RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 ADGRB3O60242 1522 aa15.35■□□□□ 0.05
SCFD1-215ENST00000555259 BCANQ96GW7 911 aa15.34■□□□□ 0.05
SCFD1-215ENST00000555259 LMTK2Q8IWU2 1503 aa15.34■□□□□ 0.05
SCFD1-215ENST00000555259 NOS1P29475 1434 aa15.33■□□□□ 0.04
SCFD1-215ENST00000555259 ABCC5O15440 1437 aa15.32■□□□□ 0.04
SCFD1-215ENST00000555259 RXRBP28702 533 aa15.32■□□□□ 0.04
SCFD1-215ENST00000555259 KANK4Q5T7N3 995 aaPredicted RBP15.31■□□□□ 0.04
SCFD1-215ENST00000555259 CROCC2H7BZ55 1655 aa15.31■□□□□ 0.04
SCFD1-215ENST00000555259 CHD2O14647 1828 aaKnown RBP15.3■□□□□ 0.04
SCFD1-215ENST00000555259 AHDC1Q5TGY3 1603 aaPredicted RBP15.3■□□□□ 0.04
SCFD1-215ENST00000555259 SHPRHQ149N8 1683 aa15.3■□□□□ 0.04
SCFD1-215ENST00000555259 SLC52A1Q9NWF4 448 aa15.3■□□□□ 0.04
SCFD1-215ENST00000555259 PLEKHG1Q9ULL1 1385 aa15.3■□□□□ 0.04
SCFD1-215ENST00000555259 NCOA3Q9Y6Q9 1424 aa15.3■□□□□ 0.04
SCFD1-215ENST00000555259 CDK12Q9NYV4 1490 aaPredicted RBP15.3■□□□□ 0.04
SCFD1-215ENST00000555259 ZFYVE9O95405 1425 aa15.29■□□□□ 0.04
SCFD1-215ENST00000555259 C14orf37Q86TY3 774 aa15.28■□□□□ 0.04
SCFD1-215ENST00000555259 VPS8Q8N3P4 1428 aa15.28■□□□□ 0.04
SCFD1-215ENST00000555259 CADPS2Q86UW7 1296 aa15.27■□□□□ 0.03
SCFD1-215ENST00000555259 DAPK1P53355 1430 aa15.26■□□□□ 0.03
SCFD1-215ENST00000555259 PPP1R15AO75807 674 aaPredicted RBP15.26■□□□□ 0.03
SCFD1-215ENST00000555259 C19orf44Q9H6X5 657 aa15.25■□□□□ 0.03
SCFD1-215ENST00000555259 TBX22Q9Y458 520 aa15.25■□□□□ 0.03
SCFD1-215ENST00000555259 RIMS2Q9UQ26 1411 aa15.25■□□□□ 0.03
SCFD1-215ENST00000555259 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.25■□□□□ 0.03
SCFD1-215ENST00000555259 NUTM2BA6NNL0 878 aaPredicted RBP15.24■□□□□ 0.03
SCFD1-215ENST00000555259 NUTM2EB1AL46 878 aaPredicted RBP15.24■□□□□ 0.03
SCFD1-215ENST00000555259 ATF3P18847 181 aa15.24■□□□□ 0.03
SCFD1-215ENST00000555259 NUTM2AQ8IVF1 878 aaPredicted RBP15.24■□□□□ 0.03
SCFD1-215ENST00000555259 DIP2AQ14689 1571 aa15.24■□□□□ 0.03
SCFD1-215ENST00000555259 AFF2P51816 1311 aa15.24■□□□□ 0.03
SCFD1-215ENST00000555259 HDGFP51858 240 aaKnown RBP15.24■□□□□ 0.03
SCFD1-215ENST00000555259 PTPN23Q9H3S7 1636 aa15.23■□□□□ 0.03
SCFD1-215ENST00000555259 ANKRD30AQ9BXX3 1397 aa15.23■□□□□ 0.03
SCFD1-215ENST00000555259 BRINP3Q76B58 766 aa15.23■□□□□ 0.03
SCFD1-215ENST00000555259 RPRD2Q5VT52 1461 aaKnown RBP15.23■□□□□ 0.03
SCFD1-215ENST00000555259 MYO5BQ9ULV0 1848 aa15.22■□□□□ 0.03
SCFD1-215ENST00000555259 CHIC2Q9UKJ5 165 aa15.21■□□□□ 0.03
SCFD1-215ENST00000555259 RGS12O14924 1447 aa15.21■□□□□ 0.03
SCFD1-215ENST00000555259 ADAMTS13Q76LX8 1427 aa15.21■□□□□ 0.03
SCFD1-215ENST00000555259 GCC2Q8IWJ2 1684 aa15.21■□□□□ 0.03
SCFD1-215ENST00000555259 TMEM131LA2VDJ0 1609 aa15.21■□□□□ 0.02
SCFD1-215ENST00000555259 PIK3R4Q99570 1358 aa15.19■□□□□ 0.02
SCFD1-215ENST00000555259 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.19■□□□□ 0.02
SCFD1-215ENST00000555259 SETD5Q9C0A6 1442 aa15.18■□□□□ 0.02
SCFD1-215ENST00000555259 ASXL1Q8IXJ9 1541 aa15.17■□□□□ 0.02
SCFD1-215ENST00000555259 RBM6P78332 1123 aaKnown RBP15.17■□□□□ 0.02
SCFD1-215ENST00000555259 NUTM2DQ5VT03 806 aaPredicted RBP15.16■□□□□ 0.02
SCFD1-215ENST00000555259 C8orf37Q96NL8 207 aa15.16■□□□□ 0.02
SCFD1-215ENST00000555259 QTRT2Q9H974 415 aaKnown RBP15.16■□□□□ 0.02
SCFD1-215ENST00000555259 DCCP43146 1447 aa15.16■□□□□ 0.02
SCFD1-215ENST00000555259 AMOTL2Q9Y2J4 779 aa15.15■□□□□ 0.02
SCFD1-215ENST00000555259 EP400Q96L91 3159 aa15.15■□□□□ 0.02
SCFD1-215ENST00000555259 CHGAP10645 457 aaKnown RBP15.15■□□□□ 0.02
SCFD1-215ENST00000555259 FOXD1Q16676 465 aa15.15■□□□□ 0.02
SCFD1-215ENST00000555259 PTPRUQ92729 1446 aa15.15■□□□□ 0.02
SCFD1-215ENST00000555259 LRRC59Q96AG4 307 aaKnown RBP15.14■□□□□ 0.01
SCFD1-215ENST00000555259 NHSL1Q5SYE7 1610 aa15.14■□□□□ 0.01
SCFD1-215ENST00000555259 ADGRL2O95490 1459 aa15.14■□□□□ 0.01
SCFD1-215ENST00000555259 TRPM2O94759 1503 aa15.13■□□□□ 0.01
SCFD1-215ENST00000555259 MST1RQ04912 1400 aa15.13■□□□□ 0.01
SCFD1-215ENST00000555259 ANKRD50Q9ULJ7 1429 aa15.12■□□□□ 0.01
SCFD1-215ENST00000555259 PNPLA6Q8IY17 1366 aa15.12■□□□□ 0.01
SCFD1-215ENST00000555259 ATAD2Q6PL18 1390 aa15.11■□□□□ 0.01
SCFD1-215ENST00000555259 NGLY1Q96IV0 654 aa15.11■□□□□ 0.01
SCFD1-215ENST00000555259 DDX17Q92841 729 aaKnown RBP15.09■□□□□ 0.01
SCFD1-215ENST00000555259 UNC13BO14795 1591 aa15.09■□□□□ 0.01
SCFD1-215ENST00000555259 XRN1Q8IZH2 1706 aaKnown RBP15.08■□□□□ 0.01
SCFD1-215ENST00000555259 ZRANB1Q9UGI0 708 aa15.08■□□□□ 0
SCFD1-215ENST00000555259 ADAMTS2O95450 1211 aa15.07■□□□□ 0
SCFD1-215ENST00000555259 E9PCH4 1651 aa15.06■□□□□ 0
SCFD1-215ENST00000555259 SETBP1Q9Y6X0 1596 aa15.05■□□□□ 0
SCFD1-215ENST00000555259 LOC105371045A0A1W2PR82 267 aa15.05■□□□□ -0
SCFD1-215ENST00000555259 APLP2Q06481 763 aa15.05■□□□□ -0
SCFD1-215ENST00000555259 NRXN3Q9Y4C0 1643 aa15.05■□□□□ -0
SCFD1-215ENST00000555259 ADGRL3Q9HAR2 1447 aa15.04■□□□□ -0
SCFD1-215ENST00000555259 USP21Q9UK80 565 aa15.04■□□□□ -0
SCFD1-215ENST00000555259 TRPC5Q9UL62 973 aaPredicted RBP15.03■□□□□ -0
SCFD1-215ENST00000555259 METP08581 1390 aa15.03■□□□□ -0
SCFD1-215ENST00000555259 FNBP4Q8N3X1 1017 aaPredicted RBP15.02□□□□□ -0.01
SCFD1-215ENST00000555259 FAM50AQ14320 339 aaKnown RBP15.01□□□□□ -0.01
SCFD1-215ENST00000555259 NALCNQ8IZF0 1738 aa15.01□□□□□ -0.01
SCFD1-215ENST00000555259 C1orf167Q5SNV9 1468 aa15□□□□□ -0.01
SCFD1-215ENST00000555259 ATRNO75882 1429 aa15□□□□□ -0.01
SCFD1-215ENST00000555259 LAMC1P11047 1609 aa15□□□□□ -0.01
SCFD1-215ENST00000555259 PTCH1Q13635 1447 aa14.99□□□□□ -0.01
SCFD1-215ENST00000555259 CCDC125Q86Z20 511 aa14.99□□□□□ -0.01
SCFD1-215ENST00000555259 IQGAP3Q86VI3 1631 aa14.99□□□□□ -0.01
SCFD1-215ENST00000555259 SOS2Q07890 1332 aaPredicted RBP14.99□□□□□ -0.01
SCFD1-215ENST00000555259 ORAI2Q96SN7 254 aa14.96□□□□□ -0.01
SCFD1-215ENST00000555259 ZNF326Q5BKZ1 582 aaKnown RBP14.95□□□□□ -0.02
SCFD1-215ENST00000555259 NUP155O75694 1391 aa14.95□□□□□ -0.02
SCFD1-215ENST00000555259 BCL9LQ86UU0 1499 aa14.94□□□□□ -0.02
SCFD1-215ENST00000555259 COL22A1Q8NFW1 1626 aaPredicted RBP14.94□□□□□ -0.02
SCFD1-215ENST00000555259 MYOM2P54296 1465 aa14.93□□□□□ -0.02
SCFD1-215ENST00000555259 ROCK1Q13464 1354 aa14.92□□□□□ -0.02
SCFD1-215ENST00000555259 GJD4Q96KN9 370 aaPredicted RBP14.91□□□□□ -0.02
SCFD1-215ENST00000555259 BLMP54132 1417 aaPredicted RBP14.91□□□□□ -0.02
SCFD1-215ENST00000555259 NEXMIFQ5QGS0 1516 aa14.9□□□□□ -0.02
SCFD1-215ENST00000555259 ROBO2Q9HCK4 1378 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms