557654 PUS10Q3MIT2 529 aaKnown RBP11.8□□□□□ -0.52
GPHN-215ENST00000557654 TJAP1Q5JTD0 557 aa11.8□□□□□ -0.52
GPHN-215ENST00000557654 PCDHB3Q9Y5E6 796 aa11.8□□□□□ -0.52
GPHN-215ENST00000557654 BLOC1S3Q6QNY0 202 aa11.79□□□□□ -0.52
GPHN-215ENST00000557654 ZNF516Q92618 1163 aa11.79□□□□□ -0.52
GPHN-215ENST00000557654 ITGBL1O95965 494 aaPredicted RBP11.78□□□□□ -0.52
GPHN-215ENST00000557654 MS4A1P11836 297 aa11.78□□□□□ -0.52
GPHN-215ENST00000557654 FUT2Q10981 343 aa11.78□□□□□ -0.52
GPHN-215ENST00000557654 PRR14Q9BWN1 585 aa11.78□□□□□ -0.52
GPHN-215ENST00000557654 GPBP1L1Q9HC44 474 aaPredicted RBP11.76□□□□□ -0.53
GPHN-215ENST00000557654 KCNC4Q03721 635 aa11.75□□□□□ -0.53
GPHN-215ENST00000557654 IL21Q9HBE4 155 aa11.74□□□□□ -0.53
GPHN-215ENST00000557654 TLL1O43897 1013 aa11.72□□□□□ -0.53
GPHN-215ENST00000557654 NKX2-3Q8TAU0 364 aa11.72□□□□□ -0.53
GPHN-215ENST00000557654 HLA-CQ95604 372 aa11.72□□□□□ -0.53
GPHN-215ENST00000557654 BEGAINQ9BUH8 593 aa11.72□□□□□ -0.53
GPHN-215ENST00000557654 KDM4AO75164 1064 aa11.71□□□□□ -0.53
GPHN-215ENST00000557654 ZPR1O75312 459 aa11.7□□□□□ -0.54
GPHN-215ENST00000557654 ATP6V1AP38606 617 aa11.7□□□□□ -0.54
GPHN-215ENST00000557654 MORN1Q5T089 497 aa11.7□□□□□ -0.54
GPHN-215ENST00000557654 GUCA2AQ02747 115 aa11.69□□□□□ -0.54
GPHN-215ENST00000557654 SCUBE3Q8IX30 993 aa11.68□□□□□ -0.54
GPHN-215ENST00000557654 SLC27A5Q9Y2P5 690 aa11.68□□□□□ -0.54
GPHN-215ENST00000557654 NUTM1Q86Y26 1132 aa11.67□□□□□ -0.54
GPHN-215ENST00000557654 SPIRE2Q8WWL2 714 aa11.67□□□□□ -0.54
GPHN-215ENST00000557654 KDM4CQ9H3R0 1056 aa11.67□□□□□ -0.54
GPHN-215ENST00000557654 HOXA2O43364 376 aa11.66□□□□□ -0.54
GPHN-215ENST00000557654 NR1I2O75469 434 aa11.66□□□□□ -0.54
GPHN-215ENST00000557654 IFFO2Q5TF58 517 aa11.66□□□□□ -0.54
GPHN-215ENST00000557654 NEUROD2Q15784 382 aa11.64□□□□□ -0.55
GPHN-215ENST00000557654 A0A0G2JS52 829 aa11.63□□□□□ -0.55
GPHN-215ENST00000557654 NDUFV2P19404 249 aa11.63□□□□□ -0.55
GPHN-215ENST00000557654 TBC1D2Q9BYX2 928 aa11.63□□□□□ -0.55
GPHN-215ENST00000557654 MOXD2PA6NHM9 499 aa11.62□□□□□ -0.55
GPHN-215ENST00000557654 USP46P62068 366 aa11.62□□□□□ -0.55
GPHN-215ENST00000557654 GRIPAP1Q4V328 841 aa11.62□□□□□ -0.55
GPHN-215ENST00000557654 RNF19BQ6ZMZ0 732 aa11.62□□□□□ -0.55
GPHN-215ENST00000557654 FAM117AQ9C073 453 aa11.62□□□□□ -0.55
GPHN-215ENST00000557654 BRPF1P55201 1214 aaPredicted RBP11.61□□□□□ -0.55
GPHN-215ENST00000557654 THAP11Q96EK4 314 aa11.6□□□□□ -0.55
GPHN-215ENST00000557654 ADH1BP00325 375 aa11.59□□□□□ -0.55
GPHN-215ENST00000557654 SPSB2Q99619 263 aa11.59□□□□□ -0.55
GPHN-215ENST00000557654 PCDHGC3Q9UN70 934 aa11.59□□□□□ -0.55
GPHN-215ENST00000557654 PPP1R18Q6NYC8 613 aa11.58□□□□□ -0.56
GPHN-215ENST00000557654 SYMPKQ92797 1274 aaKnown RBP11.58□□□□□ -0.56
GPHN-215ENST00000557654 S1PR4O95977 384 aa11.57□□□□□ -0.56
GPHN-215ENST00000557654 FDX1P10109 184 aa11.57□□□□□ -0.56
GPHN-215ENST00000557654 BRICD5Q6PL45 260 aa11.57□□□□□ -0.56
GPHN-215ENST00000557654 FMNL1O95466 1100 aaPredicted RBP11.56□□□□□ -0.56
GPHN-215ENST00000557654 PLEKHG3A1L390 1219 aa11.55□□□□□ -0.56
GPHN-215ENST00000557654 MYSM1Q5VVJ2 828 aa11.55□□□□□ -0.56
GPHN-215ENST00000557654 FAM160A2Q8N612 972 aaPredicted RBP11.55□□□□□ -0.56
GPHN-215ENST00000557654 PRDM9Q9NQV7 894 aa11.55□□□□□ -0.56
GPHN-215ENST00000557654 PPEF1O14829 653 aaPredicted RBP11.54□□□□□ -0.56
GPHN-215ENST00000557654 Q3C1V9 767 aa11.53□□□□□ -0.56
GPHN-215ENST00000557654 RSBN1LQ6PCB5 846 aaPredicted RBP11.53□□□□□ -0.56
GPHN-215ENST00000557654 SLC6A16Q9GZN6 736 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms