RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.82□□□□□ -0.2
AC055716.1-201ENST00000550077 SHPRHQ149N8 1683 aa13.82□□□□□ -0.2
AC055716.1-201ENST00000550077 BCANQ96GW7 911 aa13.81□□□□□ -0.2
AC055716.1-201ENST00000550077 GCC2Q8IWJ2 1684 aa13.81□□□□□ -0.2
AC055716.1-201ENST00000550077 ZFYVE9O95405 1425 aa13.81□□□□□ -0.2
AC055716.1-201ENST00000550077 LMTK2Q8IWU2 1503 aa13.8□□□□□ -0.2
AC055716.1-201ENST00000550077 CHIC2Q9UKJ5 165 aa13.8□□□□□ -0.2
AC055716.1-201ENST00000550077 DIP2AQ14689 1571 aa13.79□□□□□ -0.2
AC055716.1-201ENST00000550077 PTPN23Q9H3S7 1636 aa13.79□□□□□ -0.2
AC055716.1-201ENST00000550077 AHDC1Q5TGY3 1603 aaPredicted RBP13.79□□□□□ -0.2
AC055716.1-201ENST00000550077 NUTM2BA6NNL0 878 aaPredicted RBP13.78□□□□□ -0.2
AC055716.1-201ENST00000550077 NUTM2EB1AL46 878 aaPredicted RBP13.78□□□□□ -0.2
AC055716.1-201ENST00000550077 MEX3CQ5U5Q3 659 aaKnown RBP13.78□□□□□ -0.2
AC055716.1-201ENST00000550077 NUTM2DQ5VT03 806 aaPredicted RBP13.78□□□□□ -0.2
AC055716.1-201ENST00000550077 NUTM2AQ8IVF1 878 aaPredicted RBP13.78□□□□□ -0.2
AC055716.1-201ENST00000550077 DAPK1P53355 1430 aa13.78□□□□□ -0.2
AC055716.1-201ENST00000550077 TMEM131LA2VDJ0 1609 aa13.77□□□□□ -0.21
AC055716.1-201ENST00000550077 SPATA31A6Q5VVP1 1343 aa13.77□□□□□ -0.21
AC055716.1-201ENST00000550077 ZNF772Q68DY9 489 aaPredicted RBP13.77□□□□□ -0.21
AC055716.1-201ENST00000550077 VPS8Q8N3P4 1428 aa13.77□□□□□ -0.21
AC055716.1-201ENST00000550077 FGD6Q6ZV73 1430 aa13.76□□□□□ -0.21
AC055716.1-201ENST00000550077 KANK1Q14678 1352 aa13.76□□□□□ -0.21
AC055716.1-201ENST00000550077 RXRBP28702 533 aa13.76□□□□□ -0.21
AC055716.1-201ENST00000550077 RIMS2Q9UQ26 1411 aa13.75□□□□□ -0.21
AC055716.1-201ENST00000550077 PLEKHG1Q9ULL1 1385 aa13.75□□□□□ -0.21
AC055716.1-201ENST00000550077 ADAMTS13Q76LX8 1427 aa13.74□□□□□ -0.21
AC055716.1-201ENST00000550077 LOC105371045A0A1W2PR82 267 aa13.74□□□□□ -0.21
AC055716.1-201ENST00000550077 AFF2P51816 1311 aa13.73□□□□□ -0.21
AC055716.1-201ENST00000550077 BRINP3Q76B58 766 aa13.73□□□□□ -0.21
AC055716.1-201ENST00000550077 C14orf37Q86TY3 774 aa13.73□□□□□ -0.21
AC055716.1-201ENST00000550077 RGS12O14924 1447 aa13.73□□□□□ -0.21
AC055716.1-201ENST00000550077 PTPRUQ92729 1446 aa13.73□□□□□ -0.21
AC055716.1-201ENST00000550077 DDX17Q92841 729 aaKnown RBP13.72□□□□□ -0.21
AC055716.1-201ENST00000550077 SLC52A1Q9NWF4 448 aa13.72□□□□□ -0.21
AC055716.1-201ENST00000550077 TBX22Q9Y458 520 aa13.72□□□□□ -0.21
AC055716.1-201ENST00000550077 CDK12Q9NYV4 1490 aaPredicted RBP13.7□□□□□ -0.22
AC055716.1-201ENST00000550077 PPP1R15AO75807 674 aaPredicted RBP13.7□□□□□ -0.22
AC055716.1-201ENST00000550077 C19orf44Q9H6X5 657 aa13.7□□□□□ -0.22
AC055716.1-201ENST00000550077 NHSL1Q5SYE7 1610 aa13.7□□□□□ -0.22
AC055716.1-201ENST00000550077 NCOA3Q9Y6Q9 1424 aa13.69□□□□□ -0.22
AC055716.1-201ENST00000550077 ATF3P18847 181 aa13.68□□□□□ -0.22
AC055716.1-201ENST00000550077 CADPS2Q86UW7 1296 aa13.68□□□□□ -0.22
AC055716.1-201ENST00000550077 E9PCH4 1651 aa13.68□□□□□ -0.22
AC055716.1-201ENST00000550077 ASXL1Q8IXJ9 1541 aa13.68□□□□□ -0.22
AC055716.1-201ENST00000550077 ANKRD30AQ9BXX3 1397 aa13.68□□□□□ -0.22
AC055716.1-201ENST00000550077 CHGAP10645 457 aaKnown RBP13.67□□□□□ -0.22
AC055716.1-201ENST00000550077 C8orf37Q96NL8 207 aa13.67□□□□□ -0.22
AC055716.1-201ENST00000550077 QTRT2Q9H974 415 aaKnown RBP13.67□□□□□ -0.22
AC055716.1-201ENST00000550077 AMOTL2Q9Y2J4 779 aa13.67□□□□□ -0.22
AC055716.1-201ENST00000550077 NRXN3Q9Y4C0 1643 aa13.66□□□□□ -0.22
AC055716.1-201ENST00000550077 UNC13BO14795 1591 aa13.66□□□□□ -0.22
AC055716.1-201ENST00000550077 MST1RQ04912 1400 aa13.65□□□□□ -0.22
AC055716.1-201ENST00000550077 SETD5Q9C0A6 1442 aa13.65□□□□□ -0.22
AC055716.1-201ENST00000550077 RPRD2Q5VT52 1461 aaKnown RBP13.65□□□□□ -0.22
AC055716.1-201ENST00000550077 SETBP1Q9Y6X0 1596 aa13.65□□□□□ -0.22
AC055716.1-201ENST00000550077 XRN1Q8IZH2 1706 aaKnown RBP13.64□□□□□ -0.23
AC055716.1-201ENST00000550077 ADGRL2O95490 1459 aa13.63□□□□□ -0.23
AC055716.1-201ENST00000550077 PNPLA6Q8IY17 1366 aa13.63□□□□□ -0.23
AC055716.1-201ENST00000550077 TRPM2O94759 1503 aa13.63□□□□□ -0.23
AC055716.1-201ENST00000550077 RBM6P78332 1123 aaKnown RBP13.62□□□□□ -0.23
AC055716.1-201ENST00000550077 NALCNQ8IZF0 1738 aa13.61□□□□□ -0.23
AC055716.1-201ENST00000550077 ADAMTS2O95450 1211 aa13.61□□□□□ -0.23
AC055716.1-201ENST00000550077 ANKRD50Q9ULJ7 1429 aa13.61□□□□□ -0.23
AC055716.1-201ENST00000550077 PIK3R4Q99570 1358 aa13.6□□□□□ -0.23
AC055716.1-201ENST00000550077 HDGFP51858 240 aaKnown RBP13.6□□□□□ -0.23
AC055716.1-201ENST00000550077 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.6□□□□□ -0.23
AC055716.1-201ENST00000550077 SRCAPQ6ZRS2 3230 aa13.6□□□□□ -0.23
AC055716.1-201ENST00000550077 METP08581 1390 aa13.59□□□□□ -0.23
AC055716.1-201ENST00000550077 LRRC59Q96AG4 307 aaKnown RBP13.59□□□□□ -0.23
AC055716.1-201ENST00000550077 NGLY1Q96IV0 654 aa13.58□□□□□ -0.24
AC055716.1-201ENST00000550077 DCCP43146 1447 aa13.57□□□□□ -0.24
AC055716.1-201ENST00000550077 FAM50AQ14320 339 aaKnown RBP13.56□□□□□ -0.24
AC055716.1-201ENST00000550077 IQGAP3Q86VI3 1631 aa13.55□□□□□ -0.24
AC055716.1-201ENST00000550077 LAMC1P11047 1609 aa13.54□□□□□ -0.24
AC055716.1-201ENST00000550077 ORAI2Q96SN7 254 aa13.54□□□□□ -0.24
AC055716.1-201ENST00000550077 USP21Q9UK80 565 aa13.54□□□□□ -0.24
AC055716.1-201ENST00000550077 ATAD2Q6PL18 1390 aa13.54□□□□□ -0.24
AC055716.1-201ENST00000550077 ADGRL3Q9HAR2 1447 aa13.54□□□□□ -0.24
AC055716.1-201ENST00000550077 ZRANB1Q9UGI0 708 aa13.52□□□□□ -0.25
AC055716.1-201ENST00000550077 C1orf167Q5SNV9 1468 aa13.52□□□□□ -0.25
AC055716.1-201ENST00000550077 ATRNO75882 1429 aa13.51□□□□□ -0.25
AC055716.1-201ENST00000550077 MARF1Q9Y4F3 1742 aaKnown RBP13.5□□□□□ -0.25
AC055716.1-201ENST00000550077 SOS2Q07890 1332 aaPredicted RBP13.5□□□□□ -0.25
AC055716.1-201ENST00000550077 FNBP4Q8N3X1 1017 aaPredicted RBP13.5□□□□□ -0.25
AC055716.1-201ENST00000550077 BRWD3Q6RI45 1802 aa13.5□□□□□ -0.25
AC055716.1-201ENST00000550077 SPHKAPQ2M3C7 1700 aa13.5□□□□□ -0.25
AC055716.1-201ENST00000550077 BCL9LQ86UU0 1499 aa13.49□□□□□ -0.25
AC055716.1-201ENST00000550077 APLP2Q06481 763 aa13.49□□□□□ -0.25
AC055716.1-201ENST00000550077 TRPC5Q9UL62 973 aaPredicted RBP13.49□□□□□ -0.25
AC055716.1-201ENST00000550077 EP400Q96L91 3159 aa13.49□□□□□ -0.25
AC055716.1-201ENST00000550077 COL22A1Q8NFW1 1626 aaPredicted RBP13.49□□□□□ -0.25
AC055716.1-201ENST00000550077 NEXMIFQ5QGS0 1516 aa13.49□□□□□ -0.25
AC055716.1-201ENST00000550077 NUP155O75694 1391 aa13.47□□□□□ -0.25
AC055716.1-201ENST00000550077 CLTCL1P53675 1640 aa13.47□□□□□ -0.25
AC055716.1-201ENST00000550077 ROBO2Q9HCK4 1378 aa13.46□□□□□ -0.25
AC055716.1-201ENST00000550077 ZNF326Q5BKZ1 582 aaKnown RBP13.46□□□□□ -0.25
AC055716.1-201ENST00000550077 GLI3P10071 1580 aa13.45□□□□□ -0.26
AC055716.1-201ENST00000550077 MYOM2P54296 1465 aa13.45□□□□□ -0.26
AC055716.1-201ENST00000550077 XPCQ01831 940 aaPredicted RBP13.45□□□□□ -0.26
AC055716.1-201ENST00000550077 DEFB132Q7Z7B7 95 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms