RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 MAST1Q9Y2H9 1570 aa10.74□□□□□ -0.69
PRPF40B-214ENST00000551320 SLC26A8Q96RN1 970 aa10.74□□□□□ -0.69
PRPF40B-214ENST00000551320 MED14O60244 1454 aa10.74□□□□□ -0.69
PRPF40B-214ENST00000551320 UBR1Q8IWV7 1749 aa10.73□□□□□ -0.69
PRPF40B-214ENST00000551320 IDI1Q13907 227 aa10.73□□□□□ -0.69
PRPF40B-214ENST00000551320 FAM50AQ14320 339 aaKnown RBP10.73□□□□□ -0.69
PRPF40B-214ENST00000551320 NUTM2DQ5VT03 806 aaPredicted RBP10.73□□□□□ -0.69
PRPF40B-214ENST00000551320 PTPN23Q9H3S7 1636 aa10.73□□□□□ -0.69
PRPF40B-214ENST00000551320 STAG3Q9UJ98 1225 aa10.72□□□□□ -0.69
PRPF40B-214ENST00000551320 DAPK1P53355 1430 aa10.72□□□□□ -0.69
PRPF40B-214ENST00000551320 SCAF11Q99590 1463 aaKnown RBP10.72□□□□□ -0.69
PRPF40B-214ENST00000551320 DUOX2Q9NRD8 1548 aa10.72□□□□□ -0.69
PRPF40B-214ENST00000551320 DEPDC5O75140 1603 aa10.72□□□□□ -0.69
PRPF40B-214ENST00000551320 PIK3C2BO00750 1634 aa10.71□□□□□ -0.69
PRPF40B-214ENST00000551320 ZC3H13Q5T200 1668 aaKnown RBP10.71□□□□□ -0.69
PRPF40B-214ENST00000551320 FGD6Q6ZV73 1430 aa10.7□□□□□ -0.7
PRPF40B-214ENST00000551320 BCANQ96GW7 911 aa10.7□□□□□ -0.7
PRPF40B-214ENST00000551320 RGS17Q9UGC6 210 aaPredicted RBP10.7□□□□□ -0.7
PRPF40B-214ENST00000551320 EIF2AK4Q9P2K8 1649 aaKnown RBP10.69□□□□□ -0.7
PRPF40B-214ENST00000551320 XIRP1Q702N8 1843 aaKnown RBP10.69□□□□□ -0.7
PRPF40B-214ENST00000551320 CROCC2H7BZ55 1655 aa10.69□□□□□ -0.7
PRPF40B-214ENST00000551320 ITGAEP38570 1179 aa10.68□□□□□ -0.7
PRPF40B-214ENST00000551320 EID1Q9Y6B2 187 aa10.68□□□□□ -0.7
PRPF40B-214ENST00000551320 PRDM15P57071 1507 aaPredicted RBP10.68□□□□□ -0.7
PRPF40B-214ENST00000551320 ARHGAP23Q9P227 1491 aa10.68□□□□□ -0.7
PRPF40B-214ENST00000551320 TMEM2Q9UHN6 1383 aa10.67□□□□□ -0.7
PRPF40B-214ENST00000551320 PROSER2Q86WR7 435 aaPredicted RBP10.67□□□□□ -0.7
PRPF40B-214ENST00000551320 SYNMO15061 1565 aa10.67□□□□□ -0.7
PRPF40B-214ENST00000551320 MAP3K1Q13233 1512 aa10.67□□□□□ -0.7
PRPF40B-214ENST00000551320 TMEM94Q12767 1356 aa10.66□□□□□ -0.7
PRPF40B-214ENST00000551320 CHGAP10645 457 aaKnown RBP10.66□□□□□ -0.7
PRPF40B-214ENST00000551320 RBM42Q9BTD8 480 aaKnown RBP10.66□□□□□ -0.7
PRPF40B-214ENST00000551320 ERBINQ96RT1 1412 aa10.66□□□□□ -0.7
PRPF40B-214ENST00000551320 SLIT1O75093 1534 aa10.65□□□□□ -0.7
PRPF40B-214ENST00000551320 VASPP50552 380 aaPredicted RBP10.65□□□□□ -0.7
PRPF40B-214ENST00000551320 KANK1Q14678 1352 aa10.65□□□□□ -0.71
PRPF40B-214ENST00000551320 ANKRD30AQ9BXX3 1397 aa10.65□□□□□ -0.71
PRPF40B-214ENST00000551320 POTEAQ6S8J7 498 aa10.64□□□□□ -0.71
PRPF40B-214ENST00000551320 ARHGAP31Q2M1Z3 1444 aa10.64□□□□□ -0.71
PRPF40B-214ENST00000551320 EFCAB6Q5THR3 1501 aa10.63□□□□□ -0.71
PRPF40B-214ENST00000551320 KCNA6P17658 529 aa10.62□□□□□ -0.71
PRPF40B-214ENST00000551320 RTN4Q9NQC3 1192 aaKnown RBP10.62□□□□□ -0.71
PRPF40B-214ENST00000551320 MYO5BQ9ULV0 1848 aa10.62□□□□□ -0.71
PRPF40B-214ENST00000551320 NOS1P29475 1434 aa10.61□□□□□ -0.71
PRPF40B-214ENST00000551320 AMER1Q5JTC6 1135 aaPredicted RBP10.61□□□□□ -0.71
PRPF40B-214ENST00000551320 TET3O43151 1660 aa10.6□□□□□ -0.71
PRPF40B-214ENST00000551320 PPP1R15AO75807 674 aaPredicted RBP10.6□□□□□ -0.71
PRPF40B-214ENST00000551320 ANKRD50Q9ULJ7 1429 aa10.59□□□□□ -0.71
PRPF40B-214ENST00000551320 ROBO1Q9Y6N7 1651 aa10.59□□□□□ -0.71
PRPF40B-214ENST00000551320 RIMS2Q9UQ26 1411 aa10.58□□□□□ -0.72
PRPF40B-214ENST00000551320 ADGRB3O60242 1522 aa10.58□□□□□ -0.72
PRPF40B-214ENST00000551320 LMTK2Q8IWU2 1503 aa10.58□□□□□ -0.72
PRPF40B-214ENST00000551320 AKT1S1Q96B36 256 aa10.58□□□□□ -0.72
PRPF40B-214ENST00000551320 C14orf37Q86TY3 774 aa10.57□□□□□ -0.72
PRPF40B-214ENST00000551320 SLAIN2Q9P270 581 aa10.57□□□□□ -0.72
PRPF40B-214ENST00000551320 GCC2Q8IWJ2 1684 aa10.57□□□□□ -0.72
PRPF40B-214ENST00000551320 ZFYVE9O95405 1425 aa10.56□□□□□ -0.72
PRPF40B-214ENST00000551320 FAM135BQ49AJ0 1406 aa10.56□□□□□ -0.72
PRPF40B-214ENST00000551320 ADGRL2O95490 1459 aa10.55□□□□□ -0.72
PRPF40B-214ENST00000551320 DDX17Q92841 729 aaKnown RBP10.55□□□□□ -0.72
PRPF40B-214ENST00000551320 SLC52A1Q9NWF4 448 aa10.55□□□□□ -0.72
PRPF40B-214ENST00000551320 SETD1AO15047 1707 aaKnown RBP10.55□□□□□ -0.72
PRPF40B-214ENST00000551320 TMEM131LA2VDJ0 1609 aa10.54□□□□□ -0.72
PRPF40B-214ENST00000551320 MSH6P52701 1360 aa10.53□□□□□ -0.72
PRPF40B-214ENST00000551320 PTPRUQ92729 1446 aa10.53□□□□□ -0.72
PRPF40B-214ENST00000551320 NUTM2BA6NNL0 878 aaPredicted RBP10.53□□□□□ -0.72
PRPF40B-214ENST00000551320 NUTM2EB1AL46 878 aaPredicted RBP10.53□□□□□ -0.72
PRPF40B-214ENST00000551320 IFNLR1Q8IU57 520 aaPredicted RBP10.53□□□□□ -0.72
PRPF40B-214ENST00000551320 NUTM2AQ8IVF1 878 aaPredicted RBP10.53□□□□□ -0.72
PRPF40B-214ENST00000551320 E9PCH4 1651 aa10.53□□□□□ -0.72
PRPF40B-214ENST00000551320 NUP155O75694 1391 aa10.52□□□□□ -0.72
PRPF40B-214ENST00000551320 PLEKHG1Q9ULL1 1385 aa10.52□□□□□ -0.72
PRPF40B-214ENST00000551320 ADAMTS13Q76LX8 1427 aa10.52□□□□□ -0.73
PRPF40B-214ENST00000551320 TRIM52Q96A61 297 aa10.52□□□□□ -0.73
PRPF40B-214ENST00000551320 PHLPP1O60346 1717 aa10.52□□□□□ -0.73
PRPF40B-214ENST00000551320 NWD1Q149M9 1564 aa10.52□□□□□ -0.73
PRPF40B-214ENST00000551320 LRP6O75581 1613 aa10.51□□□□□ -0.73
PRPF40B-214ENST00000551320 AMOTL2Q9Y2J4 779 aa10.51□□□□□ -0.73
PRPF40B-214ENST00000551320 CHD2O14647 1828 aaKnown RBP10.51□□□□□ -0.73
PRPF40B-214ENST00000551320 ZNF326Q5BKZ1 582 aaKnown RBP10.5□□□□□ -0.73
PRPF40B-214ENST00000551320 UNC13BO14795 1591 aa10.49□□□□□ -0.73
PRPF40B-214ENST00000551320 REM2Q8IYK8 340 aaPredicted RBP10.49□□□□□ -0.73
PRPF40B-214ENST00000551320 TBX22Q9Y458 520 aa10.49□□□□□ -0.73
PRPF40B-214ENST00000551320 KDM5AP29375 1690 aaKnown RBP10.49□□□□□ -0.73
PRPF40B-214ENST00000551320 NKTRP30414 1462 aaKnown RBP10.49□□□□□ -0.73
PRPF40B-214ENST00000551320 MEX3CQ5U5Q3 659 aaKnown RBP10.48□□□□□ -0.73
PRPF40B-214ENST00000551320 SPDYE1Q8NFV5 336 aaPredicted RBP10.48□□□□□ -0.73
PRPF40B-214ENST00000551320 METP08581 1390 aa10.48□□□□□ -0.73
PRPF40B-214ENST00000551320 COL16A1Q07092 1604 aaPredicted RBP10.47□□□□□ -0.73
PRPF40B-214ENST00000551320 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.47□□□□□ -0.73
PRPF40B-214ENST00000551320 ATF3P18847 181 aa10.47□□□□□ -0.73
PRPF40B-214ENST00000551320 BRINP3Q76B58 766 aa10.47□□□□□ -0.73
PRPF40B-214ENST00000551320 JCADQ9P266 1359 aa10.47□□□□□ -0.73
PRPF40B-214ENST00000551320 RPRD2Q5VT52 1461 aaKnown RBP10.47□□□□□ -0.73
PRPF40B-214ENST00000551320 MIER1Q8N108 512 aa10.46□□□□□ -0.73
PRPF40B-214ENST00000551320 PLCD3Q8N3E9 789 aa10.46□□□□□ -0.73
PRPF40B-214ENST00000551320 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.46□□□□□ -0.73
PRPF40B-214ENST00000551320 C19orf44Q9H6X5 657 aa10.46□□□□□ -0.73
PRPF40B-214ENST00000551320 IQGAP3Q86VI3 1631 aa10.45□□□□□ -0.74
PRPF40B-214ENST00000551320 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms