RNA–Protein interactions for RNA: ENST00000552009.1

GNPTAB-209, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-209ENST00000552009 NECTIN2Q92692 538 aa13.11□□□□□ -0.31
GNPTAB-209ENST00000552009 KIF21AQ7Z4S6 1674 aa13.1□□□□□ -0.31
GNPTAB-209ENST00000552009 RNF40O75150 1001 aa13.1□□□□□ -0.31
GNPTAB-209ENST00000552009 ITGBL1O95965 494 aaPredicted RBP13.1□□□□□ -0.31
GNPTAB-209ENST00000552009 PTGDRQ13258 359 aa13.1□□□□□ -0.31
GNPTAB-209ENST00000552009 C3orf80F5H4A9 247 aa13.09□□□□□ -0.31
GNPTAB-209ENST00000552009 LAMC3Q9Y6N6 1575 aa13.09□□□□□ -0.31
GNPTAB-209ENST00000552009 KCNC4Q03721 635 aa13.08□□□□□ -0.32
GNPTAB-209ENST00000552009 FCHSD2O94868 740 aa13.07□□□□□ -0.32
GNPTAB-209ENST00000552009 A0A0G2JS52 829 aa13.06□□□□□ -0.32
GNPTAB-209ENST00000552009 RGS20O76081 388 aa13.06□□□□□ -0.32
GNPTAB-209ENST00000552009 SLF2Q8IX21 1173 aa13.06□□□□□ -0.32
GNPTAB-209ENST00000552009 RBM46Q8TBY0 533 aaKnown RBP13.05□□□□□ -0.32
GNPTAB-209ENST00000552009 TESPA1A2RU30 521 aaPredicted RBP13.04□□□□□ -0.32
GNPTAB-209ENST00000552009 EYA1Q99502 592 aa13.03□□□□□ -0.32
GNPTAB-209ENST00000552009 SWT1Q5T5J6 900 aaKnown RBP13.02□□□□□ -0.33
GNPTAB-209ENST00000552009 CADPSQ9ULU8 1353 aa13.02□□□□□ -0.33
GNPTAB-209ENST00000552009 PDS5BQ9NTI5 1447 aa13.02□□□□□ -0.33
GNPTAB-209ENST00000552009 VSIG10Q8N0Z9 540 aa13.01□□□□□ -0.33
GNPTAB-209ENST00000552009 DNAJB2P25686 324 aa12.99□□□□□ -0.33
GNPTAB-209ENST00000552009 KDM2AQ9Y2K7 1162 aa12.99□□□□□ -0.33
GNPTAB-209ENST00000552009 ADGRG1Q9Y653 693 aa12.98□□□□□ -0.33
GNPTAB-209ENST00000552009 HIC1Q14526 733 aa12.97□□□□□ -0.33
GNPTAB-209ENST00000552009 RSF1Q96T23 1441 aaPredicted RBP12.96□□□□□ -0.33
GNPTAB-209ENST00000552009 PRR14Q9BWN1 585 aa12.96□□□□□ -0.33
GNPTAB-209ENST00000552009 MRC2Q9UBG0 1479 aa12.96□□□□□ -0.34
GNPTAB-209ENST00000552009 TULP1O00294 542 aaPredicted RBP12.95□□□□□ -0.34
GNPTAB-209ENST00000552009 RBM26Q5T8P6 1007 aaKnown RBP12.95□□□□□ -0.34
GNPTAB-209ENST00000552009 IL21Q9HBE4 155 aa12.95□□□□□ -0.34
GNPTAB-209ENST00000552009 OATP04181 439 aa12.94□□□□□ -0.34
GNPTAB-209ENST00000552009 MTRQ99707 1265 aa12.93□□□□□ -0.34
GNPTAB-209ENST00000552009 APLP1P51693 650 aa12.92□□□□□ -0.34
GNPTAB-209ENST00000552009 TJAP1Q5JTD0 557 aa12.92□□□□□ -0.34
GNPTAB-209ENST00000552009 WDR62O43379 1518 aa12.92□□□□□ -0.34
GNPTAB-209ENST00000552009 RCCD1A6NED2 376 aa12.91□□□□□ -0.34
GNPTAB-209ENST00000552009 TMEM134Q9H6X4 195 aa12.91□□□□□ -0.34
GNPTAB-209ENST00000552009 FANCD2Q9BXW9 1451 aa12.91□□□□□ -0.34
GNPTAB-209ENST00000552009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.9□□□□□ -0.34
GNPTAB-209ENST00000552009 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
GNPTAB-209ENST00000552009 CEP164Q9UPV0 1460 aa12.9□□□□□ -0.34
GNPTAB-209ENST00000552009 TOP2AP11388 1531 aaKnown RBP12.89□□□□□ -0.35
GNPTAB-209ENST00000552009 GNPATO15228 680 aa12.89□□□□□ -0.35
GNPTAB-209ENST00000552009 RSPH4AQ5TD94 716 aa12.87□□□□□ -0.35
GNPTAB-209ENST00000552009 GPIHBP1Q8IV16 184 aa12.87□□□□□ -0.35
GNPTAB-209ENST00000552009 CFTRP13569 1480 aa12.86□□□□□ -0.35
GNPTAB-209ENST00000552009 KMT5BQ4FZB7 885 aa12.86□□□□□ -0.35
GNPTAB-209ENST00000552009 PXYLP1Q8TE99 480 aa12.85□□□□□ -0.35
GNPTAB-209ENST00000552009 COPS2P61201 443 aa12.84□□□□□ -0.35
GNPTAB-209ENST00000552009 PCDHB3Q9Y5E6 796 aa12.84□□□□□ -0.35
GNPTAB-209ENST00000552009 URB2Q14146 1524 aaKnown RBP12.83□□□□□ -0.36
GNPTAB-209ENST00000552009 METTL3Q86U44 580 aaKnown RBP12.82□□□□□ -0.36
GNPTAB-209ENST00000552009 IRX2Q9BZI1 471 aaPredicted RBP12.82□□□□□ -0.36
GNPTAB-209ENST00000552009 GGCXP38435 758 aa12.81□□□□□ -0.36
GNPTAB-209ENST00000552009 ZNF516Q92618 1163 aa12.81□□□□□ -0.36
GNPTAB-209ENST00000552009 CFHP08603 1231 aa12.79□□□□□ -0.36
GNPTAB-209ENST00000552009 GPR37O15354 613 aa12.78□□□□□ -0.36
GNPTAB-209ENST00000552009 CCDC88BA6NC98 1476 aa12.78□□□□□ -0.36
GNPTAB-209ENST00000552009 ZPR1O75312 459 aa12.77□□□□□ -0.37
GNPTAB-209ENST00000552009 FECHP22830 423 aa12.77□□□□□ -0.37
GNPTAB-209ENST00000552009 ACTN4O43707 911 aaKnown RBP12.76□□□□□ -0.37
GNPTAB-209ENST00000552009 PPP1R18Q6NYC8 613 aa12.76□□□□□ -0.37
GNPTAB-209ENST00000552009 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.76□□□□□ -0.37
GNPTAB-209ENST00000552009 BLOC1S3Q6QNY0 202 aa12.74□□□□□ -0.37
GNPTAB-209ENST00000552009 DAXXQ9UER7 740 aaPredicted RBP12.74□□□□□ -0.37
GNPTAB-209ENST00000552009 NKX2-3Q8TAU0 364 aa12.73□□□□□ -0.37
GNPTAB-209ENST00000552009 NR1I2O75469 434 aa12.72□□□□□ -0.37
GNPTAB-209ENST00000552009 SLC10A3P09131 477 aa12.72□□□□□ -0.37
GNPTAB-209ENST00000552009 RDH13Q8NBN7 331 aa12.72□□□□□ -0.37
GNPTAB-209ENST00000552009 SULF1Q8IWU6 871 aa12.71□□□□□ -0.37
GNPTAB-209ENST00000552009 TMUB1Q9BVT8 246 aa12.71□□□□□ -0.37
GNPTAB-209ENST00000552009 ZNF608Q9ULD9 1512 aaPredicted RBP12.7□□□□□ -0.38
GNPTAB-209ENST00000552009 PRKD2Q9BZL6 878 aa12.69□□□□□ -0.38
GNPTAB-209ENST00000552009 PRDM2Q13029 1718 aa12.68□□□□□ -0.38
GNPTAB-209ENST00000552009 DDX11L8A8MPP1 907 aa12.68□□□□□ -0.38
GNPTAB-209ENST00000552009 V9GY48 417 aaPredicted RBP12.67□□□□□ -0.38
GNPTAB-209ENST00000552009 MAP2K5Q13163 448 aa12.66□□□□□ -0.38
GNPTAB-209ENST00000552009 TOPBP1Q92547 1522 aa12.66□□□□□ -0.38
GNPTAB-209ENST00000552009 LAPTM4AQ15012 233 aa12.64□□□□□ -0.39
GNPTAB-209ENST00000552009 NLRP7Q8WX94 980 aa12.63□□□□□ -0.39
GNPTAB-209ENST00000552009 IFT140Q96RY7 1462 aa12.62□□□□□ -0.39
GNPTAB-209ENST00000552009 TLL1O43897 1013 aa12.62□□□□□ -0.39
GNPTAB-209ENST00000552009 MINK1Q8N4C8 1332 aaPredicted RBP12.62□□□□□ -0.39
GNPTAB-209ENST00000552009 ADH1BP00325 375 aa12.61□□□□□ -0.39
GNPTAB-209ENST00000552009 PHOX2BQ99453 314 aa12.61□□□□□ -0.39
GNPTAB-209ENST00000552009 IRF6O14896 467 aa12.6□□□□□ -0.39
GNPTAB-209ENST00000552009 SCUBE3Q8IX30 993 aa12.6□□□□□ -0.39
GNPTAB-209ENST00000552009 PUS10Q3MIT2 529 aaKnown RBP12.59□□□□□ -0.39
GNPTAB-209ENST00000552009 EIF4G3O43432 1585 aaKnown RBP12.59□□□□□ -0.39
GNPTAB-209ENST00000552009 DNMBPQ6XZF7 1577 aa12.59□□□□□ -0.39
GNPTAB-209ENST00000552009 ATP6V1AP38606 617 aa12.58□□□□□ -0.4
GNPTAB-209ENST00000552009 GCGRP47871 477 aa12.58□□□□□ -0.4
GNPTAB-209ENST00000552009 GRIPAP1Q4V328 841 aa12.58□□□□□ -0.4
GNPTAB-209ENST00000552009 Q6ZNB5 142 aa12.58□□□□□ -0.4
GNPTAB-209ENST00000552009 RNF223E7ERA6 249 aa12.57□□□□□ -0.4
GNPTAB-209ENST00000552009 GFRA3O60609 400 aa12.57□□□□□ -0.4
GNPTAB-209ENST00000552009 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.57□□□□□ -0.4
GNPTAB-209ENST00000552009 AQRO60306 1485 aaKnown RBP eCLIP12.57□□□□□ -0.4
GNPTAB-209ENST00000552009 S1PR4O95977 384 aa12.56□□□□□ -0.4
GNPTAB-209ENST00000552009 FUT2Q10981 343 aa12.56□□□□□ -0.4
GNPTAB-209ENST00000552009 ANKLE1Q8NAG6 615 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms