RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 CCDC102AQ96A19 550 aa11.42□□□□□ -0.58
UBE2N-204ENST00000549833 FAM161AQ3B820 660 aa11.41□□□□□ -0.58
UBE2N-204ENST00000549833 C3orf80F5H4A9 247 aa11.4□□□□□ -0.58
UBE2N-204ENST00000549833 IRF6O14896 467 aa11.4□□□□□ -0.58
UBE2N-204ENST00000549833 METTL3Q86U44 580 aaKnown RBP11.4□□□□□ -0.58
UBE2N-204ENST00000549833 PXYLP1Q8TE99 480 aa11.4□□□□□ -0.58
UBE2N-204ENST00000549833 PRDM2Q13029 1718 aa11.39□□□□□ -0.59
UBE2N-204ENST00000549833 SPNS2Q8IVW8 549 aa11.39□□□□□ -0.59
UBE2N-204ENST00000549833 EYA1Q99502 592 aa11.39□□□□□ -0.59
UBE2N-204ENST00000549833 MYT1LQ9UL68 1186 aa11.39□□□□□ -0.59
UBE2N-204ENST00000549833 DNAJB2P25686 324 aa11.38□□□□□ -0.59
UBE2N-204ENST00000549833 NESP48681 1621 aa11.38□□□□□ -0.59
UBE2N-204ENST00000549833 CCDC88BA6NC98 1476 aa11.38□□□□□ -0.59
UBE2N-204ENST00000549833 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.37□□□□□ -0.59
UBE2N-204ENST00000549833 ZFRQ96KR1 1074 aaKnown RBP11.37□□□□□ -0.59
UBE2N-204ENST00000549833 ANKK1Q8NFD2 765 aa11.36□□□□□ -0.59
UBE2N-204ENST00000549833 AK7Q96M32 723 aa11.36□□□□□ -0.59
UBE2N-204ENST00000549833 SLC24A3Q9HC58 644 aa11.36□□□□□ -0.59
UBE2N-204ENST00000549833 HDGFP51858 240 aaKnown RBP11.35□□□□□ -0.59
UBE2N-204ENST00000549833 LAMC3Q9Y6N6 1575 aa11.34□□□□□ -0.59
UBE2N-204ENST00000549833 RCCD1A6NED2 376 aa11.34□□□□□ -0.59
UBE2N-204ENST00000549833 WNT2BQ93097 391 aa11.34□□□□□ -0.59
UBE2N-204ENST00000549833 KIF21AQ7Z4S6 1674 aa11.33□□□□□ -0.6
UBE2N-204ENST00000549833 SLC4A3P48751 1232 aa11.32□□□□□ -0.6
UBE2N-204ENST00000549833 RNF166Q96A37 237 aaPredicted RBP11.32□□□□□ -0.6
UBE2N-204ENST00000549833 KCTD12Q96CX2 325 aaKnown RBP11.32□□□□□ -0.6
UBE2N-204ENST00000549833 LRCH3Q96II8 777 aa11.32□□□□□ -0.6
UBE2N-204ENST00000549833 TMEM134Q9H6X4 195 aa11.32□□□□□ -0.6
UBE2N-204ENST00000549833 SAMD7Q7Z3H4 446 aa11.31□□□□□ -0.6
UBE2N-204ENST00000549833 SWT1Q5T5J6 900 aaKnown RBP11.3□□□□□ -0.6
UBE2N-204ENST00000549833 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.3□□□□□ -0.6
UBE2N-204ENST00000549833 CADPSQ9ULU8 1353 aa11.29□□□□□ -0.6
UBE2N-204ENST00000549833 PHOX2BQ99453 314 aa11.29□□□□□ -0.6
UBE2N-204ENST00000549833 SOWAHBA6NEL2 793 aa11.28□□□□□ -0.6
UBE2N-204ENST00000549833 TRIM66O15016 1216 aa11.28□□□□□ -0.6
UBE2N-204ENST00000549833 RNF40O75150 1001 aa11.28□□□□□ -0.6
UBE2N-204ENST00000549833 THSD4Q6ZMP0 1018 aa11.28□□□□□ -0.6
UBE2N-204ENST00000549833 SLF2Q8IX21 1173 aa11.28□□□□□ -0.6
UBE2N-204ENST00000549833 PLSCR2Q9NRY7 297 aa11.28□□□□□ -0.6
UBE2N-204ENST00000549833 MMRN1Q13201 1228 aa11.27□□□□□ -0.61
UBE2N-204ENST00000549833 AMHR2Q16671 573 aa11.27□□□□□ -0.61
UBE2N-204ENST00000549833 NECTIN2Q92692 538 aa11.27□□□□□ -0.61
UBE2N-204ENST00000549833 CFTRP13569 1480 aa11.26□□□□□ -0.61
UBE2N-204ENST00000549833 CLCN1P35523 988 aa11.26□□□□□ -0.61
UBE2N-204ENST00000549833 BCAMP50895 628 aa11.26□□□□□ -0.61
UBE2N-204ENST00000549833 MDM2Q00987 491 aaPredicted RBP11.26□□□□□ -0.61
UBE2N-204ENST00000549833 TTLL12Q14166 644 aaPredicted RBP11.26□□□□□ -0.61
UBE2N-204ENST00000549833 NLRP7Q8WX94 980 aa11.26□□□□□ -0.61
UBE2N-204ENST00000549833 GPCPD1Q9NPB8 672 aa11.25□□□□□ -0.61
UBE2N-204ENST00000549833 DAXXQ9UER7 740 aaPredicted RBP11.25□□□□□ -0.61
UBE2N-204ENST00000549833 HPS5Q9UPZ3 1129 aa11.24□□□□□ -0.61
UBE2N-204ENST00000549833 SULF1Q8IWU6 871 aa11.23□□□□□ -0.61
UBE2N-204ENST00000549833 ERCC6Q03468 1493 aa11.23□□□□□ -0.61
UBE2N-204ENST00000549833 PDE4DQ08499 809 aa11.22□□□□□ -0.61
UBE2N-204ENST00000549833 TSR3Q9UJK0 312 aaKnown RBP11.22□□□□□ -0.61
UBE2N-204ENST00000549833 RSPH4AQ5TD94 716 aa11.21□□□□□ -0.61
UBE2N-204ENST00000549833 PDS5BQ9NTI5 1447 aa11.2□□□□□ -0.62
UBE2N-204ENST00000549833 PTPN5P54829 565 aa11.2□□□□□ -0.62
UBE2N-204ENST00000549833 FANCD2Q9BXW9 1451 aa11.19□□□□□ -0.62
UBE2N-204ENST00000549833 DDX11L8A8MPP1 907 aa11.19□□□□□ -0.62
UBE2N-204ENST00000549833 PPP4CP60510 307 aa11.19□□□□□ -0.62
UBE2N-204ENST00000549833 PARP9Q8IXQ6 854 aa11.19□□□□□ -0.62
UBE2N-204ENST00000549833 RDH13Q8NBN7 331 aa11.19□□□□□ -0.62
UBE2N-204ENST00000549833 THOC2Q8NI27 1593 aaKnown RBP11.19□□□□□ -0.62
UBE2N-204ENST00000549833 GIGYF2Q6Y7W6 1299 aaKnown RBP11.18□□□□□ -0.62
UBE2N-204ENST00000549833 NYAP1Q6ZVC0 841 aa11.18□□□□□ -0.62
UBE2N-204ENST00000549833 TMUB1Q9BVT8 246 aa11.18□□□□□ -0.62
UBE2N-204ENST00000549833 HCSTQ9UBK5 93 aa11.18□□□□□ -0.62
UBE2N-204ENST00000549833 FAM217BQ9NTX9 383 aaPredicted RBP11.17□□□□□ -0.62
UBE2N-204ENST00000549833 CEP164Q9UPV0 1460 aa11.17□□□□□ -0.62
UBE2N-204ENST00000549833 REPIN1Q9BWE0 567 aaKnown RBP11.16□□□□□ -0.62
UBE2N-204ENST00000549833 PRR14Q9BWN1 585 aa11.16□□□□□ -0.62
UBE2N-204ENST00000549833 WBP1LQ9NX94 342 aa11.16□□□□□ -0.62
UBE2N-204ENST00000549833 KMT5BQ4FZB7 885 aa11.15□□□□□ -0.62
UBE2N-204ENST00000549833 CFHP08603 1231 aa11.14□□□□□ -0.63
UBE2N-204ENST00000549833 SLC10A3P09131 477 aa11.13□□□□□ -0.63
UBE2N-204ENST00000549833 CD46P15529 392 aa11.13□□□□□ -0.63
UBE2N-204ENST00000549833 MRC2Q9UBG0 1479 aa11.12□□□□□ -0.63
UBE2N-204ENST00000549833 SSTR3P32745 418 aaPredicted RBP11.12□□□□□ -0.63
UBE2N-204ENST00000549833 NEUROD2Q15784 382 aa11.11□□□□□ -0.63
UBE2N-204ENST00000549833 WDR62O43379 1518 aa11.09□□□□□ -0.63
UBE2N-204ENST00000549833 URB2Q14146 1524 aaKnown RBP11.09□□□□□ -0.63
UBE2N-204ENST00000549833 KDM4CQ9H3R0 1056 aa11.09□□□□□ -0.63
UBE2N-204ENST00000549833 GPBP1L1Q9HC44 474 aaPredicted RBP11.09□□□□□ -0.63
UBE2N-204ENST00000549833 APLP1P51693 650 aa11.08□□□□□ -0.64
UBE2N-204ENST00000549833 MS4A1P11836 297 aa11.07□□□□□ -0.64
UBE2N-204ENST00000549833 GCGRP47871 477 aa11.07□□□□□ -0.64
UBE2N-204ENST00000549833 BRPF1P55201 1214 aaPredicted RBP11.07□□□□□ -0.64
UBE2N-204ENST00000549833 ACTN4O43707 911 aaKnown RBP11.06□□□□□ -0.64
UBE2N-204ENST00000549833 ABCC8Q09428 1581 aa11.06□□□□□ -0.64
UBE2N-204ENST00000549833 DNMBPQ6XZF7 1577 aa11.06□□□□□ -0.64
UBE2N-204ENST00000549833 BEGAINQ9BUH8 593 aa11.05□□□□□ -0.64
UBE2N-204ENST00000549833 PCDHB3Q9Y5E6 796 aa11.05□□□□□ -0.64
UBE2N-204ENST00000549833 TOPBP1Q92547 1522 aa11.04□□□□□ -0.64
UBE2N-204ENST00000549833 NUTM1Q86Y26 1132 aa11.04□□□□□ -0.64
UBE2N-204ENST00000549833 CUX2O14529 1486 aa11.04□□□□□ -0.64
UBE2N-204ENST00000549833 CUX1P39880 1505 aa11.04□□□□□ -0.64
UBE2N-204ENST00000549833 KDM4AO75164 1064 aa11.02□□□□□ -0.65
UBE2N-204ENST00000549833 USP46P62068 366 aa11.02□□□□□ -0.65
UBE2N-204ENST00000549833 GRIPAP1Q4V328 841 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms