RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 CHD2O14647 1828 aaKnown RBP17.39■□□□□ 0.37
TMEM116-218ENST00000552839 CHIC2Q9UKJ5 165 aa17.38■□□□□ 0.37
TMEM116-218ENST00000552839 MSH6P52701 1360 aa17.38■□□□□ 0.37
TMEM116-218ENST00000552839 SLAIN2Q9P270 581 aa17.37■□□□□ 0.37
TMEM116-218ENST00000552839 ANKRD30AQ9BXX3 1397 aa17.37■□□□□ 0.37
TMEM116-218ENST00000552839 BCANQ96GW7 911 aa17.36■□□□□ 0.37
TMEM116-218ENST00000552839 SLC52A1Q9NWF4 448 aa17.35■□□□□ 0.37
TMEM116-218ENST00000552839 JCADQ9P266 1359 aa17.35■□□□□ 0.37
TMEM116-218ENST00000552839 FGD6Q6ZV73 1430 aa17.35■□□□□ 0.37
TMEM116-218ENST00000552839 COL16A1Q07092 1604 aaPredicted RBP17.33■□□□□ 0.37
TMEM116-218ENST00000552839 ZFYVE9O95405 1425 aa17.33■□□□□ 0.36
TMEM116-218ENST00000552839 GCC2Q8IWJ2 1684 aa17.32■□□□□ 0.36
TMEM116-218ENST00000552839 PLEKHG1Q9ULL1 1385 aa17.31■□□□□ 0.36
TMEM116-218ENST00000552839 RPRD2Q5VT52 1461 aaKnown RBP17.3■□□□□ 0.36
TMEM116-218ENST00000552839 RIMS2Q9UQ26 1411 aa17.3■□□□□ 0.36
TMEM116-218ENST00000552839 TMEM131LA2VDJ0 1609 aa17.29■□□□□ 0.36
TMEM116-218ENST00000552839 LRP6O75581 1613 aa17.29■□□□□ 0.36
TMEM116-218ENST00000552839 ADGRL2O95490 1459 aa17.28■□□□□ 0.36
TMEM116-218ENST00000552839 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.27■□□□□ 0.36
TMEM116-218ENST00000552839 PPP1R15AO75807 674 aaPredicted RBP17.27■□□□□ 0.36
TMEM116-218ENST00000552839 TBX22Q9Y458 520 aa17.27■□□□□ 0.36
TMEM116-218ENST00000552839 NCOA3Q9Y6Q9 1424 aa17.27■□□□□ 0.35
TMEM116-218ENST00000552839 HDGFP51858 240 aaKnown RBP17.26■□□□□ 0.35
TMEM116-218ENST00000552839 FAM50AQ14320 339 aaKnown RBP17.26■□□□□ 0.35
TMEM116-218ENST00000552839 SPATA31A6Q5VVP1 1343 aa17.25■□□□□ 0.35
TMEM116-218ENST00000552839 ANKRD50Q9ULJ7 1429 aa17.24■□□□□ 0.35
TMEM116-218ENST00000552839 SHPRHQ149N8 1683 aa17.24■□□□□ 0.35
TMEM116-218ENST00000552839 UPF1Q92900 1129 aaKnown RBP eCLIP17.24■□□□□ 0.35
TMEM116-218ENST00000552839 AHDC1Q5TGY3 1603 aaPredicted RBP17.24■□□□□ 0.35
TMEM116-218ENST00000552839 ADAMTS13Q76LX8 1427 aa17.23■□□□□ 0.35
TMEM116-218ENST00000552839 MEX3CQ5U5Q3 659 aaKnown RBP17.23■□□□□ 0.35
TMEM116-218ENST00000552839 C14orf37Q86TY3 774 aa17.23■□□□□ 0.35
TMEM116-218ENST00000552839 NUTM2DQ5VT03 806 aaPredicted RBP17.22■□□□□ 0.35
TMEM116-218ENST00000552839 ZNF772Q68DY9 489 aaPredicted RBP17.22■□□□□ 0.35
TMEM116-218ENST00000552839 CADPS2Q86UW7 1296 aa17.22■□□□□ 0.35
TMEM116-218ENST00000552839 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.22■□□□□ 0.35
TMEM116-218ENST00000552839 TRIM52Q96A61 297 aa17.22■□□□□ 0.35
TMEM116-218ENST00000552839 C19orf44Q9H6X5 657 aa17.22■□□□□ 0.35
TMEM116-218ENST00000552839 CHGAP10645 457 aaKnown RBP17.21■□□□□ 0.35
TMEM116-218ENST00000552839 E9PCH4 1651 aa17.2■□□□□ 0.34
TMEM116-218ENST00000552839 DIP2AQ14689 1571 aa17.2■□□□□ 0.34
TMEM116-218ENST00000552839 ATF3P18847 181 aa17.2■□□□□ 0.34
TMEM116-218ENST00000552839 UNC13BO14795 1591 aa17.19■□□□□ 0.34
TMEM116-218ENST00000552839 PIK3R4Q99570 1358 aa17.18■□□□□ 0.34
TMEM116-218ENST00000552839 BRINP3Q76B58 766 aa17.17■□□□□ 0.34
TMEM116-218ENST00000552839 PTPRUQ92729 1446 aa17.17■□□□□ 0.34
TMEM116-218ENST00000552839 RXRBP28702 533 aa17.16■□□□□ 0.34
TMEM116-218ENST00000552839 TRPM2O94759 1503 aa17.16■□□□□ 0.34
TMEM116-218ENST00000552839 NUTM2BA6NNL0 878 aaPredicted RBP17.15■□□□□ 0.34
TMEM116-218ENST00000552839 NUTM2EB1AL46 878 aaPredicted RBP17.15■□□□□ 0.34
TMEM116-218ENST00000552839 NUTM2AQ8IVF1 878 aaPredicted RBP17.15■□□□□ 0.34
TMEM116-218ENST00000552839 AMOTL2Q9Y2J4 779 aa17.15■□□□□ 0.34
TMEM116-218ENST00000552839 RRBP1Q9P2E9 1410 aaKnown RBP17.14■□□□□ 0.33
TMEM116-218ENST00000552839 ITGAEP38570 1179 aa17.14■□□□□ 0.33
TMEM116-218ENST00000552839 CDK12Q9NYV4 1490 aaPredicted RBP17.12■□□□□ 0.33
TMEM116-218ENST00000552839 IQGAP3Q86VI3 1631 aa17.12■□□□□ 0.33
TMEM116-218ENST00000552839 DCCP43146 1447 aa17.12■□□□□ 0.33
TMEM116-218ENST00000552839 ASXL1Q8IXJ9 1541 aa17.11■□□□□ 0.33
TMEM116-218ENST00000552839 NHSL1Q5SYE7 1610 aa17.11■□□□□ 0.33
TMEM116-218ENST00000552839 NRXN3Q9Y4C0 1643 aa17.11■□□□□ 0.33
TMEM116-218ENST00000552839 XRN1Q8IZH2 1706 aaKnown RBP17.11■□□□□ 0.33
TMEM116-218ENST00000552839 SETD5Q9C0A6 1442 aa17.11■□□□□ 0.33
TMEM116-218ENST00000552839 AFF2P51816 1311 aa17.1■□□□□ 0.33
TMEM116-218ENST00000552839 MST1RQ04912 1400 aa17.09■□□□□ 0.33
TMEM116-218ENST00000552839 SETBP1Q9Y6X0 1596 aa17.06■□□□□ 0.32
TMEM116-218ENST00000552839 DDX17Q92841 729 aaKnown RBP17.06■□□□□ 0.32
TMEM116-218ENST00000552839 LRRC59Q96AG4 307 aaKnown RBP17.06■□□□□ 0.32
TMEM116-218ENST00000552839 NUP155O75694 1391 aa17.05■□□□□ 0.32
TMEM116-218ENST00000552839 RGS12O14924 1447 aa17.04■□□□□ 0.32
TMEM116-218ENST00000552839 METP08581 1390 aa17.04■□□□□ 0.32
TMEM116-218ENST00000552839 ROCK1Q13464 1354 aa17.04■□□□□ 0.32
TMEM116-218ENST00000552839 C8orf37Q96NL8 207 aa17.04■□□□□ 0.32
TMEM116-218ENST00000552839 QTRT2Q9H974 415 aaKnown RBP17.04■□□□□ 0.32
TMEM116-218ENST00000552839 SPHKAPQ2M3C7 1700 aa17.04■□□□□ 0.32
TMEM116-218ENST00000552839 PNPLA6Q8IY17 1366 aa17.03■□□□□ 0.32
TMEM116-218ENST00000552839 NALCNQ8IZF0 1738 aa17.02■□□□□ 0.32
TMEM116-218ENST00000552839 RBM6P78332 1123 aaKnown RBP17.02■□□□□ 0.32
TMEM116-218ENST00000552839 ADGRL3Q9HAR2 1447 aa17.01■□□□□ 0.31
TMEM116-218ENST00000552839 ZNF326Q5BKZ1 582 aaKnown RBP17■□□□□ 0.31
TMEM116-218ENST00000552839 TRIM26Q12899 539 aaPredicted RBP16.98■□□□□ 0.31
TMEM116-218ENST00000552839 NGLY1Q96IV0 654 aa16.97■□□□□ 0.31
TMEM116-218ENST00000552839 NEXMIFQ5QGS0 1516 aa16.96■□□□□ 0.31
TMEM116-218ENST00000552839 LAMC1P11047 1609 aa16.96■□□□□ 0.31
TMEM116-218ENST00000552839 ADAMTS2O95450 1211 aa16.96■□□□□ 0.31
TMEM116-218ENST00000552839 C1orf167Q5SNV9 1468 aa16.96■□□□□ 0.31
TMEM116-218ENST00000552839 CLTCL1P53675 1640 aa16.95■□□□□ 0.3
TMEM116-218ENST00000552839 KIF1BO60333 1816 aa16.93■□□□□ 0.3
TMEM116-218ENST00000552839 SOS2Q07890 1332 aaPredicted RBP16.93■□□□□ 0.3
TMEM116-218ENST00000552839 ORAI2Q96SN7 254 aa16.92■□□□□ 0.3
TMEM116-218ENST00000552839 USP21Q9UK80 565 aa16.91■□□□□ 0.3
TMEM116-218ENST00000552839 ATAD2Q6PL18 1390 aa16.9■□□□□ 0.3
TMEM116-218ENST00000552839 TRPC5Q9UL62 973 aaPredicted RBP16.9■□□□□ 0.3
TMEM116-218ENST00000552839 ROBO2Q9HCK4 1378 aa16.89■□□□□ 0.3
TMEM116-218ENST00000552839 PTCH1Q13635 1447 aa16.89■□□□□ 0.29
TMEM116-218ENST00000552839 FNBP4Q8N3X1 1017 aaPredicted RBP16.89■□□□□ 0.29
TMEM116-218ENST00000552839 COL22A1Q8NFW1 1626 aaPredicted RBP16.88■□□□□ 0.29
TMEM116-218ENST00000552839 ATRNO75882 1429 aa16.87■□□□□ 0.29
TMEM116-218ENST00000552839 MARF1Q9Y4F3 1742 aaKnown RBP16.86■□□□□ 0.29
TMEM116-218ENST00000552839 HFM1A2PYH4 1435 aa16.86■□□□□ 0.29
TMEM116-218ENST00000552839 VGFO15240 615 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms