RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 RPGRIP1LQ68CZ1 1315 aa27.37■■□□□ 1.97
RBFOX1-215ENST00000553186 KIF7Q2M1P5 1343 aa27.36■■□□□ 1.97
RBFOX1-215ENST00000553186 SPATA31D1Q6ZQQ2 1576 aa27.34■■□□□ 1.97
RBFOX1-215ENST00000553186 ZMYM3Q14202 1370 aa27.34■■□□□ 1.97
RBFOX1-215ENST00000553186 ESF1Q9H501 851 aaKnown RBP27.32■■□□□ 1.96
RBFOX1-215ENST00000553186 PPLO60437 1756 aa27.31■■□□□ 1.96
RBFOX1-215ENST00000553186 POLR1AO95602 1720 aaPredicted RBP27.31■■□□□ 1.96
RBFOX1-215ENST00000553186 KIAA1210Q9ULL0 1709 aa27.3■■□□□ 1.96
RBFOX1-215ENST00000553186 TMEM131LA2VDJ0 1609 aa27.29■■□□□ 1.96
RBFOX1-215ENST00000553186 CFAP70Q5T0N1 1121 aa27.28■■□□□ 1.96
RBFOX1-215ENST00000553186 NEXMIFQ5QGS0 1516 aa27.27■■□□□ 1.96
RBFOX1-215ENST00000553186 PIK3C2GO75747 1445 aa27.27■■□□□ 1.96
RBFOX1-215ENST00000553186 TESK2Q96S53 571 aa27.24■■□□□ 1.95
RBFOX1-215ENST00000553186 SCAF11Q99590 1463 aaKnown RBP27.23■■□□□ 1.95
RBFOX1-215ENST00000553186 IQGAP1P46940 1657 aa27.22■■□□□ 1.95
RBFOX1-215ENST00000553186 VGFO15240 615 aaPredicted RBP27.22■■□□□ 1.95
RBFOX1-215ENST00000553186 ZFYVE9O95405 1425 aa27.22■■□□□ 1.95
RBFOX1-215ENST00000553186 C14orf93Q9H972 538 aaKnown RBP27.21■■□□□ 1.95
RBFOX1-215ENST00000553186 MYO5BQ9ULV0 1848 aa27.19■■□□□ 1.94
RBFOX1-215ENST00000553186 NUTM2DQ5VT03 806 aaPredicted RBP27.18■■□□□ 1.94
RBFOX1-215ENST00000553186 A2ML1A8K2U0 1454 aa27.17■■□□□ 1.94
RBFOX1-215ENST00000553186 ANP32CO43423 234 aa27.16■■□□□ 1.94
RBFOX1-215ENST00000553186 SETBP1Q9Y6X0 1596 aa27.16■■□□□ 1.94
RBFOX1-215ENST00000553186 STAG3Q9UJ98 1225 aa27.15■■□□□ 1.94
RBFOX1-215ENST00000553186 TNRQ92752 1358 aa27.15■■□□□ 1.94
RBFOX1-215ENST00000553186 ADGRB1O14514 1584 aa27.14■■□□□ 1.94
RBFOX1-215ENST00000553186 POLR3GLQ9BT43 218 aa27.12■■□□□ 1.93
RBFOX1-215ENST00000553186 DISP3Q9P2K9 1392 aa27.12■■□□□ 1.93
RBFOX1-215ENST00000553186 EIF3AQ14152 1382 aaKnown RBP27.11■■□□□ 1.93
RBFOX1-215ENST00000553186 CEBPAP49715 358 aaPredicted RBP27.09■■□□□ 1.93
RBFOX1-215ENST00000553186 TMF1P82094 1093 aa27.08■■□□□ 1.93
RBFOX1-215ENST00000553186 TMEM132EQ6IEE7 984 aa27.07■■□□□ 1.92
RBFOX1-215ENST00000553186 FER1L4A9Z1Z3 1794 aa27.06■■□□□ 1.92
RBFOX1-215ENST00000553186 RIMS2Q9UQ26 1411 aa27.05■■□□□ 1.92
RBFOX1-215ENST00000553186 C3P01024 1663 aa27.04■■□□□ 1.92
RBFOX1-215ENST00000553186 CCER2I3L3R5 266 aa27.04■■□□□ 1.92
RBFOX1-215ENST00000553186 KDM5AP29375 1690 aaKnown RBP27.01■■□□□ 1.91
RBFOX1-215ENST00000553186 NLRP1Q9C000 1473 aa27.01■■□□□ 1.91
RBFOX1-215ENST00000553186 MYO3AQ8NEV4 1616 aa27■■□□□ 1.91
RBFOX1-215ENST00000553186 TRAK1Q9UPV9 953 aa27■■□□□ 1.91
RBFOX1-215ENST00000553186 ASXL1Q8IXJ9 1541 aa26.99■■□□□ 1.91
RBFOX1-215ENST00000553186 SBNO2Q9Y2G9 1366 aa26.98■■□□□ 1.91
RBFOX1-215ENST00000553186 YTHDC1Q96MU7 727 aaKnown RBP26.98■■□□□ 1.91
RBFOX1-215ENST00000553186 PRKRIP1Q9H875 184 aaPredicted RBP26.98■■□□□ 1.91
RBFOX1-215ENST00000553186 UBR1Q8IWV7 1749 aa26.97■■□□□ 1.91
RBFOX1-215ENST00000553186 CENPJQ9HC77 1338 aaPredicted RBP26.96■■□□□ 1.91
RBFOX1-215ENST00000553186 SLC24A1O60721 1099 aa26.96■■□□□ 1.91
RBFOX1-215ENST00000553186 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.96■■□□□ 1.91
RBFOX1-215ENST00000553186 SENP3Q9H4L4 574 aaPredicted RBP26.96■■□□□ 1.91
RBFOX1-215ENST00000553186 ALKQ9UM73 1620 aa26.96■■□□□ 1.91
RBFOX1-215ENST00000553186 TMEM2Q9UHN6 1383 aa26.95■■□□□ 1.9
RBFOX1-215ENST00000553186 CDCA8Q53HL2 280 aa26.94■■□□□ 1.9
RBFOX1-215ENST00000553186 HDGFP51858 240 aaKnown RBP26.91■■□□□ 1.9
RBFOX1-215ENST00000553186 PLPPR3Q6T4P5 718 aa26.91■■□□□ 1.9
RBFOX1-215ENST00000553186 PTPRMP28827 1452 aa26.9■■□□□ 1.9
RBFOX1-215ENST00000553186 ADAMTSL3P82987 1691 aa26.9■■□□□ 1.9
RBFOX1-215ENST00000553186 YTHDC2Q9H6S0 1430 aaKnown RBP26.89■■□□□ 1.89
RBFOX1-215ENST00000553186 PER1O15534 1290 aaPredicted RBP26.88■■□□□ 1.89
RBFOX1-215ENST00000553186 ARHGEF28Q8N1W1 1705 aaKnown RBP26.88■■□□□ 1.89
RBFOX1-215ENST00000553186 NRXN3Q9Y4C0 1643 aa26.87■■□□□ 1.89
RBFOX1-215ENST00000553186 RIMS1Q86UR5 1692 aaKnown RBP26.87■■□□□ 1.89
RBFOX1-215ENST00000553186 PANK3Q9H999 370 aa26.86■■□□□ 1.89
RBFOX1-215ENST00000553186 STK26Q9P289 416 aa26.85■■□□□ 1.89
RBFOX1-215ENST00000553186 QRICH2Q9H0J4 1663 aa26.85■■□□□ 1.89
RBFOX1-215ENST00000553186 SETD1AO15047 1707 aaKnown RBP26.85■■□□□ 1.89
RBFOX1-215ENST00000553186 LTKP29376 864 aa26.82■■□□□ 1.88
RBFOX1-215ENST00000553186 ARHGAP23Q9P227 1491 aa26.82■■□□□ 1.88
RBFOX1-215ENST00000553186 SLIT1O75093 1534 aa26.81■■□□□ 1.88
RBFOX1-215ENST00000553186 CENPBP07199 599 aaPredicted RBP26.81■■□□□ 1.88
RBFOX1-215ENST00000553186 LRPPRCP42704 1394 aaKnown RBP26.79■■□□□ 1.88
RBFOX1-215ENST00000553186 MYOM1P52179 1685 aa26.79■■□□□ 1.88
RBFOX1-215ENST00000553186 CCDC184Q52MB2 194 aa26.79■■□□□ 1.88
RBFOX1-215ENST00000553186 METP08581 1390 aa26.79■■□□□ 1.88
RBFOX1-215ENST00000553186 PLEKHG1Q9ULL1 1385 aa26.78■■□□□ 1.88
RBFOX1-215ENST00000553186 TXNDC2Q86VQ3 553 aa26.78■■□□□ 1.88
RBFOX1-215ENST00000553186 THEMISQ8N1K5 641 aaPredicted RBP26.78■■□□□ 1.88
RBFOX1-215ENST00000553186 PRAM1Q96QH2 718 aa26.77■■□□□ 1.88
RBFOX1-215ENST00000553186 ABCC11Q96J66 1382 aa26.77■■□□□ 1.88
RBFOX1-215ENST00000553186 CNGB1Q14028 1251 aaPredicted RBP26.76■■□□□ 1.87
RBFOX1-215ENST00000553186 ADAMTS13Q76LX8 1427 aa26.76■■□□□ 1.87
RBFOX1-215ENST00000553186 DLC1Q96QB1 1528 aa26.76■■□□□ 1.87
RBFOX1-215ENST00000553186 KTN1Q86UP2 1357 aaKnown RBP26.75■■□□□ 1.87
RBFOX1-215ENST00000553186 TULP4Q9NRJ4 1543 aa26.75■■□□□ 1.87
RBFOX1-215ENST00000553186 SAFB2Q14151 953 aaKnown RBP eCLIP26.74■■□□□ 1.87
RBFOX1-215ENST00000553186 PUS7Q96PZ0 661 aaKnown RBP26.74■■□□□ 1.87
RBFOX1-215ENST00000553186 EID1Q9Y6B2 187 aa26.74■■□□□ 1.87
RBFOX1-215ENST00000553186 CEP170BQ9Y4F5 1589 aaPredicted RBP26.74■■□□□ 1.87
RBFOX1-215ENST00000553186 EVC2Q86UK5 1308 aa26.73■■□□□ 1.87
RBFOX1-215ENST00000553186 RALBP1Q15311 655 aa26.73■■□□□ 1.87
RBFOX1-215ENST00000553186 POGKQ9P215 609 aa26.72■■□□□ 1.87
RBFOX1-215ENST00000553186 PARD3Q8TEW0 1356 aa26.71■■□□□ 1.87
RBFOX1-215ENST00000553186 MED14O60244 1454 aa26.71■■□□□ 1.87
RBFOX1-215ENST00000553186 BCANQ96GW7 911 aa26.71■■□□□ 1.87
RBFOX1-215ENST00000553186 MRS2Q9HD23 443 aa26.7■■□□□ 1.86
RBFOX1-215ENST00000553186 TECPR2O15040 1411 aa26.69■■□□□ 1.86
RBFOX1-215ENST00000553186 WAPLQ7Z5K2 1190 aa26.67■■□□□ 1.86
RBFOX1-215ENST00000553186 KNSTRNQ9Y448 316 aa26.67■■□□□ 1.86
RBFOX1-215ENST00000553186 MINK1Q8N4C8 1332 aaPredicted RBP26.66■■□□□ 1.86
RBFOX1-215ENST00000553186 PLEKHH1Q9ULM0 1364 aa26.66■■□□□ 1.86
RBFOX1-215ENST00000553186 AMER1Q5JTC6 1135 aaPredicted RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms