RNA–Protein interactions for RNA: ENST00000553802.5

LGMN-204, Transcript of legumain, humanhuman

TSL 3

Gene LGMN, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-204ENST00000553802 HDGFP51858 240 aaKnown RBP23.9■■□□□ 1.42
LGMN-204ENST00000553802 TRIM52Q96A61 297 aa23.89■■□□□ 1.41
LGMN-204ENST00000553802 HFM1A2PYH4 1435 aa23.89■■□□□ 1.41
LGMN-204ENST00000553802 XIRP1Q702N8 1843 aaKnown RBP23.88■■□□□ 1.41
LGMN-204ENST00000553802 TMEM131LA2VDJ0 1609 aa23.88■■□□□ 1.41
LGMN-204ENST00000553802 SPHKAPQ2M3C7 1700 aa23.87■■□□□ 1.41
LGMN-204ENST00000553802 ILDR2Q71H61 639 aa23.87■■□□□ 1.41
LGMN-204ENST00000553802 HSPA1LP34931 641 aa23.85■■□□□ 1.41
LGMN-204ENST00000553802 RIMS2Q9UQ26 1411 aa23.84■■□□□ 1.41
LGMN-204ENST00000553802 SENP3Q9H4L4 574 aaPredicted RBP23.84■■□□□ 1.41
LGMN-204ENST00000553802 SLC26A8Q96RN1 970 aa23.83■■□□□ 1.41
LGMN-204ENST00000553802 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.82■■□□□ 1.4
LGMN-204ENST00000553802 ZFYVE9O95405 1425 aa23.8■■□□□ 1.4
LGMN-204ENST00000553802 PLEKHG1Q9ULL1 1385 aa23.78■■□□□ 1.4
LGMN-204ENST00000553802 ZNF326Q5BKZ1 582 aaKnown RBP23.77■■□□□ 1.4
LGMN-204ENST00000553802 NUTM2DQ5VT03 806 aaPredicted RBP23.77■■□□□ 1.4
LGMN-204ENST00000553802 SLC4A1APQ9BWU0 796 aaKnown RBP23.77■■□□□ 1.4
LGMN-204ENST00000553802 TRPM2O94759 1503 aa23.74■■□□□ 1.39
LGMN-204ENST00000553802 KCNA6P17658 529 aa23.74■■□□□ 1.39
LGMN-204ENST00000553802 MED1Q15648 1581 aaPredicted RBP23.74■■□□□ 1.39
LGMN-204ENST00000553802 KIF1BO60333 1816 aa23.73■■□□□ 1.39
LGMN-204ENST00000553802 CLTCL1P53675 1640 aa23.72■■□□□ 1.39
LGMN-204ENST00000553802 NWD1Q149M9 1564 aa23.71■■□□□ 1.39
LGMN-204ENST00000553802 PROSER2Q86WR7 435 aaPredicted RBP23.69■■□□□ 1.38
LGMN-204ENST00000553802 CHD2O14647 1828 aaKnown RBP23.68■■□□□ 1.38
LGMN-204ENST00000553802 TMEM94Q12767 1356 aa23.68■■□□□ 1.38
LGMN-204ENST00000553802 NKTRP30414 1462 aaKnown RBP23.68■■□□□ 1.38
LGMN-204ENST00000553802 DIP2AQ14689 1571 aa23.67■■□□□ 1.38
LGMN-204ENST00000553802 SOCS7O14512 581 aa23.67■■□□□ 1.38
LGMN-204ENST00000553802 TBX22Q9Y458 520 aa23.66■■□□□ 1.38
LGMN-204ENST00000553802 ACIN1Q9UKV3 1341 aaKnown RBP23.64■■□□□ 1.38
LGMN-204ENST00000553802 RBM33Q96EV2 1170 aaKnown RBP23.64■■□□□ 1.37
LGMN-204ENST00000553802 ADAMTS13Q76LX8 1427 aa23.62■■□□□ 1.37
LGMN-204ENST00000553802 SETD5Q9C0A6 1442 aa23.62■■□□□ 1.37
LGMN-204ENST00000553802 FOXD1Q16676 465 aa23.61■■□□□ 1.37
LGMN-204ENST00000553802 C14orf37Q86TY3 774 aa23.6■■□□□ 1.37
LGMN-204ENST00000553802 MPHOSPH9Q99550 1183 aa23.6■■□□□ 1.37
LGMN-204ENST00000553802 MSH6P52701 1360 aa23.6■■□□□ 1.37
LGMN-204ENST00000553802 PIK3R4Q99570 1358 aa23.59■■□□□ 1.37
LGMN-204ENST00000553802 NEXMIFQ5QGS0 1516 aa23.59■■□□□ 1.37
LGMN-204ENST00000553802 ROBO1Q9Y6N7 1651 aa23.58■■□□□ 1.37
LGMN-204ENST00000553802 FAM135BQ49AJ0 1406 aa23.58■■□□□ 1.36
LGMN-204ENST00000553802 CCDC144AA2RUR9 1427 aa23.57■■□□□ 1.36
LGMN-204ENST00000553802 SETBP1Q9Y6X0 1596 aa23.57■■□□□ 1.36
LGMN-204ENST00000553802 NRXN3Q9Y4C0 1643 aa23.55■■□□□ 1.36
LGMN-204ENST00000553802 RAB3GAP2Q9H2M9 1393 aa23.53■■□□□ 1.36
LGMN-204ENST00000553802 VGFO15240 615 aaPredicted RBP23.53■■□□□ 1.36
LGMN-204ENST00000553802 AMOTL2Q9Y2J4 779 aa23.53■■□□□ 1.36
LGMN-204ENST00000553802 RPGRIP1LQ68CZ1 1315 aa23.52■■□□□ 1.36
LGMN-204ENST00000553802 PPLO60437 1756 aa23.5■■□□□ 1.35
LGMN-204ENST00000553802 PHF23Q9BUL5 403 aaPredicted RBP23.49■■□□□ 1.35
LGMN-204ENST00000553802 NCOA3Q9Y6Q9 1424 aa23.49■■□□□ 1.35
LGMN-204ENST00000553802 RGL3Q3MIN7 710 aa23.47■■□□□ 1.35
LGMN-204ENST00000553802 PTPRUQ92729 1446 aa23.47■■□□□ 1.35
LGMN-204ENST00000553802 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.47■■□□□ 1.35
LGMN-204ENST00000553802 METP08581 1390 aa23.46■■□□□ 1.35
LGMN-204ENST00000553802 ATF3P18847 181 aa23.46■■□□□ 1.35
LGMN-204ENST00000553802 PHLPP1O60346 1717 aa23.45■■□□□ 1.34
LGMN-204ENST00000553802 XRN1Q8IZH2 1706 aaKnown RBP23.45■■□□□ 1.34
LGMN-204ENST00000553802 SLAIN2Q9P270 581 aa23.45■■□□□ 1.34
LGMN-204ENST00000553802 CADPS2Q86UW7 1296 aa23.43■■□□□ 1.34
LGMN-204ENST00000553802 C19orf44Q9H6X5 657 aa23.43■■□□□ 1.34
LGMN-204ENST00000553802 ANKRD30BQ9BXX2 1392 aa23.4■■□□□ 1.34
LGMN-204ENST00000553802 SPATA31E1Q6ZUB1 1445 aa23.39■■□□□ 1.33
LGMN-204ENST00000553802 SETD1AO15047 1707 aaKnown RBP23.38■■□□□ 1.33
LGMN-204ENST00000553802 COL16A1Q07092 1604 aaPredicted RBP23.37■■□□□ 1.33
LGMN-204ENST00000553802 IFT172Q9UG01 1749 aa23.36■■□□□ 1.33
LGMN-204ENST00000553802 RGS17Q9UGC6 210 aaPredicted RBP23.36■■□□□ 1.33
LGMN-204ENST00000553802 ADGRF5Q8IZF2 1346 aa23.34■■□□□ 1.33
LGMN-204ENST00000553802 DCCP43146 1447 aa23.34■■□□□ 1.33
LGMN-204ENST00000553802 HRCP23327 699 aa23.33■■□□□ 1.33
LGMN-204ENST00000553802 PTCH1Q13635 1447 aa23.32■■□□□ 1.32
LGMN-204ENST00000553802 ADGRL3Q9HAR2 1447 aa23.32■■□□□ 1.32
LGMN-204ENST00000553802 AHDC1Q5TGY3 1603 aaPredicted RBP23.31■■□□□ 1.32
LGMN-204ENST00000553802 NALCNQ8IZF0 1738 aa23.3■■□□□ 1.32
LGMN-204ENST00000553802 JCADQ9P266 1359 aa23.29■■□□□ 1.32
LGMN-204ENST00000553802 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.31
LGMN-204ENST00000553802 PIK3C2GO75747 1445 aa23.26■■□□□ 1.31
LGMN-204ENST00000553802 STK26Q9P289 416 aa23.26■■□□□ 1.31
LGMN-204ENST00000553802 SHPRHQ149N8 1683 aa23.25■■□□□ 1.31
LGMN-204ENST00000553802 BRINP3Q76B58 766 aa23.24■■□□□ 1.31
LGMN-204ENST00000553802 MST1RQ04912 1400 aa23.24■■□□□ 1.31
LGMN-204ENST00000553802 MYOM2P54296 1465 aa23.24■■□□□ 1.31
LGMN-204ENST00000553802 ASXL1Q8IXJ9 1541 aa23.23■■□□□ 1.31
LGMN-204ENST00000553802 PRAG1Q86YV5 1406 aa23.23■■□□□ 1.31
LGMN-204ENST00000553802 POTEAQ6S8J7 498 aa23.22■■□□□ 1.31
LGMN-204ENST00000553802 LAMC1P11047 1609 aa23.22■■□□□ 1.31
LGMN-204ENST00000553802 NHSL1Q5SYE7 1610 aa23.22■■□□□ 1.31
LGMN-204ENST00000553802 TMEM132EQ6IEE7 984 aa23.21■■□□□ 1.31
LGMN-204ENST00000553802 LRP6O75581 1613 aa23.21■■□□□ 1.31
LGMN-204ENST00000553802 LRPPRCP42704 1394 aaKnown RBP23.2■■□□□ 1.3
LGMN-204ENST00000553802 KNDC1Q76NI1 1749 aa23.19■■□□□ 1.3
LGMN-204ENST00000553802 KDM2AQ9Y2K7 1162 aa23.18■■□□□ 1.3
LGMN-204ENST00000553802 YTHDC2Q9H6S0 1430 aaKnown RBP23.17■■□□□ 1.3
LGMN-204ENST00000553802 SPATA31A6Q5VVP1 1343 aa23.17■■□□□ 1.3
LGMN-204ENST00000553802 DCAF11Q8TEB1 546 aa23.17■■□□□ 1.3
LGMN-204ENST00000553802 C14orf93Q9H972 538 aaKnown RBP23.17■■□□□ 1.3
LGMN-204ENST00000553802 NRXN1Q9ULB1 1477 aa23.17■■□□□ 1.3
LGMN-204ENST00000553802 TECPR2O15040 1411 aa23.16■■□□□ 1.3
LGMN-204ENST00000553802 DHX57Q6P158 1386 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms