RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 NUTM2BA6NNL0 878 aaPredicted RBP13.19□□□□□ -0.3
NEK9-206ENST00000555537 NUTM2EB1AL46 878 aaPredicted RBP13.19□□□□□ -0.3
NEK9-206ENST00000555537 NUTM2AQ8IVF1 878 aaPredicted RBP13.19□□□□□ -0.3
NEK9-206ENST00000555537 SLC52A1Q9NWF4 448 aa13.19□□□□□ -0.3
NEK9-206ENST00000555537 NOS1P29475 1434 aa13.19□□□□□ -0.3
NEK9-206ENST00000555537 DAPK1P53355 1430 aa13.19□□□□□ -0.3
NEK9-206ENST00000555537 NWD1Q149M9 1564 aa13.19□□□□□ -0.3
NEK9-206ENST00000555537 PPP1R15AO75807 674 aaPredicted RBP13.18□□□□□ -0.3
NEK9-206ENST00000555537 ZNF772Q68DY9 489 aaPredicted RBP13.18□□□□□ -0.3
NEK9-206ENST00000555537 KDM5AP29375 1690 aaKnown RBP13.18□□□□□ -0.3
NEK9-206ENST00000555537 COL16A1Q07092 1604 aaPredicted RBP13.17□□□□□ -0.3
NEK9-206ENST00000555537 CHGAP10645 457 aaKnown RBP13.17□□□□□ -0.3
NEK9-206ENST00000555537 RXRBP28702 533 aa13.17□□□□□ -0.3
NEK9-206ENST00000555537 ADGRB3O60242 1522 aa13.17□□□□□ -0.3
NEK9-206ENST00000555537 LMTK2Q8IWU2 1503 aa13.17□□□□□ -0.3
NEK9-206ENST00000555537 PTPN23Q9H3S7 1636 aa13.17□□□□□ -0.3
NEK9-206ENST00000555537 SPATA31A6Q5VVP1 1343 aa13.16□□□□□ -0.3
NEK9-206ENST00000555537 CROCC2H7BZ55 1655 aa13.16□□□□□ -0.3
NEK9-206ENST00000555537 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
NEK9-206ENST00000555537 CHD2O14647 1828 aaKnown RBP13.16□□□□□ -0.3
NEK9-206ENST00000555537 RIMS2Q9UQ26 1411 aa13.15□□□□□ -0.3
NEK9-206ENST00000555537 ATF3P18847 181 aa13.15□□□□□ -0.3
NEK9-206ENST00000555537 ANKRD30AQ9BXX3 1397 aa13.15□□□□□ -0.3
NEK9-206ENST00000555537 PLEKHG1Q9ULL1 1385 aa13.15□□□□□ -0.3
NEK9-206ENST00000555537 ZFYVE9O95405 1425 aa13.14□□□□□ -0.31
NEK9-206ENST00000555537 HDGFP51858 240 aaKnown RBP13.14□□□□□ -0.31
NEK9-206ENST00000555537 CADPS2Q86UW7 1296 aa13.14□□□□□ -0.31
NEK9-206ENST00000555537 C19orf44Q9H6X5 657 aa13.14□□□□□ -0.31
NEK9-206ENST00000555537 MYO5BQ9ULV0 1848 aa13.13□□□□□ -0.31
NEK9-206ENST00000555537 FGD6Q6ZV73 1430 aa13.13□□□□□ -0.31
NEK9-206ENST00000555537 BRINP3Q76B58 766 aa13.12□□□□□ -0.31
NEK9-206ENST00000555537 APLP2Q06481 763 aa13.11□□□□□ -0.31
NEK9-206ENST00000555537 AFF2P51816 1311 aa13.11□□□□□ -0.31
NEK9-206ENST00000555537 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.1□□□□□ -0.31
NEK9-206ENST00000555537 AMOTL2Q9Y2J4 779 aa13.1□□□□□ -0.31
NEK9-206ENST00000555537 ADAMTS13Q76LX8 1427 aa13.1□□□□□ -0.31
NEK9-206ENST00000555537 NCOA3Q9Y6Q9 1424 aa13.1□□□□□ -0.31
NEK9-206ENST00000555537 GCC2Q8IWJ2 1684 aa13.09□□□□□ -0.31
NEK9-206ENST00000555537 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.09□□□□□ -0.31
NEK9-206ENST00000555537 DDX17Q92841 729 aaKnown RBP13.09□□□□□ -0.31
NEK9-206ENST00000555537 TMEM131LA2VDJ0 1609 aa13.09□□□□□ -0.31
NEK9-206ENST00000555537 FAM50AQ14320 339 aaKnown RBP13.08□□□□□ -0.32
NEK9-206ENST00000555537 QTRT2Q9H974 415 aaKnown RBP13.08□□□□□ -0.32
NEK9-206ENST00000555537 AHDC1Q5TGY3 1603 aaPredicted RBP13.08□□□□□ -0.32
NEK9-206ENST00000555537 SHPRHQ149N8 1683 aa13.08□□□□□ -0.32
NEK9-206ENST00000555537 PTPRUQ92729 1446 aa13.07□□□□□ -0.32
NEK9-206ENST00000555537 C8orf37Q96NL8 207 aa13.07□□□□□ -0.32
NEK9-206ENST00000555537 ANKRD50Q9ULJ7 1429 aa13.06□□□□□ -0.32
NEK9-206ENST00000555537 RPRD2Q5VT52 1461 aaKnown RBP13.06□□□□□ -0.32
NEK9-206ENST00000555537 DIP2AQ14689 1571 aa13.06□□□□□ -0.32
NEK9-206ENST00000555537 LRRC59Q96AG4 307 aaKnown RBP13.04□□□□□ -0.32
NEK9-206ENST00000555537 CDK12Q9NYV4 1490 aaPredicted RBP13.04□□□□□ -0.32
NEK9-206ENST00000555537 ADAMTS2O95450 1211 aa13.03□□□□□ -0.32
NEK9-206ENST00000555537 RBM6P78332 1123 aaKnown RBP13.03□□□□□ -0.32
NEK9-206ENST00000555537 PIK3R4Q99570 1358 aa13.03□□□□□ -0.32
NEK9-206ENST00000555537 RGS12O14924 1447 aa13.03□□□□□ -0.32
NEK9-206ENST00000555537 ADGRL2O95490 1459 aa13.03□□□□□ -0.32
NEK9-206ENST00000555537 SETD5Q9C0A6 1442 aa13.02□□□□□ -0.33
NEK9-206ENST00000555537 NGLY1Q96IV0 654 aa13.01□□□□□ -0.33
NEK9-206ENST00000555537 ASXL1Q8IXJ9 1541 aa13.01□□□□□ -0.33
NEK9-206ENST00000555537 MST1RQ04912 1400 aa13□□□□□ -0.33
NEK9-206ENST00000555537 E9PCH4 1651 aa12.99□□□□□ -0.33
NEK9-206ENST00000555537 TRPM2O94759 1503 aa12.99□□□□□ -0.33
NEK9-206ENST00000555537 PNPLA6Q8IY17 1366 aa12.99□□□□□ -0.33
NEK9-206ENST00000555537 METP08581 1390 aa12.98□□□□□ -0.33
NEK9-206ENST00000555537 ZNF326Q5BKZ1 582 aaKnown RBP12.97□□□□□ -0.33
NEK9-206ENST00000555537 UNC13BO14795 1591 aa12.97□□□□□ -0.33
NEK9-206ENST00000555537 DCCP43146 1447 aa12.96□□□□□ -0.33
NEK9-206ENST00000555537 NHSL1Q5SYE7 1610 aa12.96□□□□□ -0.33
NEK9-206ENST00000555537 USP21Q9UK80 565 aa12.96□□□□□ -0.33
NEK9-206ENST00000555537 NUP155O75694 1391 aa12.95□□□□□ -0.34
NEK9-206ENST00000555537 SRCAPQ6ZRS2 3230 aa12.95□□□□□ -0.34
NEK9-206ENST00000555537 ORAI2Q96SN7 254 aa12.95□□□□□ -0.34
NEK9-206ENST00000555537 ITGAEP38570 1179 aa12.94□□□□□ -0.34
NEK9-206ENST00000555537 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
NEK9-206ENST00000555537 NRXN3Q9Y4C0 1643 aa12.94□□□□□ -0.34
NEK9-206ENST00000555537 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
NEK9-206ENST00000555537 ATAD2Q6PL18 1390 aa12.93□□□□□ -0.34
NEK9-206ENST00000555537 TRPC5Q9UL62 973 aaPredicted RBP12.92□□□□□ -0.34
NEK9-206ENST00000555537 C1orf167Q5SNV9 1468 aa12.91□□□□□ -0.34
NEK9-206ENST00000555537 ADGRL3Q9HAR2 1447 aa12.91□□□□□ -0.34
NEK9-206ENST00000555537 FNBP4Q8N3X1 1017 aaPredicted RBP12.91□□□□□ -0.34
NEK9-206ENST00000555537 SETBP1Q9Y6X0 1596 aa12.9□□□□□ -0.34
NEK9-206ENST00000555537 IQGAP3Q86VI3 1631 aa12.9□□□□□ -0.34
NEK9-206ENST00000555537 SOS2Q07890 1332 aaPredicted RBP12.89□□□□□ -0.35
NEK9-206ENST00000555537 NALCNQ8IZF0 1738 aa12.89□□□□□ -0.35
NEK9-206ENST00000555537 ATRNO75882 1429 aa12.87□□□□□ -0.35
NEK9-206ENST00000555537 ROCK1Q13464 1354 aa12.86□□□□□ -0.35
NEK9-206ENST00000555537 ROBO2Q9HCK4 1378 aa12.86□□□□□ -0.35
NEK9-206ENST00000555537 XPCQ01831 940 aaPredicted RBP12.86□□□□□ -0.35
NEK9-206ENST00000555537 FOXD1Q16676 465 aa12.85□□□□□ -0.35
NEK9-206ENST00000555537 BCL9LQ86UU0 1499 aa12.85□□□□□ -0.35
NEK9-206ENST00000555537 ESCO1Q5FWF5 840 aa12.84□□□□□ -0.35
NEK9-206ENST00000555537 PPARGC1BQ86YN6 1023 aaKnown RBP12.84□□□□□ -0.35
NEK9-206ENST00000555537 CCDC125Q86Z20 511 aa12.84□□□□□ -0.35
NEK9-206ENST00000555537 GJD4Q96KN9 370 aaPredicted RBP12.84□□□□□ -0.35
NEK9-206ENST00000555537 PTCH1Q13635 1447 aa12.84□□□□□ -0.35
NEK9-206ENST00000555537 NEXMIFQ5QGS0 1516 aa12.83□□□□□ -0.35
NEK9-206ENST00000555537 SPHKAPQ2M3C7 1700 aa12.83□□□□□ -0.36
NEK9-206ENST00000555537 NUTM2FA1L443 756 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms