RNA–Protein interactions for RNA: ENST00000555822.5

CCDC85C-204, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5 BASIC

Gene CCDC85C, Length 930 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-204ENST00000555822 EFCAB6Q5THR3 1501 aa24.4■■□□□ 1.5
CCDC85C-204ENST00000555822 STAG3Q9UJ98 1225 aa24.37■■□□□ 1.49
CCDC85C-204ENST00000555822 UNC13BO14795 1591 aa24.36■■□□□ 1.49
CCDC85C-204ENST00000555822 NWD1Q149M9 1564 aa24.36■■□□□ 1.49
CCDC85C-204ENST00000555822 NOS1P29475 1434 aa24.35■■□□□ 1.49
CCDC85C-204ENST00000555822 KDM5AP29375 1690 aaKnown RBP24.34■■□□□ 1.49
CCDC85C-204ENST00000555822 SLAIN2Q9P270 581 aa24.32■■□□□ 1.48
CCDC85C-204ENST00000555822 PHLPP1O60346 1717 aa24.32■■□□□ 1.48
CCDC85C-204ENST00000555822 NKTRP30414 1462 aaKnown RBP24.31■■□□□ 1.48
CCDC85C-204ENST00000555822 LRP6O75581 1613 aa24.3■■□□□ 1.48
CCDC85C-204ENST00000555822 RPRD2Q5VT52 1461 aaKnown RBP24.3■■□□□ 1.48
CCDC85C-204ENST00000555822 ADGRB3O60242 1522 aa24.29■■□□□ 1.48
CCDC85C-204ENST00000555822 JCADQ9P266 1359 aa24.29■■□□□ 1.48
CCDC85C-204ENST00000555822 GCC2Q8IWJ2 1684 aa24.28■■□□□ 1.48
CCDC85C-204ENST00000555822 MSH6P52701 1360 aa24.28■■□□□ 1.48
CCDC85C-204ENST00000555822 COL16A1Q07092 1604 aaPredicted RBP24.28■■□□□ 1.48
CCDC85C-204ENST00000555822 ZFYVE9O95405 1425 aa24.26■■□□□ 1.47
CCDC85C-204ENST00000555822 IQGAP3Q86VI3 1631 aa24.25■■□□□ 1.47
CCDC85C-204ENST00000555822 CHD2O14647 1828 aaKnown RBP24.25■■□□□ 1.47
CCDC85C-204ENST00000555822 MYO5BQ9ULV0 1848 aa24.24■■□□□ 1.47
CCDC85C-204ENST00000555822 UPF1Q92900 1129 aaKnown RBP eCLIP24.24■■□□□ 1.472e-7■■■□□ 16
CCDC85C-204ENST00000555822 NUP155O75694 1391 aa24.23■■□□□ 1.47
CCDC85C-204ENST00000555822 SLC52A1Q9NWF4 448 aa24.22■■□□□ 1.47
CCDC85C-204ENST00000555822 HFM1A2PYH4 1435 aa24.21■■□□□ 1.47
CCDC85C-204ENST00000555822 NAIPQ13075 1403 aa24.21■■□□□ 1.47
CCDC85C-204ENST00000555822 BCANQ96GW7 911 aa24.21■■□□□ 1.47
CCDC85C-204ENST00000555822 PLEKHG1Q9ULL1 1385 aa24.2■■□□□ 1.46
CCDC85C-204ENST00000555822 E9PCH4 1651 aa24.19■■□□□ 1.46
CCDC85C-204ENST00000555822 RIMS2Q9UQ26 1411 aa24.18■■□□□ 1.46
CCDC85C-204ENST00000555822 TRIM52Q96A61 297 aa24.17■■□□□ 1.46
CCDC85C-204ENST00000555822 ADAMTS13Q76LX8 1427 aa24.15■■□□□ 1.46
CCDC85C-204ENST00000555822 TMEM131LA2VDJ0 1609 aa24.14■■□□□ 1.46
CCDC85C-204ENST00000555822 NUTM2DQ5VT03 806 aaPredicted RBP24.14■■□□□ 1.45
CCDC85C-204ENST00000555822 TBX22Q9Y458 520 aa24.14■■□□□ 1.45
CCDC85C-204ENST00000555822 SPATA31A6Q5VVP1 1343 aa24.13■■□□□ 1.45
CCDC85C-204ENST00000555822 AHDC1Q5TGY3 1603 aaPredicted RBP24.12■■□□□ 1.45
CCDC85C-204ENST00000555822 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.12■■□□□ 1.45
CCDC85C-204ENST00000555822 NCOA3Q9Y6Q9 1424 aa24.1■■□□□ 1.45
CCDC85C-204ENST00000555822 SRCAPQ6ZRS2 3230 aa24.09■■□□□ 1.45
CCDC85C-204ENST00000555822 SHPRHQ149N8 1683 aa24.09■■□□□ 1.45
CCDC85C-204ENST00000555822 DIP2AQ14689 1571 aa24.09■■□□□ 1.45
CCDC85C-204ENST00000555822 MEX3CQ5U5Q3 659 aaKnown RBP24.09■■□□□ 1.45
CCDC85C-204ENST00000555822 ZNF772Q68DY9 489 aaPredicted RBP24.09■■□□□ 1.45
CCDC85C-204ENST00000555822 PPP1R15AO75807 674 aaPredicted RBP24.08■■□□□ 1.45
CCDC85C-204ENST00000555822 PTPRUQ92729 1446 aa24.08■■□□□ 1.44
CCDC85C-204ENST00000555822 BRINP3Q76B58 766 aa24.06■■□□□ 1.44
CCDC85C-204ENST00000555822 C19orf44Q9H6X5 657 aa24.06■■□□□ 1.44
CCDC85C-204ENST00000555822 C14orf37Q86TY3 774 aa24.05■■□□□ 1.44
CCDC85C-204ENST00000555822 CHGAP10645 457 aaKnown RBP24.04■■□□□ 1.44
CCDC85C-204ENST00000555822 CADPS2Q86UW7 1296 aa24.04■■□□□ 1.44
CCDC85C-204ENST00000555822 NUTM2BA6NNL0 878 aaPredicted RBP24.03■■□□□ 1.44
CCDC85C-204ENST00000555822 NUTM2EB1AL46 878 aaPredicted RBP24.03■■□□□ 1.44
CCDC85C-204ENST00000555822 RXRBP28702 533 aa24.03■■□□□ 1.44
CCDC85C-204ENST00000555822 HDGFP51858 240 aaKnown RBP24.03■■□□□ 1.44
CCDC85C-204ENST00000555822 NUTM2AQ8IVF1 878 aaPredicted RBP24.03■■□□□ 1.44
CCDC85C-204ENST00000555822 SPHKAPQ2M3C7 1700 aa24.03■■□□□ 1.44
CCDC85C-204ENST00000555822 ATF3P18847 181 aa24.01■■□□□ 1.43
CCDC85C-204ENST00000555822 SETD5Q9C0A6 1442 aa24.01■■□□□ 1.43
CCDC85C-204ENST00000555822 AMOTL2Q9Y2J4 779 aa24■■□□□ 1.43
CCDC85C-204ENST00000555822 AFF2P51816 1311 aa23.99■■□□□ 1.43
CCDC85C-204ENST00000555822 ACIN1Q9UKV3 1341 aaKnown RBP23.99■■□□□ 1.43
CCDC85C-204ENST00000555822 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.98■■□□□ 1.43
CCDC85C-204ENST00000555822 PIK3R4Q99570 1358 aa23.98■■□□□ 1.43
CCDC85C-204ENST00000555822 CDK12Q9NYV4 1490 aaPredicted RBP23.97■■□□□ 1.43
CCDC85C-204ENST00000555822 DDX17Q92841 729 aaKnown RBP23.96■■□□□ 1.43
CCDC85C-204ENST00000555822 TRPM2O94759 1503 aa23.94■■□□□ 1.42
CCDC85C-204ENST00000555822 ASXL1Q8IXJ9 1541 aa23.94■■□□□ 1.42
CCDC85C-204ENST00000555822 RGS12O14924 1447 aa23.94■■□□□ 1.42
CCDC85C-204ENST00000555822 SLC4A1APQ9BWU0 796 aaKnown RBP23.94■■□□□ 1.42
CCDC85C-204ENST00000555822 MST1RQ04912 1400 aa23.93■■□□□ 1.42
CCDC85C-204ENST00000555822 NRXN3Q9Y4C0 1643 aa23.92■■□□□ 1.42
CCDC85C-204ENST00000555822 RAB3GAP2Q9H2M9 1393 aa23.91■■□□□ 1.42
CCDC85C-204ENST00000555822 NHSL1Q5SYE7 1610 aa23.91■■□□□ 1.42
CCDC85C-204ENST00000555822 XRN1Q8IZH2 1706 aaKnown RBP23.9■■□□□ 1.42
CCDC85C-204ENST00000555822 CLTCL1P53675 1640 aa23.9■■□□□ 1.42
CCDC85C-204ENST00000555822 DCCP43146 1447 aa23.88■■□□□ 1.41
CCDC85C-204ENST00000555822 METP08581 1390 aa23.88■■□□□ 1.41
CCDC85C-204ENST00000555822 HRCP23327 699 aa23.87■■□□□ 1.41
CCDC85C-204ENST00000555822 C8orf37Q96NL8 207 aa23.87■■□□□ 1.41
CCDC85C-204ENST00000555822 QTRT2Q9H974 415 aaKnown RBP23.87■■□□□ 1.41
CCDC85C-204ENST00000555822 PNPLA6Q8IY17 1366 aa23.87■■□□□ 1.41
CCDC85C-204ENST00000555822 KIF1BO60333 1816 aa23.87■■□□□ 1.41
CCDC85C-204ENST00000555822 ZNF326Q5BKZ1 582 aaKnown RBP23.86■■□□□ 1.41
CCDC85C-204ENST00000555822 RBM6P78332 1123 aaKnown RBP23.84■■□□□ 1.41
CCDC85C-204ENST00000555822 LRRC59Q96AG4 307 aaKnown RBP23.83■■□□□ 1.41
CCDC85C-204ENST00000555822 SETBP1Q9Y6X0 1596 aa23.82■■□□□ 1.4
CCDC85C-204ENST00000555822 TRIM26Q12899 539 aaPredicted RBP23.81■■□□□ 1.4
CCDC85C-204ENST00000555822 MPHOSPH9Q99550 1183 aa23.81■■□□□ 1.4
CCDC85C-204ENST00000555822 NEXMIFQ5QGS0 1516 aa23.79■■□□□ 1.4
CCDC85C-204ENST00000555822 ADAMTS2O95450 1211 aa23.78■■□□□ 1.4
CCDC85C-204ENST00000555822 FOXD1Q16676 465 aa23.78■■□□□ 1.4
CCDC85C-204ENST00000555822 ADGRL3Q9HAR2 1447 aa23.77■■□□□ 1.4
CCDC85C-204ENST00000555822 NALCNQ8IZF0 1738 aa23.77■■□□□ 1.4
CCDC85C-204ENST00000555822 EP400Q96L91 3159 aa23.75■■□□□ 1.39
CCDC85C-204ENST00000555822 C1orf167Q5SNV9 1468 aa23.75■■□□□ 1.39
CCDC85C-204ENST00000555822 NGLY1Q96IV0 654 aa23.74■■□□□ 1.39
CCDC85C-204ENST00000555822 RPGRIP1LQ68CZ1 1315 aa23.74■■□□□ 1.39
CCDC85C-204ENST00000555822 CCDC144AA2RUR9 1427 aa23.73■■□□□ 1.39
CCDC85C-204ENST00000555822 ORAI2Q96SN7 254 aa23.72■■□□□ 1.39
CCDC85C-204ENST00000555822 LAMC1P11047 1609 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms