RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SLC24A1O60721 1099 aa3.83□□□□□ -1.8
PRPF39-208ENST00000554785 KRTAP4-12Q9BQ66 201 aa3.82□□□□□ -1.8
PRPF39-208ENST00000554785 WBP1LQ9NX94 342 aa3.82□□□□□ -1.8
PRPF39-208ENST00000554785 GGCXP38435 758 aa3.82□□□□□ -1.8
PRPF39-208ENST00000554785 HDGFP51858 240 aaKnown RBP3.82□□□□□ -1.8
PRPF39-208ENST00000554785 PPP4CP60510 307 aa3.82□□□□□ -1.8
PRPF39-208ENST00000554785 HPS5Q9UPZ3 1129 aa3.82□□□□□ -1.8
PRPF39-208ENST00000554785 PADI6Q6TGC4 694 aa3.81□□□□□ -1.8
PRPF39-208ENST00000554785 TTC13Q8NBP0 860 aa3.81□□□□□ -1.8
PRPF39-208ENST00000554785 TATDN2Q93075 761 aa3.81□□□□□ -1.8
PRPF39-208ENST00000554785 IL21Q9HBE4 155 aa3.81□□□□□ -1.8
PRPF39-208ENST00000554785 PDZRN3Q9UPQ7 1066 aa3.81□□□□□ -1.8
PRPF39-208ENST00000554785 PTGDRQ13258 359 aa3.8□□□□□ -1.8
PRPF39-208ENST00000554785 FAM161AQ3B820 660 aa3.8□□□□□ -1.8
PRPF39-208ENST00000554785 NUDT18Q6ZVK8 323 aa3.8□□□□□ -1.8
PRPF39-208ENST00000554785 P3H3Q8IVL6 736 aa3.8□□□□□ -1.8
PRPF39-208ENST00000554785 SLC4A3P48751 1232 aa3.8□□□□□ -1.8
PRPF39-208ENST00000554785 NFX1Q12986 1120 aaKnown RBP3.8□□□□□ -1.8
PRPF39-208ENST00000554785 RBM26Q5T8P6 1007 aaKnown RBP3.8□□□□□ -1.8
PRPF39-208ENST00000554785 SAMD7Q7Z3H4 446 aa3.8□□□□□ -1.8
PRPF39-208ENST00000554785 TMUB1Q9BVT8 246 aa3.8□□□□□ -1.8
PRPF39-208ENST00000554785 PNMA3Q9UL41 463 aa3.8□□□□□ -1.8
PRPF39-208ENST00000554785 TESPA1A2RU30 521 aaPredicted RBP3.79□□□□□ -1.8
PRPF39-208ENST00000554785 NUTM2FA1L443 756 aa3.79□□□□□ -1.8
PRPF39-208ENST00000554785 PRR14Q9BWN1 585 aa3.79□□□□□ -1.8
PRPF39-208ENST00000554785 FECHP22830 423 aa3.78□□□□□ -1.8
PRPF39-208ENST00000554785 EYA1Q99502 592 aa3.78□□□□□ -1.8
PRPF39-208ENST00000554785 PRKD2Q9BZL6 878 aa3.78□□□□□ -1.8
PRPF39-208ENST00000554785 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.78□□□□□ -1.8
PRPF39-208ENST00000554785 RBM27Q9P2N5 1060 aaKnown RBP3.78□□□□□ -1.8
PRPF39-208ENST00000554785 NBPF26B4DH59 902 aa3.77□□□□□ -1.81
PRPF39-208ENST00000554785 TJAP1Q5JTD0 557 aa3.77□□□□□ -1.81
PRPF39-208ENST00000554785 MYT1Q01538 1121 aa3.77□□□□□ -1.81
PRPF39-208ENST00000554785 GPR37O15354 613 aa3.76□□□□□ -1.81
PRPF39-208ENST00000554785 VSIG10Q8N0Z9 540 aa3.76□□□□□ -1.81
PRPF39-208ENST00000554785 SWT1Q5T5J6 900 aaKnown RBP3.76□□□□□ -1.81
PRPF39-208ENST00000554785 ADGRG1Q9Y653 693 aa3.76□□□□□ -1.81
PRPF39-208ENST00000554785 MTRQ99707 1265 aa3.75□□□□□ -1.81
PRPF39-208ENST00000554785 RNF40O75150 1001 aa3.74□□□□□ -1.81
PRPF39-208ENST00000554785 DGAT1O75907 488 aa3.74□□□□□ -1.81
PRPF39-208ENST00000554785 LORP23490 312 aaPredicted RBP3.74□□□□□ -1.81
PRPF39-208ENST00000554785 APLP1P51693 650 aa3.74□□□□□ -1.81
PRPF39-208ENST00000554785 PPP1R18Q6NYC8 613 aa3.74□□□□□ -1.81
PRPF39-208ENST00000554785 SLF2Q8IX21 1173 aa3.74□□□□□ -1.81
PRPF39-208ENST00000554785 FCHSD2O94868 740 aa3.74□□□□□ -1.81
PRPF39-208ENST00000554785 NLRP7Q8WX94 980 aa3.74□□□□□ -1.81
PRPF39-208ENST00000554785 RCCD1A6NED2 376 aa3.73□□□□□ -1.81
PRPF39-208ENST00000554785 LCE1DQ5T752 114 aa3.73□□□□□ -1.81
PRPF39-208ENST00000554785 PHOX2BQ99453 314 aa3.73□□□□□ -1.81
PRPF39-208ENST00000554785 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
PRPF39-208ENST00000554785 KCNMA1Q12791 1236 aa3.73□□□□□ -1.81
PRPF39-208ENST00000554785 HIC1Q14526 733 aa3.73□□□□□ -1.81
PRPF39-208ENST00000554785 ZSCAN1Q8NBB4 408 aa3.73□□□□□ -1.81
PRPF39-208ENST00000554785 ZNF516Q92618 1163 aa3.73□□□□□ -1.81
PRPF39-208ENST00000554785 TMEM134Q9H6X4 195 aa3.73□□□□□ -1.81
PRPF39-208ENST00000554785 PXYLP1Q8TE99 480 aa3.72□□□□□ -1.81
PRPF39-208ENST00000554785 GNPATO15228 680 aa3.71□□□□□ -1.81
PRPF39-208ENST00000554785 PRR20EP86478 221 aa3.71□□□□□ -1.81
PRPF39-208ENST00000554785 PRR20CP86479 221 aa3.71□□□□□ -1.81
PRPF39-208ENST00000554785 PRR20DP86480 221 aa3.71□□□□□ -1.81
PRPF39-208ENST00000554785 PRR20BP86481 221 aa3.71□□□□□ -1.81
PRPF39-208ENST00000554785 PRR20AP86496 221 aa3.71□□□□□ -1.81
PRPF39-208ENST00000554785 SMYD5Q6GMV2 418 aa3.71□□□□□ -1.81
PRPF39-208ENST00000554785 LMOD2Q6P5Q4 547 aa3.71□□□□□ -1.81
PRPF39-208ENST00000554785 METTL3Q86U44 580 aaKnown RBP3.71□□□□□ -1.81
PRPF39-208ENST00000554785 RBM46Q8TBY0 533 aaKnown RBP3.71□□□□□ -1.81
PRPF39-208ENST00000554785 SLC10A3P09131 477 aa3.71□□□□□ -1.82
PRPF39-208ENST00000554785 DNAJB2P25686 324 aa3.71□□□□□ -1.82
PRPF39-208ENST00000554785 PKDCCQ504Y2 493 aa3.71□□□□□ -1.82
PRPF39-208ENST00000554785 NKX2-3Q8TAU0 364 aa3.71□□□□□ -1.82
PRPF39-208ENST00000554785 COPS2P61201 443 aa3.7□□□□□ -1.82
PRPF39-208ENST00000554785 GPIHBP1Q8IV16 184 aa3.7□□□□□ -1.82
PRPF39-208ENST00000554785 ZPR1O75312 459 aa3.69□□□□□ -1.82
PRPF39-208ENST00000554785 ZNF598Q86UK7 904 aaKnown RBP3.69□□□□□ -1.82
PRPF39-208ENST00000554785 TMEM151AQ8N4L1 468 aa3.69□□□□□ -1.82
PRPF39-208ENST00000554785 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
PRPF39-208ENST00000554785 OATP04181 439 aa3.68□□□□□ -1.82
PRPF39-208ENST00000554785 SLC19A1P41440 591 aa3.68□□□□□ -1.82
PRPF39-208ENST00000554785 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.68□□□□□ -1.82
PRPF39-208ENST00000554785 ANKLE1Q8NAG6 615 aa3.68□□□□□ -1.82
PRPF39-208ENST00000554785 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.68□□□□□ -1.82
PRPF39-208ENST00000554785 BLOC1S3Q6QNY0 202 aa3.68□□□□□ -1.82
PRPF39-208ENST00000554785 CFHP08603 1231 aa3.67□□□□□ -1.82
PRPF39-208ENST00000554785 KMT5BQ4FZB7 885 aa3.67□□□□□ -1.82
PRPF39-208ENST00000554785 TLL1O43897 1013 aa3.67□□□□□ -1.82
PRPF39-208ENST00000554785 SPRYD7Q5W111 196 aa3.67□□□□□ -1.82
PRPF39-208ENST00000554785 PCDHB3Q9Y5E6 796 aa3.67□□□□□ -1.82
PRPF39-208ENST00000554785 IGHA1P01876 353 aa3.66□□□□□ -1.82
PRPF39-208ENST00000554785 PUS10Q3MIT2 529 aaKnown RBP3.66□□□□□ -1.82
PRPF39-208ENST00000554785 LCE2CQ5TA81 110 aa3.66□□□□□ -1.82
PRPF39-208ENST00000554785 DDX11L8A8MPP1 907 aa3.65□□□□□ -1.82
PRPF39-208ENST00000554785 IRF6O14896 467 aa3.65□□□□□ -1.82
PRPF39-208ENST00000554785 ACTN4O43707 911 aaKnown RBP3.65□□□□□ -1.82
PRPF39-208ENST00000554785 RSPH4AQ5TD94 716 aa3.65□□□□□ -1.82
PRPF39-208ENST00000554785 DAXXQ9UER7 740 aaPredicted RBP3.65□□□□□ -1.82
PRPF39-208ENST00000554785 MAP2K5Q13163 448 aa3.65□□□□□ -1.83
PRPF39-208ENST00000554785 EMID1Q96A84 441 aaPredicted RBP3.65□□□□□ -1.83
PRPF39-208ENST00000554785 RNF223E7ERA6 249 aa3.64□□□□□ -1.83
PRPF39-208ENST00000554785 NR1I2O75469 434 aa3.64□□□□□ -1.83
PRPF39-208ENST00000554785 FUT2Q10981 343 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms