RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 ROCK1Q13464 1354 aa19.12■□□□□ 0.65
ARHGEF40-202ENST00000553709 GPATCH3Q96I76 525 aa19.11■□□□□ 0.65
ARHGEF40-202ENST00000553709 HTATSF1O43719 755 aaKnown RBP19.11■□□□□ 0.65
ARHGEF40-202ENST00000553709 ZKSCAN2Q63HK3 967 aa19.11■□□□□ 0.65
ARHGEF40-202ENST00000553709 NGDNQ8NEJ9 315 aaKnown RBP19.11■□□□□ 0.65
ARHGEF40-202ENST00000553709 KIF7Q2M1P5 1343 aa19.1■□□□□ 0.65
ARHGEF40-202ENST00000553709 EVC2Q86UK5 1308 aa19.1■□□□□ 0.65
ARHGEF40-202ENST00000553709 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
ARHGEF40-202ENST00000553709 UGGT2Q9NYU1 1516 aa19.1■□□□□ 0.65
ARHGEF40-202ENST00000553709 NAIPQ13075 1403 aa19.1■□□□□ 0.65
ARHGEF40-202ENST00000553709 APAF1O14727 1248 aa19.1■□□□□ 0.65
ARHGEF40-202ENST00000553709 FANCIQ9NVI1 1328 aa19.1■□□□□ 0.65
ARHGEF40-202ENST00000553709 VGFO15240 615 aaPredicted RBP19.1■□□□□ 0.65
ARHGEF40-202ENST00000553709 AFAP1Q8N556 730 aa19.1■□□□□ 0.65
ARHGEF40-202ENST00000553709 AMPHP49418 695 aa19.09■□□□□ 0.65
ARHGEF40-202ENST00000553709 FAM69CQ0P6D2 419 aa19.09■□□□□ 0.65
ARHGEF40-202ENST00000553709 EID1Q9Y6B2 187 aa19.09■□□□□ 0.65
ARHGEF40-202ENST00000553709 FOXD4L1Q9NU39 408 aa19.09■□□□□ 0.65
ARHGEF40-202ENST00000553709 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.09■□□□□ 0.65
ARHGEF40-202ENST00000553709 KIF14Q15058 1648 aa19.09■□□□□ 0.65
ARHGEF40-202ENST00000553709 COG6Q9Y2V7 657 aa19.08■□□□□ 0.65
ARHGEF40-202ENST00000553709 CNTLNQ9NXG0 1405 aa19.08■□□□□ 0.64
ARHGEF40-202ENST00000553709 ARHGEF11O15085 1522 aa19.08■□□□□ 0.64
ARHGEF40-202ENST00000553709 ST18O60284 1047 aa19.08■□□□□ 0.64
ARHGEF40-202ENST00000553709 PBRM1Q86U86 1689 aa19.07■□□□□ 0.64
ARHGEF40-202ENST00000553709 NGEFQ8N5V2 710 aa19.07■□□□□ 0.64
ARHGEF40-202ENST00000553709 RAPGEF6Q8TEU7 1601 aa19.06■□□□□ 0.64
ARHGEF40-202ENST00000553709 ZNF330Q9Y3S2 320 aaPredicted RBP19.06■□□□□ 0.64
ARHGEF40-202ENST00000553709 CAMSAP2Q08AD1 1489 aa19.06■□□□□ 0.64
ARHGEF40-202ENST00000553709 SLC4A3P48751 1232 aa19.05■□□□□ 0.64
ARHGEF40-202ENST00000553709 ELL2O00472 640 aaPredicted RBP19.05■□□□□ 0.64
ARHGEF40-202ENST00000553709 WDR97A6NE52 1622 aa19.04■□□□□ 0.64
ARHGEF40-202ENST00000553709 DDX11L8A8MPP1 907 aa19.04■□□□□ 0.64
ARHGEF40-202ENST00000553709 NOL8Q76FK4 1167 aaKnown RBP19.04■□□□□ 0.64
ARHGEF40-202ENST00000553709 ANKRD45Q5TZF3 282 aa19.04■□□□□ 0.64
ARHGEF40-202ENST00000553709 NUTM2FA1L443 756 aa19.03■□□□□ 0.64
ARHGEF40-202ENST00000553709 KIAA0556O60303 1618 aa19.03■□□□□ 0.64
ARHGEF40-202ENST00000553709 GORABQ5T7V8 394 aa19.03■□□□□ 0.64
ARHGEF40-202ENST00000553709 CSPP1Q1MSJ5 1256 aa19.02■□□□□ 0.64
ARHGEF40-202ENST00000553709 COG3Q96JB2 828 aa19.02■□□□□ 0.64
ARHGEF40-202ENST00000553709 ABCC5O15440 1437 aa19.02■□□□□ 0.64
ARHGEF40-202ENST00000553709 KIAA1107Q9UPP5 1409 aa19.02■□□□□ 0.64
ARHGEF40-202ENST00000553709 CHMP3Q9Y3E7 222 aa19.02■□□□□ 0.64
ARHGEF40-202ENST00000553709 LTV1Q96GA3 475 aaPredicted RBP19.02■□□□□ 0.63
ARHGEF40-202ENST00000553709 STAC3Q96MF2 364 aa19.01■□□□□ 0.63
ARHGEF40-202ENST00000553709 WASHC2AQ641Q2 1341 aa19■□□□□ 0.63
ARHGEF40-202ENST00000553709 CCDC141Q6ZP82 1450 aa19■□□□□ 0.63
ARHGEF40-202ENST00000553709 TARBP1Q13395 1621 aaKnown RBP19■□□□□ 0.63
ARHGEF40-202ENST00000553709 HSP90B1P14625 803 aaKnown RBP19■□□□□ 0.63
ARHGEF40-202ENST00000553709 DDX19BQ9UMR2 479 aa18.99■□□□□ 0.63
ARHGEF40-202ENST00000553709 MINK1Q8N4C8 1332 aaPredicted RBP18.99■□□□□ 0.63
ARHGEF40-202ENST00000553709 NUP153P49790 1475 aaKnown RBP18.99■□□□□ 0.63
ARHGEF40-202ENST00000553709 CFAP43Q8NDM7 1665 aa18.99■□□□□ 0.63
ARHGEF40-202ENST00000553709 GSE1Q14687 1217 aa18.98■□□□□ 0.63
ARHGEF40-202ENST00000553709 AKNAQ7Z591 1439 aa18.97■□□□□ 0.63
ARHGEF40-202ENST00000553709 DIAPH1O60610 1272 aaKnown RBP18.97■□□□□ 0.63
ARHGEF40-202ENST00000553709 TAF7LQ5H9L4 462 aa18.97■□□□□ 0.63
ARHGEF40-202ENST00000553709 KIF16BQ96L93 1317 aa18.96■□□□□ 0.63
ARHGEF40-202ENST00000553709 PHF14O94880 888 aa18.96■□□□□ 0.63
ARHGEF40-202ENST00000553709 DZIP1LQ8IYY4 767 aaKnown RBP18.96■□□□□ 0.63
ARHGEF40-202ENST00000553709 NUP160Q12769 1436 aa18.95■□□□□ 0.62
ARHGEF40-202ENST00000553709 SCAPERQ9BY12 1400 aa18.95■□□□□ 0.62
ARHGEF40-202ENST00000553709 RUNDC1Q96C34 613 aa18.95■□□□□ 0.62
ARHGEF40-202ENST00000553709 TPM4P67936 248 aa18.95■□□□□ 0.62
ARHGEF40-202ENST00000553709 ISY1Q9ULR0 285 aaKnown RBP18.94■□□□□ 0.62
ARHGEF40-202ENST00000553709 BRD4O60885 1362 aaPredicted RBP18.94■□□□□ 0.62
ARHGEF40-202ENST00000553709 RILPL2Q969X0 211 aa18.94■□□□□ 0.62
ARHGEF40-202ENST00000553709 FOXD4L5Q5VV16 416 aaPredicted RBP18.94■□□□□ 0.62
ARHGEF40-202ENST00000553709 FOXD4L4Q8WXT5 416 aaPredicted RBP18.94■□□□□ 0.62
ARHGEF40-202ENST00000553709 ATP10BO94823 1461 aa18.94■□□□□ 0.62
ARHGEF40-202ENST00000553709 RIPK4P57078 832 aa18.93■□□□□ 0.62
ARHGEF40-202ENST00000553709 SKOR2Q2VWA4 1001 aaPredicted RBP18.93■□□□□ 0.62
ARHGEF40-202ENST00000553709 DDX49Q9Y6V7 483 aaKnown RBP18.93■□□□□ 0.62
ARHGEF40-202ENST00000553709 GPATCH8Q9UKJ3 1502 aaKnown RBP18.92■□□□□ 0.62
ARHGEF40-202ENST00000553709 API5Q9BZZ5 524 aaKnown RBP18.91■□□□□ 0.62
ARHGEF40-202ENST00000553709 NCOA1Q15788 1441 aa18.9■□□□□ 0.62
ARHGEF40-202ENST00000553709 CCDC34Q96HJ3 373 aa18.9■□□□□ 0.62
ARHGEF40-202ENST00000553709 KIF3AQ9Y496 699 aa18.9■□□□□ 0.62
ARHGEF40-202ENST00000553709 AMER1Q5JTC6 1135 aaPredicted RBP18.9■□□□□ 0.62
ARHGEF40-202ENST00000553709 SAMD9Q5K651 1589 aa18.9■□□□□ 0.62
ARHGEF40-202ENST00000553709 DISP1Q96F81 1524 aa18.89■□□□□ 0.61
ARHGEF40-202ENST00000553709 REC8O95072 547 aa18.88■□□□□ 0.61
ARHGEF40-202ENST00000553709 ARID3AQ99856 593 aa18.88■□□□□ 0.61
ARHGEF40-202ENST00000553709 AAMPQ13685 434 aa18.87■□□□□ 0.61
ARHGEF40-202ENST00000553709 ATP6V1DQ9Y5K8 247 aa18.86■□□□□ 0.61
ARHGEF40-202ENST00000553709 ITSN2Q9NZM3 1697 aa18.86■□□□□ 0.61
ARHGEF40-202ENST00000553709 ADAMTS8Q9UP79 889 aa18.86■□□□□ 0.61
ARHGEF40-202ENST00000553709 TEFQ10587 303 aa18.86■□□□□ 0.61
ARHGEF40-202ENST00000553709 C1orf141Q5JVX7 400 aa18.85■□□□□ 0.61
ARHGEF40-202ENST00000553709 CCDC9Q9Y3X0 531 aaKnown RBP18.85■□□□□ 0.61
ARHGEF40-202ENST00000553709 CHMP5Q9NZZ3 219 aa18.85■□□□□ 0.61
ARHGEF40-202ENST00000553709 CD109Q6YHK3 1445 aa18.85■□□□□ 0.61
ARHGEF40-202ENST00000553709 DIAPH3Q9NSV4 1193 aa18.83■□□□□ 0.61
ARHGEF40-202ENST00000553709 GNAI1P63096 354 aa18.83■□□□□ 0.6
ARHGEF40-202ENST00000553709 SF3A1Q15459 793 aaKnown RBP18.83■□□□□ 0.6
ARHGEF40-202ENST00000553709 ANKRD30BQ9BXX2 1392 aa18.83■□□□□ 0.6
ARHGEF40-202ENST00000553709 TCOF1Q13428 1488 aaKnown RBP18.83■□□□□ 0.6
ARHGEF40-202ENST00000553709 PTPRKQ15262 1439 aa18.82■□□□□ 0.6
ARHGEF40-202ENST00000553709 PANK1Q8TE04 598 aa18.82■□□□□ 0.6
ARHGEF40-202ENST00000553709 NBPF8Q3BBV2 869 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms