RNA–Protein interactions for RNA: ENST00000552862.1

CDK4-214, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-214ENST00000552862 NKTRP30414 1462 aaKnown RBP19■□□□□ 0.63
CDK4-214ENST00000552862 PIK3R4Q99570 1358 aa18.99■□□□□ 0.63
CDK4-214ENST00000552862 CHGAP10645 457 aaKnown RBP18.98■□□□□ 0.63
CDK4-214ENST00000552862 ADGRB3O60242 1522 aa18.98■□□□□ 0.63
CDK4-214ENST00000552862 SLAIN2Q9P270 581 aa18.97■□□□□ 0.63
CDK4-214ENST00000552862 MED1Q15648 1581 aaPredicted RBP18.97■□□□□ 0.63
CDK4-214ENST00000552862 C14orf37Q86TY3 774 aa18.96■□□□□ 0.63
CDK4-214ENST00000552862 CADPS2Q86UW7 1296 aa18.96■□□□□ 0.63
CDK4-214ENST00000552862 NUP155O75694 1391 aa18.94■□□□□ 0.62
CDK4-214ENST00000552862 ATF3P18847 181 aa18.94■□□□□ 0.62
CDK4-214ENST00000552862 C19orf44Q9H6X5 657 aa18.94■□□□□ 0.62
CDK4-214ENST00000552862 TET3O43151 1660 aa18.94■□□□□ 0.62
CDK4-214ENST00000552862 RIMS2Q9UQ26 1411 aa18.93■□□□□ 0.62
CDK4-214ENST00000552862 ACIN1Q9UKV3 1341 aaKnown RBP18.93■□□□□ 0.62
CDK4-214ENST00000552862 STRCP1A6NGW2 1772 aa18.89■□□□□ 0.61
CDK4-214ENST00000552862 ZFYVE9O95405 1425 aa18.89■□□□□ 0.61
CDK4-214ENST00000552862 GCC2Q8IWJ2 1684 aa18.87■□□□□ 0.61
CDK4-214ENST00000552862 DIP2AQ14689 1571 aa18.86■□□□□ 0.61
CDK4-214ENST00000552862 JCADQ9P266 1359 aa18.86■□□□□ 0.61
CDK4-214ENST00000552862 ITGAEP38570 1179 aa18.86■□□□□ 0.61
CDK4-214ENST00000552862 SENP3Q9H4L4 574 aaPredicted RBP18.86■□□□□ 0.61
CDK4-214ENST00000552862 ALKQ9UM73 1620 aa18.85■□□□□ 0.61
CDK4-214ENST00000552862 UNC13BO14795 1591 aa18.85■□□□□ 0.61
CDK4-214ENST00000552862 ZNF326Q5BKZ1 582 aaKnown RBP18.85■□□□□ 0.61
CDK4-214ENST00000552862 NWD1Q149M9 1564 aa18.85■□□□□ 0.61
CDK4-214ENST00000552862 SPATA31A6Q5VVP1 1343 aa18.84■□□□□ 0.61
CDK4-214ENST00000552862 TMEM131LA2VDJ0 1609 aa18.82■□□□□ 0.6
CDK4-214ENST00000552862 VGFO15240 615 aaPredicted RBP18.82■□□□□ 0.6
CDK4-214ENST00000552862 AMOTL2Q9Y2J4 779 aa18.82■□□□□ 0.6
CDK4-214ENST00000552862 ZNF772Q68DY9 489 aaPredicted RBP18.81■□□□□ 0.6
CDK4-214ENST00000552862 IQGAP3Q86VI3 1631 aa18.81■□□□□ 0.6
CDK4-214ENST00000552862 TRPM2O94759 1503 aa18.79■□□□□ 0.6
CDK4-214ENST00000552862 RPGRIP1LQ68CZ1 1315 aa18.78■□□□□ 0.6
CDK4-214ENST00000552862 DCCP43146 1447 aa18.78■□□□□ 0.6
CDK4-214ENST00000552862 CHD2O14647 1828 aaKnown RBP18.77■□□□□ 0.6
CDK4-214ENST00000552862 MEX3CQ5U5Q3 659 aaKnown RBP18.77■□□□□ 0.6
CDK4-214ENST00000552862 RBM33Q96EV2 1170 aaKnown RBP18.76■□□□□ 0.59
CDK4-214ENST00000552862 ROBO1Q9Y6N7 1651 aa18.76■□□□□ 0.59
CDK4-214ENST00000552862 XIRP1Q702N8 1843 aaKnown RBP18.75■□□□□ 0.59
CDK4-214ENST00000552862 LRRC59Q96AG4 307 aaKnown RBP18.75■□□□□ 0.59
CDK4-214ENST00000552862 ADAMTS13Q76LX8 1427 aa18.74■□□□□ 0.59
CDK4-214ENST00000552862 E9PCH4 1651 aa18.73■□□□□ 0.59
CDK4-214ENST00000552862 TRIM52Q96A61 297 aa18.73■□□□□ 0.59
CDK4-214ENST00000552862 NUTM2DQ5VT03 806 aaPredicted RBP18.72■□□□□ 0.59
CDK4-214ENST00000552862 RGS17Q9UGC6 210 aaPredicted RBP18.71■□□□□ 0.59
CDK4-214ENST00000552862 RRBP1Q9P2E9 1410 aaKnown RBP18.7■□□□□ 0.58
CDK4-214ENST00000552862 SLC4A1APQ9BWU0 796 aaKnown RBP18.69■□□□□ 0.58
CDK4-214ENST00000552862 PHLPP1O60346 1717 aa18.67■□□□□ 0.58
CDK4-214ENST00000552862 BRINP3Q76B58 766 aa18.66■□□□□ 0.58
CDK4-214ENST00000552862 SETBP1Q9Y6X0 1596 aa18.66■□□□□ 0.58
CDK4-214ENST00000552862 FOXD1Q16676 465 aa18.65■□□□□ 0.58
CDK4-214ENST00000552862 POTEAQ6S8J7 498 aa18.65■□□□□ 0.58
CDK4-214ENST00000552862 MYO5BQ9ULV0 1848 aa18.64■□□□□ 0.57
CDK4-214ENST00000552862 RXRBP28702 533 aa18.63■□□□□ 0.57
CDK4-214ENST00000552862 NAIPQ13075 1403 aa18.63■□□□□ 0.57
CDK4-214ENST00000552862 SPHKAPQ2M3C7 1700 aa18.63■□□□□ 0.57
CDK4-214ENST00000552862 PPARGC1BQ86YN6 1023 aaKnown RBP18.62■□□□□ 0.57
CDK4-214ENST00000552862 HFM1A2PYH4 1435 aa18.62■□□□□ 0.57
CDK4-214ENST00000552862 AHDC1Q5TGY3 1603 aaPredicted RBP18.62■□□□□ 0.57
CDK4-214ENST00000552862 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.61■□□□□ 0.57
CDK4-214ENST00000552862 SETD5Q9C0A6 1442 aa18.6■□□□□ 0.57
CDK4-214ENST00000552862 ADGRL3Q9HAR2 1447 aa18.59■□□□□ 0.57
CDK4-214ENST00000552862 NGLY1Q96IV0 654 aa18.59■□□□□ 0.57
CDK4-214ENST00000552862 METP08581 1390 aa18.58■□□□□ 0.57
CDK4-214ENST00000552862 PTPRUQ92729 1446 aa18.57■□□□□ 0.56
CDK4-214ENST00000552862 LRPPRCP42704 1394 aaKnown RBP18.57■□□□□ 0.56
CDK4-214ENST00000552862 KIF1BO60333 1816 aa18.57■□□□□ 0.56
CDK4-214ENST00000552862 COL16A1Q07092 1604 aaPredicted RBP18.56■□□□□ 0.56
CDK4-214ENST00000552862 ANKRD30BQ9BXX2 1392 aa18.56■□□□□ 0.56
CDK4-214ENST00000552862 PTCH1Q13635 1447 aa18.56■□□□□ 0.56
CDK4-214ENST00000552862 NUTM2BA6NNL0 878 aaPredicted RBP18.55■□□□□ 0.56
CDK4-214ENST00000552862 NUTM2EB1AL46 878 aaPredicted RBP18.55■□□□□ 0.56
CDK4-214ENST00000552862 NUTM2AQ8IVF1 878 aaPredicted RBP18.55■□□□□ 0.56
CDK4-214ENST00000552862 MST1RQ04912 1400 aa18.55■□□□□ 0.56
CDK4-214ENST00000552862 CCDC144AA2RUR9 1427 aa18.54■□□□□ 0.56
CDK4-214ENST00000552862 SHPRHQ149N8 1683 aa18.54■□□□□ 0.56
CDK4-214ENST00000552862 RBM6P78332 1123 aaKnown RBP18.53■□□□□ 0.56
CDK4-214ENST00000552862 CDK12Q9NYV4 1490 aaPredicted RBP18.52■□□□□ 0.56
CDK4-214ENST00000552862 NPHP3Q7Z494 1330 aa18.52■□□□□ 0.56
CDK4-214ENST00000552862 XRN1Q8IZH2 1706 aaKnown RBP18.52■□□□□ 0.56
CDK4-214ENST00000552862 PRAG1Q86YV5 1406 aa18.52■□□□□ 0.56
CDK4-214ENST00000552862 NEXMIFQ5QGS0 1516 aa18.52■□□□□ 0.56
CDK4-214ENST00000552862 ASXL1Q8IXJ9 1541 aa18.52■□□□□ 0.56
CDK4-214ENST00000552862 SIRT1Q96EB6 747 aa18.51■□□□□ 0.55
CDK4-214ENST00000552862 STAC3Q96MF2 364 aa18.51■□□□□ 0.55
CDK4-214ENST00000552862 QTRT2Q9H974 415 aaKnown RBP18.5■□□□□ 0.55
CDK4-214ENST00000552862 MPHOSPH9Q99550 1183 aa18.49■□□□□ 0.55
CDK4-214ENST00000552862 AFF2P51816 1311 aa18.49■□□□□ 0.55
CDK4-214ENST00000552862 SOS2Q07890 1332 aaPredicted RBP18.49■□□□□ 0.55
CDK4-214ENST00000552862 CLTCL1P53675 1640 aa18.48■□□□□ 0.55
CDK4-214ENST00000552862 C1orf167Q5SNV9 1468 aa18.47■□□□□ 0.55
CDK4-214ENST00000552862 C8orf37Q96NL8 207 aa18.47■□□□□ 0.55
CDK4-214ENST00000552862 NRXN3Q9Y4C0 1643 aa18.47■□□□□ 0.55
CDK4-214ENST00000552862 ESCO1Q5FWF5 840 aa18.46■□□□□ 0.55
CDK4-214ENST00000552862 TRPC5Q9UL62 973 aaPredicted RBP18.46■□□□□ 0.55
CDK4-214ENST00000552862 RGL3Q3MIN7 710 aa18.45■□□□□ 0.54
CDK4-214ENST00000552862 PNPLA6Q8IY17 1366 aa18.44■□□□□ 0.54
CDK4-214ENST00000552862 ABCC11Q96J66 1382 aa18.44■□□□□ 0.54
CDK4-214ENST00000552862 UPF1Q92900 1129 aaKnown RBP eCLIP18.44■□□□□ 0.54
CDK4-214ENST00000552862 PSME1Q06323 249 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms