RNA–Protein interactions for RNA: ENST00000549527.1

AC027288.3-201, humanhuman

TSL 2

Gene AC027288.3, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027288.3-201ENST00000549527 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
AC027288.3-201ENST00000549527 NRXN3Q9Y4C0 1643 aa13.53□□□□□ -0.24
AC027288.3-201ENST00000549527 PHLPP1O60346 1717 aa13.53□□□□□ -0.24
AC027288.3-201ENST00000549527 CLTCL1P53675 1640 aa13.53□□□□□ -0.24
AC027288.3-201ENST00000549527 KIF1BO60333 1816 aa13.53□□□□□ -0.24
AC027288.3-201ENST00000549527 ROCK1Q13464 1354 aa13.52□□□□□ -0.25
AC027288.3-201ENST00000549527 XRN1Q8IZH2 1706 aaKnown RBP13.51□□□□□ -0.25
AC027288.3-201ENST00000549527 IDI1Q13907 227 aa13.51□□□□□ -0.25
AC027288.3-201ENST00000549527 EID1Q9Y6B2 187 aa13.51□□□□□ -0.25
AC027288.3-201ENST00000549527 RIMS2Q9UQ26 1411 aa13.5□□□□□ -0.25
AC027288.3-201ENST00000549527 TMEM94Q12767 1356 aa13.49□□□□□ -0.25
AC027288.3-201ENST00000549527 SOCS7O14512 581 aa13.49□□□□□ -0.25
AC027288.3-201ENST00000549527 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.49□□□□□ -0.25
AC027288.3-201ENST00000549527 SETD1AO15047 1707 aaKnown RBP13.47□□□□□ -0.25
AC027288.3-201ENST00000549527 NALCNQ8IZF0 1738 aa13.47□□□□□ -0.25
AC027288.3-201ENST00000549527 PLEKHG1Q9ULL1 1385 aa13.47□□□□□ -0.25
AC027288.3-201ENST00000549527 PPARGC1BQ86YN6 1023 aaKnown RBP13.47□□□□□ -0.25
AC027288.3-201ENST00000549527 SLC26A8Q96RN1 970 aa13.47□□□□□ -0.25
AC027288.3-201ENST00000549527 TRPM2O94759 1503 aa13.47□□□□□ -0.25
AC027288.3-201ENST00000549527 COL16A1Q07092 1604 aaPredicted RBP13.46□□□□□ -0.25
AC027288.3-201ENST00000549527 ITGAEP38570 1179 aa13.46□□□□□ -0.25
AC027288.3-201ENST00000549527 SETBP1Q9Y6X0 1596 aa13.45□□□□□ -0.26
AC027288.3-201ENST00000549527 RBM33Q96EV2 1170 aaKnown RBP13.44□□□□□ -0.26
AC027288.3-201ENST00000549527 SLC52A1Q9NWF4 448 aa13.44□□□□□ -0.26
AC027288.3-201ENST00000549527 ADAMTS13Q76LX8 1427 aa13.44□□□□□ -0.26
AC027288.3-201ENST00000549527 RRBP1Q9P2E9 1410 aaKnown RBP13.44□□□□□ -0.26
AC027288.3-201ENST00000549527 NEXMIFQ5QGS0 1516 aa13.44□□□□□ -0.26
AC027288.3-201ENST00000549527 PPLO60437 1756 aa13.43□□□□□ -0.26
AC027288.3-201ENST00000549527 NUP155O75694 1391 aa13.43□□□□□ -0.26
AC027288.3-201ENST00000549527 PPP1R15AO75807 674 aaPredicted RBP13.42□□□□□ -0.26
AC027288.3-201ENST00000549527 SHPRHQ149N8 1683 aa13.42□□□□□ -0.26
AC027288.3-201ENST00000549527 PHF23Q9BUL5 403 aaPredicted RBP13.41□□□□□ -0.26
AC027288.3-201ENST00000549527 MSH6P52701 1360 aa13.41□□□□□ -0.26
AC027288.3-201ENST00000549527 FAM135BQ49AJ0 1406 aa13.4□□□□□ -0.26
AC027288.3-201ENST00000549527 NHSL1Q5SYE7 1610 aa13.4□□□□□ -0.26
AC027288.3-201ENST00000549527 CHGAP10645 457 aaKnown RBP13.4□□□□□ -0.26
AC027288.3-201ENST00000549527 KCNA6P17658 529 aa13.4□□□□□ -0.26
AC027288.3-201ENST00000549527 BCANQ96GW7 911 aa13.4□□□□□ -0.26
AC027288.3-201ENST00000549527 AHDC1Q5TGY3 1603 aaPredicted RBP13.39□□□□□ -0.27
AC027288.3-201ENST00000549527 IFT172Q9UG01 1749 aa13.39□□□□□ -0.27
AC027288.3-201ENST00000549527 NUTM2DQ5VT03 806 aaPredicted RBP13.39□□□□□ -0.27
AC027288.3-201ENST00000549527 NAIPQ13075 1403 aa13.39□□□□□ -0.27
AC027288.3-201ENST00000549527 PROSER2Q86WR7 435 aaPredicted RBP13.37□□□□□ -0.27
AC027288.3-201ENST00000549527 PTPRUQ92729 1446 aa13.37□□□□□ -0.27
AC027288.3-201ENST00000549527 HFM1A2PYH4 1435 aa13.34□□□□□ -0.27
AC027288.3-201ENST00000549527 LRP6O75581 1613 aa13.34□□□□□ -0.27
AC027288.3-201ENST00000549527 ASXL1Q8IXJ9 1541 aa13.34□□□□□ -0.27
AC027288.3-201ENST00000549527 PIK3R4Q99570 1358 aa13.33□□□□□ -0.27
AC027288.3-201ENST00000549527 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.32□□□□□ -0.28
AC027288.3-201ENST00000549527 DCCP43146 1447 aa13.3□□□□□ -0.28
AC027288.3-201ENST00000549527 NCOA3Q9Y6Q9 1424 aa13.3□□□□□ -0.28
AC027288.3-201ENST00000549527 KNDC1Q76NI1 1749 aa13.3□□□□□ -0.28
AC027288.3-201ENST00000549527 C14orf37Q86TY3 774 aa13.3□□□□□ -0.28
AC027288.3-201ENST00000549527 TBX22Q9Y458 520 aa13.29□□□□□ -0.28
AC027288.3-201ENST00000549527 ADGRL3Q9HAR2 1447 aa13.29□□□□□ -0.28
AC027288.3-201ENST00000549527 HDGFP51858 240 aaKnown RBP13.28□□□□□ -0.28
AC027288.3-201ENST00000549527 METP08581 1390 aa13.28□□□□□ -0.28
AC027288.3-201ENST00000549527 MST1RQ04912 1400 aa13.28□□□□□ -0.28
AC027288.3-201ENST00000549527 LAMC1P11047 1609 aa13.28□□□□□ -0.28
AC027288.3-201ENST00000549527 ZNF326Q5BKZ1 582 aaKnown RBP13.27□□□□□ -0.29
AC027288.3-201ENST00000549527 RGS17Q9UGC6 210 aaPredicted RBP13.27□□□□□ -0.29
AC027288.3-201ENST00000549527 JCADQ9P266 1359 aa13.27□□□□□ -0.29
AC027288.3-201ENST00000549527 PTCH1Q13635 1447 aa13.26□□□□□ -0.29
AC027288.3-201ENST00000549527 SLAIN2Q9P270 581 aa13.25□□□□□ -0.29
AC027288.3-201ENST00000549527 CDC42BPGQ6DT37 1551 aa13.24□□□□□ -0.29
AC027288.3-201ENST00000549527 AMOTL2Q9Y2J4 779 aa13.24□□□□□ -0.29
AC027288.3-201ENST00000549527 MARF1Q9Y4F3 1742 aaKnown RBP13.24□□□□□ -0.29
AC027288.3-201ENST00000549527 PRAG1Q86YV5 1406 aa13.22□□□□□ -0.29
AC027288.3-201ENST00000549527 CADPS2Q86UW7 1296 aa13.22□□□□□ -0.29
AC027288.3-201ENST00000549527 RGPD8O14715 1765 aaPredicted RBP13.22□□□□□ -0.29
AC027288.3-201ENST00000549527 FMN2Q9NZ56 1722 aa13.22□□□□□ -0.29
AC027288.3-201ENST00000549527 ATF3P18847 181 aa13.21□□□□□ -0.29
AC027288.3-201ENST00000549527 POTEAQ6S8J7 498 aa13.21□□□□□ -0.29
AC027288.3-201ENST00000549527 BRINP3Q76B58 766 aa13.2□□□□□ -0.3
AC027288.3-201ENST00000549527 TRIM52Q96A61 297 aa13.2□□□□□ -0.3
AC027288.3-201ENST00000549527 C19orf44Q9H6X5 657 aa13.2□□□□□ -0.3
AC027288.3-201ENST00000549527 COL22A1Q8NFW1 1626 aaPredicted RBP13.19□□□□□ -0.3
AC027288.3-201ENST00000549527 CCDC144AA2RUR9 1427 aa13.19□□□□□ -0.3
AC027288.3-201ENST00000549527 ROBO2Q9HCK4 1378 aa13.19□□□□□ -0.3
AC027288.3-201ENST00000549527 ABCA3Q99758 1704 aa13.18□□□□□ -0.3
AC027288.3-201ENST00000549527 SETD5Q9C0A6 1442 aa13.17□□□□□ -0.3
AC027288.3-201ENST00000549527 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
AC027288.3-201ENST00000549527 KIF1AQ12756 1690 aa13.17□□□□□ -0.3
AC027288.3-201ENST00000549527 C1orf167Q5SNV9 1468 aa13.16□□□□□ -0.3
AC027288.3-201ENST00000549527 SPATA31A6Q5VVP1 1343 aa13.16□□□□□ -0.3
AC027288.3-201ENST00000549527 SPATA31E1Q6ZUB1 1445 aa13.16□□□□□ -0.3
AC027288.3-201ENST00000549527 FOXD1Q16676 465 aa13.16□□□□□ -0.3
AC027288.3-201ENST00000549527 MEX3CQ5U5Q3 659 aaKnown RBP13.15□□□□□ -0.3
AC027288.3-201ENST00000549527 PNPLA6Q8IY17 1366 aa13.15□□□□□ -0.3
AC027288.3-201ENST00000549527 PIK3C2GO75747 1445 aa13.14□□□□□ -0.31
AC027288.3-201ENST00000549527 DDX17Q92841 729 aaKnown RBP13.13□□□□□ -0.31
AC027288.3-201ENST00000549527 TECPR2O15040 1411 aa13.12□□□□□ -0.31
AC027288.3-201ENST00000549527 MYOM2P54296 1465 aa13.11□□□□□ -0.31
AC027288.3-201ENST00000549527 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.11□□□□□ -0.31
AC027288.3-201ENST00000549527 PLCH1Q4KWH8 1693 aa13.1□□□□□ -0.31
AC027288.3-201ENST00000549527 NUTM2BA6NNL0 878 aaPredicted RBP13.1□□□□□ -0.31
AC027288.3-201ENST00000549527 NUTM2EB1AL46 878 aaPredicted RBP13.1□□□□□ -0.31
AC027288.3-201ENST00000549527 NUTM2AQ8IVF1 878 aaPredicted RBP13.1□□□□□ -0.31
AC027288.3-201ENST00000549527 PXDNQ92626 1479 aa13.1□□□□□ -0.31
AC027288.3-201ENST00000549527 USP32Q8NFA0 1604 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms