RNA–Protein interactions for RNA: ENST00000551189.1

DDX23-209, Transcript of DEAD-box helicase 23, human

TSL 4

Gene DDX23, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-209	ENST00000551189	PPL	O60437	1756 aa		13.92	□□□□□ -0.18
DDX23-209	ENST00000551189	NEXMIF	Q5QGS0	1516 aa		13.91	□□□□□ -0.18
DDX23-209	ENST00000551189	VGF	O15240	615 aa	Predicted RBP	13.91	□□□□□ -0.18
DDX23-209	ENST00000551189	RIMS2	Q9UQ26	1411 aa		13.9	□□□□□ -0.18
DDX23-209	ENST00000551189	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.9	□□□□□ -0.18
DDX23-209	ENST00000551189	ROCK2	O75116	1388 aa	Known RBP	13.9	□□□□□ -0.18
DDX23-209	ENST00000551189	RALGAPB	Q86X10	1494 aa		13.9	□□□□□ -0.18
DDX23-209	ENST00000551189	KDM5A	P29375	1690 aa	Known RBP	13.9	□□□□□ -0.18
DDX23-209	ENST00000551189	UBR1	Q8IWV7	1749 aa		13.9	□□□□□ -0.18
DDX23-209	ENST00000551189	ADGRF5	Q8IZF2	1346 aa		13.9	□□□□□ -0.19
DDX23-209	ENST00000551189	HDGF	P51858	240 aa	Known RBP	13.89	□□□□□ -0.19
DDX23-209	ENST00000551189	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
DDX23-209	ENST00000551189	TRPM1	Q7Z4N2	1603 aa		13.88	□□□□□ -0.19
DDX23-209	ENST00000551189	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.88	□□□□□ -0.19
DDX23-209	ENST00000551189	NRXN1	Q9ULB1	1477 aa		13.87	□□□□□ -0.19
DDX23-209	ENST00000551189	TMEM2	Q9UHN6	1383 aa		13.86	□□□□□ -0.19
DDX23-209	ENST00000551189	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.86	□□□□□ -0.19
DDX23-209	ENST00000551189	CARD11	Q9BXL7	1154 aa		13.86	□□□□□ -0.19
DDX23-209	ENST00000551189	ZFYVE9	O95405	1425 aa		13.86	□□□□□ -0.19
DDX23-209	ENST00000551189	ZNF142	P52746	1687 aa	Predicted RBP	13.85	□□□□□ -0.19
DDX23-209	ENST00000551189	PIK3C2G	O75747	1445 aa		13.85	□□□□□ -0.19
DDX23-209	ENST00000551189	KDM4F	A0A1W2PPD8	638 aa		13.85	□□□□□ -0.19
DDX23-209	ENST00000551189	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
DDX23-209	ENST00000551189	EID1	Q9Y6B2	187 aa		13.85	□□□□□ -0.19
DDX23-209	ENST00000551189	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.84	□□□□□ -0.19
DDX23-209	ENST00000551189	BCAN	Q96GW7	911 aa		13.84	□□□□□ -0.19
DDX23-209	ENST00000551189	KIAA1210	Q9ULL0	1709 aa		13.84	□□□□□ -0.19
DDX23-209	ENST00000551189	SETD1B	Q9UPS6	1966 aa	Known RBP	13.83	□□□□□ -0.19
DDX23-209	ENST00000551189	NBPF1	Q3BBV0	1214 aa		13.83	□□□□□ -0.2
DDX23-209	ENST00000551189	CFAP70	Q5T0N1	1121 aa		13.83	□□□□□ -0.2
DDX23-209	ENST00000551189	USP47	Q96K76	1375 aa		13.83	□□□□□ -0.2
DDX23-209	ENST00000551189	HSPA5	P11021	654 aa	Known RBP	13.82	□□□□□ -0.2
DDX23-209	ENST00000551189	TXNDC2	Q86VQ3	553 aa		13.82	□□□□□ -0.2
DDX23-209	ENST00000551189	LAMC1	P11047	1609 aa		13.82	□□□□□ -0.2
DDX23-209	ENST00000551189	GPRASP1	Q5JY77	1395 aa		13.82	□□□□□ -0.2
DDX23-209	ENST00000551189	SLIT1	O75093	1534 aa		13.81	□□□□□ -0.2
DDX23-209	ENST00000551189	C14orf93	Q9H972	538 aa	Known RBP	13.81	□□□□□ -0.2
DDX23-209	ENST00000551189	ARHGAP23	Q9P227	1491 aa		13.8	□□□□□ -0.2
DDX23-209	ENST00000551189	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.8	□□□□□ -0.2
DDX23-209	ENST00000551189	SETBP1	Q9Y6X0	1596 aa		13.79	□□□□□ -0.2
DDX23-209	ENST00000551189	LTK	P29376	864 aa		13.78	□□□□□ -0.2
DDX23-209	ENST00000551189	ANKLE2	Q86XL3	938 aa		13.78	□□□□□ -0.2
DDX23-209	ENST00000551189	EIF3A	Q14152	1382 aa	Known RBP	13.78	□□□□□ -0.2
DDX23-209	ENST00000551189	PLEKHG1	Q9ULL1	1385 aa		13.78	□□□□□ -0.2
DDX23-209	ENST00000551189	SCAF11	Q99590	1463 aa	Known RBP	13.78	□□□□□ -0.2
DDX23-209	ENST00000551189	ALK	Q9UM73	1620 aa		13.77	□□□□□ -0.21
DDX23-209	ENST00000551189	IQGAP1	P46940	1657 aa		13.75	□□□□□ -0.21
DDX23-209	ENST00000551189	TMEM132E	Q6IEE7	984 aa		13.75	□□□□□ -0.21
DDX23-209	ENST00000551189	ADGRB1	O14514	1584 aa		13.75	□□□□□ -0.21
DDX23-209	ENST00000551189	NRXN3	Q9Y4C0	1643 aa		13.73	□□□□□ -0.21
DDX23-209	ENST00000551189	ST20-MTHFS	A0A0A6YYL1	179 aa		13.73	□□□□□ -0.21
DDX23-209	ENST00000551189	STK26	Q9P289	416 aa		13.73	□□□□□ -0.21
DDX23-209	ENST00000551189	TRAK1	Q9UPV9	953 aa		13.73	□□□□□ -0.21
DDX23-209	ENST00000551189	DIP2A	Q14689	1571 aa		13.71	□□□□□ -0.21
DDX23-209	ENST00000551189	ASXL1	Q8IXJ9	1541 aa		13.71	□□□□□ -0.21
DDX23-209	ENST00000551189	ADAMTS13	Q76LX8	1427 aa		13.71	□□□□□ -0.22
DDX23-209	ENST00000551189	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.71	□□□□□ -0.22
DDX23-209	ENST00000551189	POLR1A	O95602	1720 aa	Predicted RBP	13.7	□□□□□ -0.22
DDX23-209	ENST00000551189	SLC26A8	Q96RN1	970 aa		13.7	□□□□□ -0.22
DDX23-209	ENST00000551189	SETD1A	O15047	1707 aa	Known RBP	13.7	□□□□□ -0.22
DDX23-209	ENST00000551189	NCKAP5L	Q9HCH0	1330 aa		13.69	□□□□□ -0.22
DDX23-209	ENST00000551189	NPHP4	O75161	1426 aa	Predicted RBP	13.69	□□□□□ -0.22
DDX23-209	ENST00000551189	MET	P08581	1390 aa		13.69	□□□□□ -0.22
DDX23-209	ENST00000551189	LRPPRC	P42704	1394 aa	Known RBP	13.69	□□□□□ -0.22
DDX23-209	ENST00000551189	LMTK3	Q96Q04	1460 aa		13.68	□□□□□ -0.22
DDX23-209	ENST00000551189	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.68	□□□□□ -0.22
DDX23-209	ENST00000551189	HSPA2	P54652	639 aa		13.68	□□□□□ -0.22
DDX23-209	ENST00000551189	POLR3GL	Q9BT43	218 aa		13.68	□□□□□ -0.22
DDX23-209	ENST00000551189	POGK	Q9P215	609 aa		13.68	□□□□□ -0.22
DDX23-209	ENST00000551189	TBX22	Q9Y458	520 aa		13.68	□□□□□ -0.22
DDX23-209	ENST00000551189	TMF1	P82094	1093 aa		13.67	□□□□□ -0.22
DDX23-209	ENST00000551189	MED14	O60244	1454 aa		13.67	□□□□□ -0.22
DDX23-209	ENST00000551189	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.66	□□□□□ -0.22
DDX23-209	ENST00000551189	DLC1	Q96QB1	1528 aa		13.65	□□□□□ -0.22
DDX23-209	ENST00000551189	SLC24A1	O60721	1099 aa		13.65	□□□□□ -0.22
DDX23-209	ENST00000551189	PRAM1	Q96QH2	718 aa		13.65	□□□□□ -0.22
DDX23-209	ENST00000551189	CCDC7	Q96M83	1385 aa		13.65	□□□□□ -0.22
DDX23-209	ENST00000551189	QRICH2	Q9H0J4	1663 aa		13.65	□□□□□ -0.22
DDX23-209	ENST00000551189	KNDC1	Q76NI1	1749 aa		13.64	□□□□□ -0.23
DDX23-209	ENST00000551189	ABCC11	Q96J66	1382 aa		13.64	□□□□□ -0.23
DDX23-209	ENST00000551189	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
DDX23-209	ENST00000551189	CDCA8	Q53HL2	280 aa		13.64	□□□□□ -0.23
DDX23-209	ENST00000551189	TESK2	Q96S53	571 aa		13.64	□□□□□ -0.23
DDX23-209	ENST00000551189	KIF7	Q2M1P5	1343 aa		13.64	□□□□□ -0.23
DDX23-209	ENST00000551189	PIK3R4	Q99570	1358 aa		13.63	□□□□□ -0.23
DDX23-209	ENST00000551189	WASHC2A	Q641Q2	1341 aa		13.63	□□□□□ -0.23
DDX23-209	ENST00000551189	SBNO2	Q9Y2G9	1366 aa		13.62	□□□□□ -0.23
DDX23-209	ENST00000551189	C11orf95	C9JLR9	678 aa	Predicted RBP	13.62	□□□□□ -0.23
DDX23-209	ENST00000551189	DIEXF	Q68CQ4	756 aa	Known RBP	13.62	□□□□□ -0.23
DDX23-209	ENST00000551189	AMOTL2	Q9Y2J4	779 aa		13.62	□□□□□ -0.23
DDX23-209	ENST00000551189	CPS1	P31327	1500 aa		13.62	□□□□□ -0.23
DDX23-209	ENST00000551189	TECPR2	O15040	1411 aa		13.62	□□□□□ -0.23
DDX23-209	ENST00000551189	DISP3	Q9P2K9	1392 aa		13.61	□□□□□ -0.23
DDX23-209	ENST00000551189	DDX10	Q13206	875 aa	Known RBP	13.61	□□□□□ -0.23
DDX23-209	ENST00000551189	PTPRU	Q92729	1446 aa		13.61	□□□□□ -0.23
DDX23-209	ENST00000551189	FAM135B	Q49AJ0	1406 aa		13.6	□□□□□ -0.23
DDX23-209	ENST00000551189	WAPL	Q7Z5K2	1190 aa		13.6	□□□□□ -0.23
DDX23-209	ENST00000551189	SIRT1	Q96EB6	747 aa		13.6	□□□□□ -0.23
DDX23-209	ENST00000551189	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.6	□□□□□ -0.23
DDX23-209	ENST00000551189	EVC2	Q86UK5	1308 aa		13.59	□□□□□ -0.23

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