RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 TMEM2Q9UHN6 1383 aa17.41■□□□□ 0.38
HNRNPC-231ENST00000557336 NOS1P29475 1434 aa17.41■□□□□ 0.38
HNRNPC-231ENST00000557336 PIK3C2BO00750 1634 aa17.41■□□□□ 0.38
HNRNPC-231ENST00000557336 SYNMO15061 1565 aa17.4■□□□□ 0.38
HNRNPC-231ENST00000557336 SPINK5Q9NQ38 1064 aaPredicted RBP17.39■□□□□ 0.37
HNRNPC-231ENST00000557336 FAM50AQ14320 339 aaKnown RBP17.38■□□□□ 0.37
HNRNPC-231ENST00000557336 EFCAB6Q5THR3 1501 aa17.37■□□□□ 0.37
HNRNPC-231ENST00000557336 EID1Q9Y6B2 187 aa17.36■□□□□ 0.37
HNRNPC-231ENST00000557336 ANKRD50Q9ULJ7 1429 aa17.36■□□□□ 0.37
HNRNPC-231ENST00000557336 TET3O43151 1660 aa17.35■□□□□ 0.37
HNRNPC-231ENST00000557336 KDM5AP29375 1690 aaKnown RBP17.33■□□□□ 0.37
HNRNPC-231ENST00000557336 MED1Q15648 1581 aaPredicted RBP17.32■□□□□ 0.36
HNRNPC-231ENST00000557336 SLC26A8Q96RN1 970 aa17.32■□□□□ 0.36
HNRNPC-231ENST00000557336 STAG3Q9UJ98 1225 aa17.32■□□□□ 0.36
HNRNPC-231ENST00000557336 XIRP1Q702N8 1843 aaKnown RBP17.32■□□□□ 0.36
HNRNPC-231ENST00000557336 SLC52A1Q9NWF4 448 aa17.31■□□□□ 0.36
HNRNPC-231ENST00000557336 ADGRB3O60242 1522 aa17.3■□□□□ 0.36
HNRNPC-231ENST00000557336 KCNA6P17658 529 aa17.29■□□□□ 0.36
HNRNPC-231ENST00000557336 RPRD2Q5VT52 1461 aaKnown RBP17.29■□□□□ 0.36
HNRNPC-231ENST00000557336 ZFYVE9O95405 1425 aa17.28■□□□□ 0.36
HNRNPC-231ENST00000557336 TMEM94Q12767 1356 aa17.28■□□□□ 0.36
HNRNPC-231ENST00000557336 RBM33Q96EV2 1170 aaKnown RBP17.27■□□□□ 0.36
HNRNPC-231ENST00000557336 ROCK1Q13464 1354 aa17.26■□□□□ 0.35
HNRNPC-231ENST00000557336 UNC13BO14795 1591 aa17.25■□□□□ 0.35
HNRNPC-231ENST00000557336 ATF5Q9Y2D1 282 aaPredicted RBP17.25■□□□□ 0.35
HNRNPC-231ENST00000557336 SAMD1Q6SPF0 538 aaPredicted RBP17.24■□□□□ 0.35
HNRNPC-231ENST00000557336 FAM135BQ49AJ0 1406 aa17.23■□□□□ 0.35
HNRNPC-231ENST00000557336 TMEM131LA2VDJ0 1609 aa17.23■□□□□ 0.35
HNRNPC-231ENST00000557336 PROSER2Q86WR7 435 aaPredicted RBP17.22■□□□□ 0.35
HNRNPC-231ENST00000557336 PPARGC1BQ86YN6 1023 aaKnown RBP17.22■□□□□ 0.35
HNRNPC-231ENST00000557336 PLEKHG1Q9ULL1 1385 aa17.22■□□□□ 0.35
HNRNPC-231ENST00000557336 RIMS2Q9UQ26 1411 aa17.21■□□□□ 0.35
HNRNPC-231ENST00000557336 NWD1Q149M9 1564 aa17.21■□□□□ 0.35
HNRNPC-231ENST00000557336 MYO5BQ9ULV0 1848 aa17.2■□□□□ 0.34
HNRNPC-231ENST00000557336 CAPN15O75808 1086 aa17.2■□□□□ 0.34
HNRNPC-231ENST00000557336 E9PCH4 1651 aa17.2■□□□□ 0.34
HNRNPC-231ENST00000557336 RGS17Q9UGC6 210 aaPredicted RBP17.19■□□□□ 0.34
HNRNPC-231ENST00000557336 GCC2Q8IWJ2 1684 aa17.19■□□□□ 0.34
HNRNPC-231ENST00000557336 NKTRP30414 1462 aaKnown RBP17.18■□□□□ 0.34
HNRNPC-231ENST00000557336 IQGAP3Q86VI3 1631 aa17.18■□□□□ 0.34
HNRNPC-231ENST00000557336 NUP155O75694 1391 aa17.17■□□□□ 0.34
HNRNPC-231ENST00000557336 ITGAEP38570 1179 aa17.17■□□□□ 0.34
HNRNPC-231ENST00000557336 ADAMTS13Q76LX8 1427 aa17.17■□□□□ 0.34
HNRNPC-231ENST00000557336 TBX22Q9Y458 520 aa17.17■□□□□ 0.34
HNRNPC-231ENST00000557336 NUTM2DQ5VT03 806 aaPredicted RBP17.16■□□□□ 0.34
HNRNPC-231ENST00000557336 BCANQ96GW7 911 aa17.16■□□□□ 0.34
HNRNPC-231ENST00000557336 CHGAP10645 457 aaKnown RBP17.14■□□□□ 0.33
HNRNPC-231ENST00000557336 CHD2O14647 1828 aaKnown RBP17.14■□□□□ 0.33
HNRNPC-231ENST00000557336 PPP1R15AO75807 674 aaPredicted RBP17.13■□□□□ 0.33
HNRNPC-231ENST00000557336 HDGFP51858 240 aaKnown RBP17.13■□□□□ 0.33
HNRNPC-231ENST00000557336 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.13■□□□□ 0.33
HNRNPC-231ENST00000557336 ROBO1Q9Y6N7 1651 aa17.13■□□□□ 0.33
HNRNPC-231ENST00000557336 SLAIN2Q9P270 581 aa17.12■□□□□ 0.33
HNRNPC-231ENST00000557336 MSH6P52701 1360 aa17.1■□□□□ 0.33
HNRNPC-231ENST00000557336 PTPRUQ92729 1446 aa17.1■□□□□ 0.33
HNRNPC-231ENST00000557336 NCOA3Q9Y6Q9 1424 aa17.08■□□□□ 0.32
HNRNPC-231ENST00000557336 PIK3R4Q99570 1358 aa17.07■□□□□ 0.32
HNRNPC-231ENST00000557336 RRBP1Q9P2E9 1410 aaKnown RBP17.06■□□□□ 0.32
HNRNPC-231ENST00000557336 POTEAQ6S8J7 498 aa17.06■□□□□ 0.32
HNRNPC-231ENST00000557336 AMOTL2Q9Y2J4 779 aa17.05■□□□□ 0.32
HNRNPC-231ENST00000557336 DIP2AQ14689 1571 aa17.05■□□□□ 0.32
HNRNPC-231ENST00000557336 NAIPQ13075 1403 aa17.04■□□□□ 0.32
HNRNPC-231ENST00000557336 NRXN3Q9Y4C0 1643 aa17.04■□□□□ 0.32
HNRNPC-231ENST00000557336 C19orf44Q9H6X5 657 aa17.03■□□□□ 0.32
HNRNPC-231ENST00000557336 METP08581 1390 aa17.02■□□□□ 0.31
HNRNPC-231ENST00000557336 DSG3P32926 999 aa17.01■□□□□ 0.31
HNRNPC-231ENST00000557336 SETBP1Q9Y6X0 1596 aa17.01■□□□□ 0.31
HNRNPC-231ENST00000557336 SPHKAPQ2M3C7 1700 aa17.01■□□□□ 0.31
HNRNPC-231ENST00000557336 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.01■□□□□ 0.31
HNRNPC-231ENST00000557336 TRPM2O94759 1503 aa17.01■□□□□ 0.31
HNRNPC-231ENST00000557336 COL16A1Q07092 1604 aaPredicted RBP17■□□□□ 0.31
HNRNPC-231ENST00000557336 JCADQ9P266 1359 aa17■□□□□ 0.31
HNRNPC-231ENST00000557336 PHLPP1O60346 1717 aa16.99■□□□□ 0.31
HNRNPC-231ENST00000557336 CADPS2Q86UW7 1296 aa16.99■□□□□ 0.31
HNRNPC-231ENST00000557336 CLTCL1P53675 1640 aa16.99■□□□□ 0.31
HNRNPC-231ENST00000557336 C14orf37Q86TY3 774 aa16.98■□□□□ 0.31
HNRNPC-231ENST00000557336 XRN1Q8IZH2 1706 aaKnown RBP16.98■□□□□ 0.31
HNRNPC-231ENST00000557336 NEXMIFQ5QGS0 1516 aa16.97■□□□□ 0.31
HNRNPC-231ENST00000557336 ZNF326Q5BKZ1 582 aaKnown RBP16.97■□□□□ 0.31
HNRNPC-231ENST00000557336 BRINP3Q76B58 766 aa16.97■□□□□ 0.31
HNRNPC-231ENST00000557336 ZNF219Q9P2Y4 722 aaPredicted RBP16.97■□□□□ 0.31
HNRNPC-231ENST00000557336 ABCB7O75027 752 aa16.96■□□□□ 0.31
HNRNPC-231ENST00000557336 ATXN8OSP0DMR3 200 aa16.96■□□□□ 0.31
HNRNPC-231ENST00000557336 ATF3P18847 181 aa16.96■□□□□ 0.31
HNRNPC-231ENST00000557336 LRP6O75581 1613 aa16.96■□□□□ 0.3
HNRNPC-231ENST00000557336 AHDC1Q5TGY3 1603 aaPredicted RBP16.95■□□□□ 0.3
HNRNPC-231ENST00000557336 HFM1A2PYH4 1435 aa16.95■□□□□ 0.3
HNRNPC-231ENST00000557336 DCCP43146 1447 aa16.93■□□□□ 0.3
HNRNPC-231ENST00000557336 MST1RQ04912 1400 aa16.93■□□□□ 0.3
HNRNPC-231ENST00000557336 SPATA31A6Q5VVP1 1343 aa16.91■□□□□ 0.3
HNRNPC-231ENST00000557336 TRIM52Q96A61 297 aa16.89■□□□□ 0.29
HNRNPC-231ENST00000557336 ASXL1Q8IXJ9 1541 aa16.89■□□□□ 0.29
HNRNPC-231ENST00000557336 ADGRL3Q9HAR2 1447 aa16.88■□□□□ 0.29
HNRNPC-231ENST00000557336 DDX17Q92841 729 aaKnown RBP16.87■□□□□ 0.29
HNRNPC-231ENST00000557336 ROBO2Q9HCK4 1378 aa16.87■□□□□ 0.29
HNRNPC-231ENST00000557336 SETD5Q9C0A6 1442 aa16.87■□□□□ 0.29
HNRNPC-231ENST00000557336 SHPRHQ149N8 1683 aa16.86■□□□□ 0.29
HNRNPC-231ENST00000557336 SETD1AO15047 1707 aaKnown RBP16.86■□□□□ 0.29
HNRNPC-231ENST00000557336 VGFO15240 615 aaPredicted RBP16.85■□□□□ 0.29
HNRNPC-231ENST00000557336 NALCNQ8IZF0 1738 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms