RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 FANCAO15360 1455 aa15.83■□□□□ 0.12
ARHGEF40-206ENST00000555232 KDM6BO15054 1643 aa15.83■□□□□ 0.12
ARHGEF40-206ENST00000555232 PPP2R1AP30153 589 aa15.83■□□□□ 0.12
ARHGEF40-206ENST00000555232 ERBINQ96RT1 1412 aa15.83■□□□□ 0.12
ARHGEF40-206ENST00000555232 TERF2IPQ9NYB0 399 aa15.82■□□□□ 0.12
ARHGEF40-206ENST00000555232 CRBNQ96SW2 442 aa15.82■□□□□ 0.12
ARHGEF40-206ENST00000555232 EVC2Q86UK5 1308 aa15.82■□□□□ 0.12
ARHGEF40-206ENST00000555232 CABP1Q9NZU7 370 aa15.81■□□□□ 0.12
ARHGEF40-206ENST00000555232 ASXL2Q76L83 1435 aa15.8■□□□□ 0.12
ARHGEF40-206ENST00000555232 COG6Q9Y2V7 657 aa15.8■□□□□ 0.12
ARHGEF40-206ENST00000555232 DISP3Q9P2K9 1392 aa15.8■□□□□ 0.12
ARHGEF40-206ENST00000555232 ZNF428Q96B54 188 aa15.79■□□□□ 0.12
ARHGEF40-206ENST00000555232 EID1Q9Y6B2 187 aa15.79■□□□□ 0.12
ARHGEF40-206ENST00000555232 CFAP43Q8NDM7 1665 aa15.79■□□□□ 0.12
ARHGEF40-206ENST00000555232 ERCC6L2Q5T890 1561 aa15.79■□□□□ 0.12
ARHGEF40-206ENST00000555232 SPRYD3Q8NCJ5 442 aa15.78■□□□□ 0.12
ARHGEF40-206ENST00000555232 CFAP65Q6ZU64 1925 aaKnown RBP15.78■□□□□ 0.12
ARHGEF40-206ENST00000555232 HDGFP51858 240 aaKnown RBP15.78■□□□□ 0.12
ARHGEF40-206ENST00000555232 NECTIN2Q92692 538 aa15.78■□□□□ 0.12
ARHGEF40-206ENST00000555232 SAMD9Q5K651 1589 aa15.77■□□□□ 0.12
ARHGEF40-206ENST00000555232 NOP58Q9Y2X3 529 aaKnown RBP15.77■□□□□ 0.12
ARHGEF40-206ENST00000555232 CGNL1Q0VF96 1302 aa15.77■□□□□ 0.12
ARHGEF40-206ENST00000555232 RRP1P56182 461 aaKnown RBP15.76■□□□□ 0.11
ARHGEF40-206ENST00000555232 SMC4Q9NTJ3 1288 aa15.75■□□□□ 0.11
ARHGEF40-206ENST00000555232 ITPRIPQ8IWB1 547 aa15.75■□□□□ 0.11
ARHGEF40-206ENST00000555232 SLC4A3P48751 1232 aa15.74■□□□□ 0.11
ARHGEF40-206ENST00000555232 PLCH2O75038 1416 aa15.74■□□□□ 0.11
ARHGEF40-206ENST00000555232 BCAR3O75815 825 aa15.74■□□□□ 0.11
ARHGEF40-206ENST00000555232 XPCQ01831 940 aaPredicted RBP15.74■□□□□ 0.11
ARHGEF40-206ENST00000555232 PZPP20742 1482 aa15.73■□□□□ 0.11
ARHGEF40-206ENST00000555232 PANK1Q8TE04 598 aa15.73■□□□□ 0.11
ARHGEF40-206ENST00000555232 TSR2Q969E8 191 aaKnown RBP15.73■□□□□ 0.11
ARHGEF40-206ENST00000555232 CDK19Q9BWU1 502 aa15.73■□□□□ 0.11
ARHGEF40-206ENST00000555232 RRS1Q15050 365 aaKnown RBP15.73■□□□□ 0.11
ARHGEF40-206ENST00000555232 TCP11L2Q8N4U5 519 aa15.73■□□□□ 0.11
ARHGEF40-206ENST00000555232 HSP90AA1P07900 732 aaKnown RBP15.72■□□□□ 0.11
ARHGEF40-206ENST00000555232 AMPHP49418 695 aa15.72■□□□□ 0.11
ARHGEF40-206ENST00000555232 TPRNQ4KMQ1 711 aa15.72■□□□□ 0.11
ARHGEF40-206ENST00000555232 NCKAP5LQ9HCH0 1330 aa15.71■□□□□ 0.11
ARHGEF40-206ENST00000555232 THUMPD2Q9BTF0 503 aaKnown RBP15.7■□□□□ 0.1
ARHGEF40-206ENST00000555232 TCOF1Q13428 1488 aaKnown RBP15.7■□□□□ 0.1
ARHGEF40-206ENST00000555232 RIPK4P57078 832 aa15.7■□□□□ 0.1
ARHGEF40-206ENST00000555232 NOS1P29475 1434 aa15.7■□□□□ 0.1
ARHGEF40-206ENST00000555232 C20orf194Q5TEA3 1177 aa15.69■□□□□ 0.1
ARHGEF40-206ENST00000555232 SLC4A10Q6U841 1118 aa15.69■□□□□ 0.1
ARHGEF40-206ENST00000555232 COG3Q96JB2 828 aa15.69■□□□□ 0.1
ARHGEF40-206ENST00000555232 UPF2Q9HAU5 1272 aaKnown RBP15.68■□□□□ 0.1
ARHGEF40-206ENST00000555232 TESK2Q96S53 571 aa15.68■□□□□ 0.1
ARHGEF40-206ENST00000555232 ZNF330Q9Y3S2 320 aaPredicted RBP15.66■□□□□ 0.1
ARHGEF40-206ENST00000555232 DHX29Q7Z478 1369 aaKnown RBP15.66■□□□□ 0.1
ARHGEF40-206ENST00000555232 DIAPH1O60610 1272 aaKnown RBP15.66■□□□□ 0.1
ARHGEF40-206ENST00000555232 RTF1Q92541 710 aaKnown RBP15.65■□□□□ 0.1
ARHGEF40-206ENST00000555232 ERICH6BQ5W0A0 696 aa15.65■□□□□ 0.1
ARHGEF40-206ENST00000555232 MYH16Q9H6N6 1097 aa15.65■□□□□ 0.1
ARHGEF40-206ENST00000555232 CSB-PGBD3P0DP91 1061 aa15.64■□□□□ 0.09
ARHGEF40-206ENST00000555232 FAM135AQ9P2D6 1515 aa15.64■□□□□ 0.09
ARHGEF40-206ENST00000555232 BRD4O60885 1362 aaPredicted RBP15.64■□□□□ 0.09
ARHGEF40-206ENST00000555232 SLC52A1Q9NWF4 448 aa15.63■□□□□ 0.09
ARHGEF40-206ENST00000555232 ZRANB1Q9UGI0 708 aa15.63■□□□□ 0.09
ARHGEF40-206ENST00000555232 PRKAR2BP31323 418 aa15.62■□□□□ 0.09
ARHGEF40-206ENST00000555232 NLRP6P59044 892 aa15.62■□□□□ 0.09
ARHGEF40-206ENST00000555232 WDR7Q9Y4E6 1490 aa15.62■□□□□ 0.09
ARHGEF40-206ENST00000555232 PDE3BQ13370 1112 aa15.62■□□□□ 0.09
ARHGEF40-206ENST00000555232 DCTN1Q14203 1278 aa15.62■□□□□ 0.09
ARHGEF40-206ENST00000555232 NME9Q86XW9 330 aa15.62■□□□□ 0.09
ARHGEF40-206ENST00000555232 NSD3Q9BZ95 1437 aa15.61■□□□□ 0.09
ARHGEF40-206ENST00000555232 KDM5BQ9UGL1 1544 aa15.61■□□□□ 0.09
ARHGEF40-206ENST00000555232 TAOK2Q9UL54 1235 aa15.61■□□□□ 0.09
ARHGEF40-206ENST00000555232 CARD14Q9BXL6 1004 aa15.6■□□□□ 0.09
ARHGEF40-206ENST00000555232 EMILIN1Q9Y6C2 1016 aa15.59■□□□□ 0.09
ARHGEF40-206ENST00000555232 RUNDC1Q96C34 613 aa15.59■□□□□ 0.09
ARHGEF40-206ENST00000555232 E9PSI1 815 aa15.58■□□□□ 0.09
ARHGEF40-206ENST00000555232 NGEFQ8N5V2 710 aa15.58■□□□□ 0.09
ARHGEF40-206ENST00000555232 SLKQ9H2G2 1235 aaPredicted RBP15.58■□□□□ 0.09
ARHGEF40-206ENST00000555232 EXOSC9Q06265 439 aaKnown RBP15.58■□□□□ 0.08
ARHGEF40-206ENST00000555232 MIS18AQ9NYP9 233 aa15.58■□□□□ 0.08
ARHGEF40-206ENST00000555232 MBD5Q9P267 1494 aa15.58■□□□□ 0.08
ARHGEF40-206ENST00000555232 ABCC2Q92887 1545 aa15.58■□□□□ 0.08
ARHGEF40-206ENST00000555232 DNMT1P26358 1616 aaKnown RBP15.58■□□□□ 0.08
ARHGEF40-206ENST00000555232 UBE2Q2Q8WVN8 375 aa15.58■□□□□ 0.08
ARHGEF40-206ENST00000555232 PSME1Q06323 249 aa15.57■□□□□ 0.08
ARHGEF40-206ENST00000555232 PRAG1Q86YV5 1406 aa15.57■□□□□ 0.08
ARHGEF40-206ENST00000555232 DENND4BO75064 1496 aaPredicted RBP15.57■□□□□ 0.08
ARHGEF40-206ENST00000555232 EIF2S2P20042 333 aaKnown RBP15.57■□□□□ 0.08
ARHGEF40-206ENST00000555232 ESCO1Q5FWF5 840 aa15.57■□□□□ 0.08
ARHGEF40-206ENST00000555232 C1orf115Q9H7X2 142 aa15.56■□□□□ 0.08
ARHGEF40-206ENST00000555232 PER1O15534 1290 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF40-206ENST00000555232 USP35Q9P2H5 1018 aa15.55■□□□□ 0.08
ARHGEF40-206ENST00000555232 ABCC10Q5T3U5 1492 aa15.55■□□□□ 0.08
ARHGEF40-206ENST00000555232 TEX14Q8IWB6 1497 aa15.55■□□□□ 0.08
ARHGEF40-206ENST00000555232 AMER1Q5JTC6 1135 aaPredicted RBP15.55■□□□□ 0.08
ARHGEF40-206ENST00000555232 SULT6B1Q6IMI4 303 aa15.55■□□□□ 0.08
ARHGEF40-206ENST00000555232 ABTB2Q8N961 1025 aa15.55■□□□□ 0.08
ARHGEF40-206ENST00000555232 C14orf93Q9H972 538 aaKnown RBP15.55■□□□□ 0.08
ARHGEF40-206ENST00000555232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.55■□□□□ 0.08
ARHGEF40-206ENST00000555232 PDE4AP27815 886 aa15.55■□□□□ 0.08
ARHGEF40-206ENST00000555232 NUDT16Q96DE0 195 aaKnown RBP15.55■□□□□ 0.08
ARHGEF40-206ENST00000555232 A2MP01023 1474 aa15.53■□□□□ 0.08
ARHGEF40-206ENST00000555232 MFAP1P55081 439 aaKnown RBP15.53■□□□□ 0.08
ARHGEF40-206ENST00000555232 PNNQ9H307 717 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms