RNA–Protein interactions for RNA: ENST00000557434.5

LGMN-216, Transcript of legumain, humanhuman

TSL 5 BASIC

Gene LGMN, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-216ENST00000557434 NRXN1Q9ULB1 1477 aa24.83■■□□□ 1.57
LGMN-216ENST00000557434 ADGRF5Q8IZF2 1346 aa24.81■■□□□ 1.56
LGMN-216ENST00000557434 SETD1BQ9UPS6 1966 aaKnown RBP24.8■■□□□ 1.56
LGMN-216ENST00000557434 RPGRIP1LQ68CZ1 1315 aa24.79■■□□□ 1.56
LGMN-216ENST00000557434 RALGAPBQ86X10 1494 aa24.79■■□□□ 1.56
LGMN-216ENST00000557434 ZFYVE9O95405 1425 aa24.78■■□□□ 1.56
LGMN-216ENST00000557434 ZNF142P52746 1687 aaPredicted RBP24.77■■□□□ 1.56
LGMN-216ENST00000557434 NUTM2DQ5VT03 806 aaPredicted RBP24.77■■□□□ 1.56
LGMN-216ENST00000557434 CEP170BQ9Y4F5 1589 aaPredicted RBP24.77■■□□□ 1.56
LGMN-216ENST00000557434 STAC3Q96MF2 364 aa24.76■■□□□ 1.55
LGMN-216ENST00000557434 STAG3Q9UJ98 1225 aa24.75■■□□□ 1.55
LGMN-216ENST00000557434 PIK3C2GO75747 1445 aa24.75■■□□□ 1.55
LGMN-216ENST00000557434 RIMS2Q9UQ26 1411 aa24.74■■□□□ 1.55
LGMN-216ENST00000557434 NBPF1Q3BBV0 1214 aa24.72■■□□□ 1.55
LGMN-216ENST00000557434 KIAA1210Q9ULL0 1709 aa24.72■■□□□ 1.55
LGMN-216ENST00000557434 TMEM2Q9UHN6 1383 aa24.71■■□□□ 1.55
LGMN-216ENST00000557434 SLIT1O75093 1534 aa24.69■■□□□ 1.54
LGMN-216ENST00000557434 ARHGAP23Q9P227 1491 aa24.69■■□□□ 1.54
LGMN-216ENST00000557434 GPRASP1Q5JY77 1395 aa24.69■■□□□ 1.54
LGMN-216ENST00000557434 VGFO15240 615 aaPredicted RBP24.67■■□□□ 1.54
LGMN-216ENST00000557434 CFAP70Q5T0N1 1121 aa24.67■■□□□ 1.54
LGMN-216ENST00000557434 ROCK2O75116 1388 aaKnown RBP24.66■■□□□ 1.54
LGMN-216ENST00000557434 LAMC1P11047 1609 aa24.66■■□□□ 1.54
LGMN-216ENST00000557434 NRXN3Q9Y4C0 1643 aa24.66■■□□□ 1.54
LGMN-216ENST00000557434 LTKP29376 864 aa24.65■■□□□ 1.54
LGMN-216ENST00000557434 SETD1AO15047 1707 aaKnown RBP24.63■■□□□ 1.53
LGMN-216ENST00000557434 ADGRB1O14514 1584 aa24.63■■□□□ 1.53
LGMN-216ENST00000557434 HIRIP3Q9BW71 556 aaPredicted RBP24.62■■□□□ 1.53
LGMN-216ENST00000557434 SENP3Q9H4L4 574 aaPredicted RBP24.62■■□□□ 1.53
LGMN-216ENST00000557434 C14orf93Q9H972 538 aaKnown RBP24.62■■□□□ 1.53
LGMN-216ENST00000557434 ASXL1Q8IXJ9 1541 aa24.62■■□□□ 1.53
LGMN-216ENST00000557434 IQGAP1P46940 1657 aa24.61■■□□□ 1.53
LGMN-216ENST00000557434 THEMISQ8N1K5 641 aaPredicted RBP24.61■■□□□ 1.53
LGMN-216ENST00000557434 CARD11Q9BXL7 1154 aa24.61■■□□□ 1.53
LGMN-216ENST00000557434 SETBP1Q9Y6X0 1596 aa24.61■■□□□ 1.53
LGMN-216ENST00000557434 ALKQ9UM73 1620 aa24.6■■□□□ 1.53
LGMN-216ENST00000557434 HSPA5P11021 654 aaKnown RBP24.59■■□□□ 1.53
LGMN-216ENST00000557434 USP47Q96K76 1375 aa24.59■■□□□ 1.53
LGMN-216ENST00000557434 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.58■■□□□ 1.53
LGMN-216ENST00000557434 ZNF316A6NFI3 1004 aaPredicted RBP24.57■■□□□ 1.52
LGMN-216ENST00000557434 EIF4G2P78344 907 aaKnown RBP eCLIP24.56■■□□□ 1.52
LGMN-216ENST00000557434 TXNDC2Q86VQ3 553 aa24.55■■□□□ 1.52
LGMN-216ENST00000557434 SCAF11Q99590 1463 aaKnown RBP24.54■■□□□ 1.52
LGMN-216ENST00000557434 PLEKHG1Q9ULL1 1385 aa24.54■■□□□ 1.52
LGMN-216ENST00000557434 TMEM132EQ6IEE7 984 aa24.54■■□□□ 1.52
LGMN-216ENST00000557434 ADAMTS13Q76LX8 1427 aa24.53■■□□□ 1.52
LGMN-216ENST00000557434 HDGFP51858 240 aaKnown RBP24.52■■□□□ 1.52
LGMN-216ENST00000557434 MED14O60244 1454 aa24.51■■□□□ 1.51
LGMN-216ENST00000557434 LMTK3Q96Q04 1460 aa24.5■■□□□ 1.51
LGMN-216ENST00000557434 EID1Q9Y6B2 187 aa24.49■■□□□ 1.51
LGMN-216ENST00000557434 ST20-MTHFSA0A0A6YYL1 179 aa24.48■■□□□ 1.51
LGMN-216ENST00000557434 POLR1AO95602 1720 aaPredicted RBP24.48■■□□□ 1.51
LGMN-216ENST00000557434 METP08581 1390 aa24.47■■□□□ 1.51
LGMN-216ENST00000557434 ARHGEF28Q8N1W1 1705 aaKnown RBP24.46■■□□□ 1.51
LGMN-216ENST00000557434 C11orf95C9JLR9 678 aaPredicted RBP24.45■■□□□ 1.5
LGMN-216ENST00000557434 ANKLE2Q86XL3 938 aa24.43■■□□□ 1.5
LGMN-216ENST00000557434 YTHDC2Q9H6S0 1430 aaKnown RBP24.43■■□□□ 1.5
LGMN-216ENST00000557434 TESK2Q96S53 571 aa24.42■■□□□ 1.5
LGMN-216ENST00000557434 HSPA2P54652 639 aa24.42■■□□□ 1.5
LGMN-216ENST00000557434 SLC26A8Q96RN1 970 aa24.42■■□□□ 1.5
LGMN-216ENST00000557434 TRAK1Q9UPV9 953 aa24.41■■□□□ 1.5
LGMN-216ENST00000557434 DIP2AQ14689 1571 aa24.4■■□□□ 1.5
LGMN-216ENST00000557434 NCKAP5LQ9HCH0 1330 aa24.39■■□□□ 1.5
LGMN-216ENST00000557434 PTPRUQ92729 1446 aa24.38■■□□□ 1.49
LGMN-216ENST00000557434 BCANQ96GW7 911 aa24.38■■□□□ 1.49
LGMN-216ENST00000557434 WASHC2AQ641Q2 1341 aa24.37■■□□□ 1.49
LGMN-216ENST00000557434 LRPPRCP42704 1394 aaKnown RBP24.37■■□□□ 1.49
LGMN-216ENST00000557434 KNDC1Q76NI1 1749 aa24.37■■□□□ 1.49
LGMN-216ENST00000557434 STK26Q9P289 416 aa24.37■■□□□ 1.49
LGMN-216ENST00000557434 TBX22Q9Y458 520 aa24.37■■□□□ 1.49
LGMN-216ENST00000557434 STRCQ7RTU9 1775 aa24.36■■□□□ 1.49
LGMN-216ENST00000557434 QRICH2Q9H0J4 1663 aa24.36■■□□□ 1.49
LGMN-216ENST00000557434 NPHP4O75161 1426 aaPredicted RBP24.36■■□□□ 1.49
LGMN-216ENST00000557434 EIF3AQ14152 1382 aaKnown RBP24.35■■□□□ 1.49
LGMN-216ENST00000557434 DLC1Q96QB1 1528 aa24.34■■□□□ 1.49
LGMN-216ENST00000557434 TECPR2O15040 1411 aa24.34■■□□□ 1.49
LGMN-216ENST00000557434 ABCC11Q96J66 1382 aa24.34■■□□□ 1.49
LGMN-216ENST00000557434 DISP3Q9P2K9 1392 aa24.32■■□□□ 1.48
LGMN-216ENST00000557434 KIF7Q2M1P5 1343 aa24.32■■□□□ 1.48
LGMN-216ENST00000557434 CPS1P31327 1500 aa24.32■■□□□ 1.48
LGMN-216ENST00000557434 XRN1Q8IZH2 1706 aaKnown RBP24.32■■□□□ 1.48
LGMN-216ENST00000557434 CCDC7Q96M83 1385 aa24.31■■□□□ 1.48
LGMN-216ENST00000557434 CENPJQ9HC77 1338 aaPredicted RBP24.31■■□□□ 1.48
LGMN-216ENST00000557434 CHD2O14647 1828 aaKnown RBP24.3■■□□□ 1.48
LGMN-216ENST00000557434 SBNO2Q9Y2G9 1366 aa24.3■■□□□ 1.48
LGMN-216ENST00000557434 PLEKHH1Q9ULM0 1364 aa24.29■■□□□ 1.48
LGMN-216ENST00000557434 PRAM1Q96QH2 718 aa24.27■■□□□ 1.48
LGMN-216ENST00000557434 ROBO2Q9HCK4 1378 aa24.27■■□□□ 1.48
LGMN-216ENST00000557434 WAPLQ7Z5K2 1190 aa24.26■■□□□ 1.47
LGMN-216ENST00000557434 PIK3R4Q99570 1358 aa24.25■■□□□ 1.47
LGMN-216ENST00000557434 SAFB2Q14151 953 aaKnown RBP eCLIP24.24■■□□□ 1.47
LGMN-216ENST00000557434 TULP4Q9NRJ4 1543 aa24.24■■□□□ 1.47
LGMN-216ENST00000557434 FAM135BQ49AJ0 1406 aa24.24■■□□□ 1.47
LGMN-216ENST00000557434 AMOTL2Q9Y2J4 779 aa24.24■■□□□ 1.47
LGMN-216ENST00000557434 SIRT1Q96EB6 747 aa24.21■■□□□ 1.47
LGMN-216ENST00000557434 PTCH1Q13635 1447 aa24.21■■□□□ 1.47
LGMN-216ENST00000557434 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.21■■□□□ 1.47
LGMN-216ENST00000557434 TMF1P82094 1093 aa24.21■■□□□ 1.47
LGMN-216ENST00000557434 DDX10Q13206 875 aaKnown RBP24.21■■□□□ 1.47
LGMN-216ENST00000557434 NWD1Q149M9 1564 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms