RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 SLF2Q8IX21 1173 aa12.47□□□□□ -0.41
LETMD1-226ENST00000550755 NECTIN2Q92692 538 aa12.47□□□□□ -0.41
LETMD1-226ENST00000550755 TMEM134Q9H6X4 195 aa12.47□□□□□ -0.41
LETMD1-226ENST00000550755 CCDC102AQ96A19 550 aa12.46□□□□□ -0.41
LETMD1-226ENST00000550755 TSR3Q9UJK0 312 aaKnown RBP12.46□□□□□ -0.41
LETMD1-226ENST00000550755 HPS5Q9UPZ3 1129 aa12.46□□□□□ -0.41
LETMD1-226ENST00000550755 PPP4CP60510 307 aa12.45□□□□□ -0.42
LETMD1-226ENST00000550755 NYAP1Q6ZVC0 841 aa12.42□□□□□ -0.42
LETMD1-226ENST00000550755 RSPH4AQ5TD94 716 aa12.41□□□□□ -0.42
LETMD1-226ENST00000550755 WBP1LQ9NX94 342 aa12.4□□□□□ -0.42
LETMD1-226ENST00000550755 DAXXQ9UER7 740 aaPredicted RBP12.39□□□□□ -0.43
LETMD1-226ENST00000550755 NLRP7Q8WX94 980 aa12.38□□□□□ -0.43
LETMD1-226ENST00000550755 AK7Q96M32 723 aa12.38□□□□□ -0.43
LETMD1-226ENST00000550755 PHOX2BQ99453 314 aa12.38□□□□□ -0.43
LETMD1-226ENST00000550755 SULF1Q8IWU6 871 aa12.36□□□□□ -0.43
LETMD1-226ENST00000550755 MDM2Q00987 491 aaPredicted RBP12.35□□□□□ -0.43
LETMD1-226ENST00000550755 CLCN1P35523 988 aa12.34□□□□□ -0.43
LETMD1-226ENST00000550755 PRR14Q9BWN1 585 aa12.34□□□□□ -0.43
LETMD1-226ENST00000550755 SLC24A3Q9HC58 644 aa12.34□□□□□ -0.43
LETMD1-226ENST00000550755 DDX11L8A8MPP1 907 aa12.33□□□□□ -0.44
LETMD1-226ENST00000550755 RDH13Q8NBN7 331 aa12.33□□□□□ -0.44
LETMD1-226ENST00000550755 TTLL12Q14166 644 aaPredicted RBP12.32□□□□□ -0.44
LETMD1-226ENST00000550755 KMT5BQ4FZB7 885 aa12.31□□□□□ -0.44
LETMD1-226ENST00000550755 GPCPD1Q9NPB8 672 aa12.31□□□□□ -0.44
LETMD1-226ENST00000550755 TRIM66O15016 1216 aa12.29□□□□□ -0.44
LETMD1-226ENST00000550755 AMHR2Q16671 573 aa12.29□□□□□ -0.44
LETMD1-226ENST00000550755 TPRNQ4KMQ1 711 aa12.29□□□□□ -0.44
LETMD1-226ENST00000550755 CFHP08603 1231 aa12.28□□□□□ -0.44
LETMD1-226ENST00000550755 SLC10A3P09131 477 aa12.27□□□□□ -0.45
LETMD1-226ENST00000550755 APLP1P51693 650 aa12.26□□□□□ -0.45
LETMD1-226ENST00000550755 PLA2G2EQ9NZK7 142 aa12.23□□□□□ -0.45
LETMD1-226ENST00000550755 PCDHB3Q9Y5E6 796 aa12.23□□□□□ -0.45
LETMD1-226ENST00000550755 ACTN4O43707 911 aaKnown RBP12.22□□□□□ -0.45
LETMD1-226ENST00000550755 PDE4DQ08499 809 aa12.22□□□□□ -0.45
LETMD1-226ENST00000550755 FAM217BQ9NTX9 383 aaPredicted RBP12.22□□□□□ -0.45
LETMD1-226ENST00000550755 GIGYF2Q6Y7W6 1299 aaKnown RBP12.21□□□□□ -0.45
LETMD1-226ENST00000550755 TMUB1Q9BVT8 246 aa12.21□□□□□ -0.45
LETMD1-226ENST00000550755 CD46P15529 392 aa12.2□□□□□ -0.46
LETMD1-226ENST00000550755 SSTR3P32745 418 aaPredicted RBP12.2□□□□□ -0.46
LETMD1-226ENST00000550755 GCGRP47871 477 aa12.2□□□□□ -0.46
LETMD1-226ENST00000550755 KCNC4Q03721 635 aa12.19□□□□□ -0.46
LETMD1-226ENST00000550755 PARP9Q8IXQ6 854 aa12.19□□□□□ -0.46
LETMD1-226ENST00000550755 REPIN1Q9BWE0 567 aaKnown RBP12.19□□□□□ -0.46
LETMD1-226ENST00000550755 MTRQ99707 1265 aa12.18□□□□□ -0.46
LETMD1-226ENST00000550755 IL21Q9HBE4 155 aa12.18□□□□□ -0.46
LETMD1-226ENST00000550755 ITGBL1O95965 494 aaPredicted RBP12.17□□□□□ -0.46
LETMD1-226ENST00000550755 COPS2P61201 443 aa12.17□□□□□ -0.46
LETMD1-226ENST00000550755 GRIPAP1Q4V328 841 aa12.17□□□□□ -0.46
LETMD1-226ENST00000550755 TJAP1Q5JTD0 557 aa12.15□□□□□ -0.46
LETMD1-226ENST00000550755 KDM4AO75164 1064 aa12.14□□□□□ -0.47
LETMD1-226ENST00000550755 NR1I2O75469 434 aa12.14□□□□□ -0.47
LETMD1-226ENST00000550755 ATP6V1AP38606 617 aa12.14□□□□□ -0.47
LETMD1-226ENST00000550755 FUT2Q10981 343 aa12.14□□□□□ -0.47
LETMD1-226ENST00000550755 NUTM1Q86Y26 1132 aa12.14□□□□□ -0.47
LETMD1-226ENST00000550755 BLOC1S3Q6QNY0 202 aa12.13□□□□□ -0.47
LETMD1-226ENST00000550755 USP46P62068 366 aa12.12□□□□□ -0.47
LETMD1-226ENST00000550755 IFFO2Q5TF58 517 aa12.12□□□□□ -0.47
LETMD1-226ENST00000550755 PUS10Q3MIT2 529 aaKnown RBP12.11□□□□□ -0.47
LETMD1-226ENST00000550755 BEGAINQ9BUH8 593 aa12.11□□□□□ -0.47
LETMD1-226ENST00000550755 ZPR1O75312 459 aa12.1□□□□□ -0.47
LETMD1-226ENST00000550755 MS4A1P11836 297 aa12.08□□□□□ -0.48
LETMD1-226ENST00000550755 DIXDC1Q155Q3 683 aa12.08□□□□□ -0.48
LETMD1-226ENST00000550755 ZNF516Q92618 1163 aa12.08□□□□□ -0.48
LETMD1-226ENST00000550755 MORN1Q5T089 497 aa12.07□□□□□ -0.48
LETMD1-226ENST00000550755 PRKCSHP14314 528 aaPredicted RBP12.06□□□□□ -0.48
LETMD1-226ENST00000550755 SCUBE3Q8IX30 993 aa12.06□□□□□ -0.48
LETMD1-226ENST00000550755 NEUROD2Q15784 382 aa12.05□□□□□ -0.48
LETMD1-226ENST00000550755 KDM4CQ9H3R0 1056 aa12.05□□□□□ -0.48
LETMD1-226ENST00000550755 GPBP1L1Q9HC44 474 aaPredicted RBP12.05□□□□□ -0.48
LETMD1-226ENST00000550755 HOXA2O43364 376 aa12.03□□□□□ -0.48
LETMD1-226ENST00000550755 Q3C1V9 767 aa12.03□□□□□ -0.48
LETMD1-226ENST00000550755 SPIRE2Q8WWL2 714 aa12.03□□□□□ -0.48
LETMD1-226ENST00000550755 SLC27A5Q9Y2P5 690 aa12.03□□□□□ -0.48
LETMD1-226ENST00000550755 FMNL1O95466 1100 aaPredicted RBP12.01□□□□□ -0.49
LETMD1-226ENST00000550755 GGCXP38435 758 aa12.01□□□□□ -0.49
LETMD1-226ENST00000550755 A0A0G2JS52 829 aa12□□□□□ -0.49
LETMD1-226ENST00000550755 NKX2-3Q8TAU0 364 aa12□□□□□ -0.49
LETMD1-226ENST00000550755 DDRGK1Q96HY6 314 aa12□□□□□ -0.49
LETMD1-226ENST00000550755 TBC1D2Q9BYX2 928 aa12□□□□□ -0.49
LETMD1-226ENST00000550755 TLL1O43897 1013 aa11.99□□□□□ -0.49
LETMD1-226ENST00000550755 ADH1BP00325 375 aa11.99□□□□□ -0.49
LETMD1-226ENST00000550755 SPSB2Q99619 263 aa11.99□□□□□ -0.49
LETMD1-226ENST00000550755 SALL2Q9Y467 1007 aaPredicted RBP11.99□□□□□ -0.49
LETMD1-226ENST00000550755 FDX1P10109 184 aa11.98□□□□□ -0.49
LETMD1-226ENST00000550755 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
LETMD1-226ENST00000550755 MOXD2PA6NHM9 499 aa11.96□□□□□ -0.49
LETMD1-226ENST00000550755 HLA-CQ95604 372 aa11.96□□□□□ -0.49
LETMD1-226ENST00000550755 BRPF1P55201 1214 aaPredicted RBP11.95□□□□□ -0.5
LETMD1-226ENST00000550755 GUCA2AQ02747 115 aa11.95□□□□□ -0.5
LETMD1-226ENST00000550755 BRICD5Q6PL45 260 aa11.95□□□□□ -0.5
LETMD1-226ENST00000550755 NDUFV2P19404 249 aa11.94□□□□□ -0.5
LETMD1-226ENST00000550755 THAP11Q96EK4 314 aa11.94□□□□□ -0.5
LETMD1-226ENST00000550755 FAM117AQ9C073 453 aa11.94□□□□□ -0.5
LETMD1-226ENST00000550755 SLC6A16Q9GZN6 736 aa11.94□□□□□ -0.5
LETMD1-226ENST00000550755 GJA5P36382 358 aa11.93□□□□□ -0.5
LETMD1-226ENST00000550755 PPP1R18Q6NYC8 613 aa11.93□□□□□ -0.5
LETMD1-226ENST00000550755 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.93□□□□□ -0.5
LETMD1-226ENST00000550755 RNF19BQ6ZMZ0 732 aa11.92□□□□□ -0.5
LETMD1-226ENST00000550755 RIC3Q7Z5B4 369 aa11.92□□□□□ -0.5
LETMD1-226ENST00000550755 C6orf229H3BNL8 230 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms