RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 RIMS2Q9UQ26 1411 aa14.53□□□□□ -0.08
GCN1-205ENST00000548821 MSH6P52701 1360 aa14.53□□□□□ -0.08
GCN1-205ENST00000548821 ACIN1Q9UKV3 1341 aaKnown RBP14.53□□□□□ -0.08
GCN1-205ENST00000548821 FAM135BQ49AJ0 1406 aa14.52□□□□□ -0.08
GCN1-205ENST00000548821 NCOA3Q9Y6Q9 1424 aa14.52□□□□□ -0.08
GCN1-205ENST00000548821 TMEM94Q12767 1356 aa14.52□□□□□ -0.08
GCN1-205ENST00000548821 ILDR2Q71H61 639 aa14.52□□□□□ -0.09
GCN1-205ENST00000548821 PIK3R4Q99570 1358 aa14.51□□□□□ -0.09
GCN1-205ENST00000548821 C14orf37Q86TY3 774 aa14.51□□□□□ -0.09
GCN1-205ENST00000548821 NKTRP30414 1462 aaKnown RBP14.5□□□□□ -0.09
GCN1-205ENST00000548821 ZNF326Q5BKZ1 582 aaKnown RBP14.5□□□□□ -0.09
GCN1-205ENST00000548821 UNC13BO14795 1591 aa14.5□□□□□ -0.09
GCN1-205ENST00000548821 GCC2Q8IWJ2 1684 aa14.49□□□□□ -0.09
GCN1-205ENST00000548821 PPARGC1BQ86YN6 1023 aaKnown RBP14.49□□□□□ -0.09
GCN1-205ENST00000548821 CADPS2Q86UW7 1296 aa14.48□□□□□ -0.09
GCN1-205ENST00000548821 SLAIN2Q9P270 581 aa14.48□□□□□ -0.09
GCN1-205ENST00000548821 ZFYVE9O95405 1425 aa14.48□□□□□ -0.09
GCN1-205ENST00000548821 ATF3P18847 181 aa14.47□□□□□ -0.09
GCN1-205ENST00000548821 C19orf44Q9H6X5 657 aa14.47□□□□□ -0.09
GCN1-205ENST00000548821 IQGAP3Q86VI3 1631 aa14.46□□□□□ -0.09
GCN1-205ENST00000548821 TRIM52Q96A61 297 aa14.46□□□□□ -0.09
GCN1-205ENST00000548821 SENP3Q9H4L4 574 aaPredicted RBP14.45□□□□□ -0.1
GCN1-205ENST00000548821 RRBP1Q9P2E9 1410 aaKnown RBP14.45□□□□□ -0.1
GCN1-205ENST00000548821 VGFO15240 615 aaPredicted RBP14.44□□□□□ -0.1
GCN1-205ENST00000548821 TMEM131LA2VDJ0 1609 aa14.44□□□□□ -0.1
GCN1-205ENST00000548821 STRCP1A6NGW2 1772 aa14.43□□□□□ -0.1
GCN1-205ENST00000548821 DIP2AQ14689 1571 aa14.43□□□□□ -0.1
GCN1-205ENST00000548821 AMOTL2Q9Y2J4 779 aa14.42□□□□□ -0.1
GCN1-205ENST00000548821 MED1Q15648 1581 aaPredicted RBP14.42□□□□□ -0.1
GCN1-205ENST00000548821 NUTM2DQ5VT03 806 aaPredicted RBP14.41□□□□□ -0.1
GCN1-205ENST00000548821 SLC4A1APQ9BWU0 796 aaKnown RBP14.41□□□□□ -0.1
GCN1-205ENST00000548821 NWD1Q149M9 1564 aa14.41□□□□□ -0.1
GCN1-205ENST00000548821 RPGRIP1LQ68CZ1 1315 aa14.41□□□□□ -0.1
GCN1-205ENST00000548821 E9PCH4 1651 aa14.4□□□□□ -0.1
GCN1-205ENST00000548821 RBM33Q96EV2 1170 aaKnown RBP14.39□□□□□ -0.11
GCN1-205ENST00000548821 ALKQ9UM73 1620 aa14.39□□□□□ -0.11
GCN1-205ENST00000548821 TRPM2O94759 1503 aa14.39□□□□□ -0.11
GCN1-205ENST00000548821 NAIPQ13075 1403 aa14.38□□□□□ -0.11
GCN1-205ENST00000548821 JCADQ9P266 1359 aa14.37□□□□□ -0.11
GCN1-205ENST00000548821 HFM1A2PYH4 1435 aa14.37□□□□□ -0.11
GCN1-205ENST00000548821 ADAMTS13Q76LX8 1427 aa14.36□□□□□ -0.11
GCN1-205ENST00000548821 CHD2O14647 1828 aaKnown RBP14.35□□□□□ -0.11
GCN1-205ENST00000548821 SPATA31A6Q5VVP1 1343 aa14.35□□□□□ -0.11
GCN1-205ENST00000548821 DCCP43146 1447 aa14.33□□□□□ -0.11
GCN1-205ENST00000548821 MEX3CQ5U5Q3 659 aaKnown RBP14.33□□□□□ -0.12
GCN1-205ENST00000548821 ROBO1Q9Y6N7 1651 aa14.32□□□□□ -0.12
GCN1-205ENST00000548821 XIRP1Q702N8 1843 aaKnown RBP14.31□□□□□ -0.12
GCN1-205ENST00000548821 SPHKAPQ2M3C7 1700 aa14.31□□□□□ -0.12
GCN1-205ENST00000548821 SETBP1Q9Y6X0 1596 aa14.3□□□□□ -0.12
GCN1-205ENST00000548821 ZNF772Q68DY9 489 aaPredicted RBP14.3□□□□□ -0.12
GCN1-205ENST00000548821 LRRC59Q96AG4 307 aaKnown RBP14.3□□□□□ -0.12
GCN1-205ENST00000548821 MYO5BQ9ULV0 1848 aa14.29□□□□□ -0.12
GCN1-205ENST00000548821 CCDC144AA2RUR9 1427 aa14.27□□□□□ -0.12
GCN1-205ENST00000548821 BRINP3Q76B58 766 aa14.27□□□□□ -0.13
GCN1-205ENST00000548821 MPHOSPH9Q99550 1183 aa14.27□□□□□ -0.13
GCN1-205ENST00000548821 METP08581 1390 aa14.26□□□□□ -0.13
GCN1-205ENST00000548821 PTPRUQ92729 1446 aa14.25□□□□□ -0.13
GCN1-205ENST00000548821 ANKRD30BQ9BXX2 1392 aa14.25□□□□□ -0.13
GCN1-205ENST00000548821 KIF1BO60333 1816 aa14.25□□□□□ -0.13
GCN1-205ENST00000548821 PHLPP1O60346 1717 aa14.25□□□□□ -0.13
GCN1-205ENST00000548821 RGS17Q9UGC6 210 aaPredicted RBP14.24□□□□□ -0.13
GCN1-205ENST00000548821 NEXMIFQ5QGS0 1516 aa14.23□□□□□ -0.13
GCN1-205ENST00000548821 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.23□□□□□ -0.13
GCN1-205ENST00000548821 ADGRL3Q9HAR2 1447 aa14.23□□□□□ -0.13
GCN1-205ENST00000548821 CLTCL1P53675 1640 aa14.23□□□□□ -0.13
GCN1-205ENST00000548821 RGL3Q3MIN7 710 aa14.22□□□□□ -0.13
GCN1-205ENST00000548821 PTCH1Q13635 1447 aa14.22□□□□□ -0.13
GCN1-205ENST00000548821 AHDC1Q5TGY3 1603 aaPredicted RBP14.21□□□□□ -0.13
GCN1-205ENST00000548821 POTEAQ6S8J7 498 aa14.2□□□□□ -0.14
GCN1-205ENST00000548821 STAC3Q96MF2 364 aa14.2□□□□□ -0.14
GCN1-205ENST00000548821 SETD5Q9C0A6 1442 aa14.2□□□□□ -0.14
GCN1-205ENST00000548821 LRPPRCP42704 1394 aaKnown RBP14.2□□□□□ -0.14
GCN1-205ENST00000548821 MST1RQ04912 1400 aa14.19□□□□□ -0.14
GCN1-205ENST00000548821 NUTM2BA6NNL0 878 aaPredicted RBP14.19□□□□□ -0.14
GCN1-205ENST00000548821 NUTM2EB1AL46 878 aaPredicted RBP14.19□□□□□ -0.14
GCN1-205ENST00000548821 RXRBP28702 533 aa14.19□□□□□ -0.14
GCN1-205ENST00000548821 NUTM2AQ8IVF1 878 aaPredicted RBP14.19□□□□□ -0.14
GCN1-205ENST00000548821 XRN1Q8IZH2 1706 aaKnown RBP14.18□□□□□ -0.14
GCN1-205ENST00000548821 PRAG1Q86YV5 1406 aa14.17□□□□□ -0.14
GCN1-205ENST00000548821 COL16A1Q07092 1604 aaPredicted RBP14.17□□□□□ -0.14
GCN1-205ENST00000548821 NRXN3Q9Y4C0 1643 aa14.17□□□□□ -0.14
GCN1-205ENST00000548821 FOXD1Q16676 465 aa14.17□□□□□ -0.14
GCN1-205ENST00000548821 SIRT1Q96EB6 747 aa14.17□□□□□ -0.14
GCN1-205ENST00000548821 ASXL1Q8IXJ9 1541 aa14.16□□□□□ -0.14
GCN1-205ENST00000548821 HRCP23327 699 aa14.16□□□□□ -0.14
GCN1-205ENST00000548821 NPHP3Q7Z494 1330 aa14.15□□□□□ -0.14
GCN1-205ENST00000548821 C1orf167Q5SNV9 1468 aa14.15□□□□□ -0.14
GCN1-205ENST00000548821 ESCO1Q5FWF5 840 aa14.15□□□□□ -0.14
GCN1-205ENST00000548821 NGLY1Q96IV0 654 aa14.15□□□□□ -0.14
GCN1-205ENST00000548821 DHX57Q6P158 1386 aaKnown RBP14.14□□□□□ -0.15
GCN1-205ENST00000548821 ABCC11Q96J66 1382 aa14.14□□□□□ -0.15
GCN1-205ENST00000548821 ROBO2Q9HCK4 1378 aa14.14□□□□□ -0.15
GCN1-205ENST00000548821 STK26Q9P289 416 aa14.14□□□□□ -0.15
GCN1-205ENST00000548821 SHPRHQ149N8 1683 aa14.13□□□□□ -0.15
GCN1-205ENST00000548821 ADGRF5Q8IZF2 1346 aa14.13□□□□□ -0.15
GCN1-205ENST00000548821 C8orf37Q96NL8 207 aa14.12□□□□□ -0.15
GCN1-205ENST00000548821 SOS2Q07890 1332 aaPredicted RBP14.12□□□□□ -0.15
GCN1-205ENST00000548821 SPATA31E1Q6ZUB1 1445 aa14.11□□□□□ -0.15
GCN1-205ENST00000548821 ORAI2Q96SN7 254 aa14.11□□□□□ -0.15
GCN1-205ENST00000548821 C14orf93Q9H972 538 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms