RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.04■■□□□ 1.28
SSH1-204ENST00000546697 NWD1Q149M9 1564 aa23.04■■□□□ 1.28
SSH1-204ENST00000546697 CLTCL1P53675 1640 aa23.04■■□□□ 1.28
SSH1-204ENST00000546697 DIP2AQ14689 1571 aa23.01■■□□□ 1.27
SSH1-204ENST00000546697 SETD5Q9C0A6 1442 aa23■■□□□ 1.27
SSH1-204ENST00000546697 ALKQ9UM73 1620 aa23■■□□□ 1.27
SSH1-204ENST00000546697 ADAMTS13Q76LX8 1427 aa22.99■■□□□ 1.27
SSH1-204ENST00000546697 NKTRP30414 1462 aaKnown RBP22.98■■□□□ 1.27
SSH1-204ENST00000546697 KCNA6P17658 529 aa22.98■■□□□ 1.27
SSH1-204ENST00000546697 SLC4A1APQ9BWU0 796 aaKnown RBP22.98■■□□□ 1.27
SSH1-204ENST00000546697 TBX22Q9Y458 520 aa22.98■■□□□ 1.27
SSH1-204ENST00000546697 PIK3R4Q99570 1358 aa22.97■■□□□ 1.27
SSH1-204ENST00000546697 TRIM52Q96A61 297 aa22.96■■□□□ 1.27
SSH1-204ENST00000546697 SETBP1Q9Y6X0 1596 aa22.96■■□□□ 1.27
SSH1-204ENST00000546697 NEXMIFQ5QGS0 1516 aa22.95■■□□□ 1.26
SSH1-204ENST00000546697 XIRP1Q702N8 1843 aaKnown RBP22.95■■□□□ 1.26
SSH1-204ENST00000546697 CHD2O14647 1828 aaKnown RBP22.94■■□□□ 1.26
SSH1-204ENST00000546697 HRCP23327 699 aa22.94■■□□□ 1.26
SSH1-204ENST00000546697 KIF1BO60333 1816 aa22.94■■□□□ 1.26
SSH1-204ENST00000546697 SLC26A8Q96RN1 970 aa22.93■■□□□ 1.26
SSH1-204ENST00000546697 NRXN3Q9Y4C0 1643 aa22.93■■□□□ 1.26
SSH1-204ENST00000546697 UBAP1LF5GYI3 381 aa22.92■■□□□ 1.26
SSH1-204ENST00000546697 MPHOSPH9Q99550 1183 aa22.92■■□□□ 1.26
SSH1-204ENST00000546697 CHGAP10645 457 aaKnown RBP22.91■■□□□ 1.26
SSH1-204ENST00000546697 TOM1O60784 492 aa22.9■■□□□ 1.26
SSH1-204ENST00000546697 PPP1R15AO75807 674 aaPredicted RBP22.9■■□□□ 1.26
SSH1-204ENST00000546697 NCOA3Q9Y6Q9 1424 aa22.9■■□□□ 1.26
SSH1-204ENST00000546697 RAB3GAP2Q9H2M9 1393 aa22.89■■□□□ 1.26
SSH1-204ENST00000546697 RPGRIP1LQ68CZ1 1315 aa22.88■■□□□ 1.25
SSH1-204ENST00000546697 SPATA31E1Q6ZUB1 1445 aa22.86■■□□□ 1.25
SSH1-204ENST00000546697 TMEM94Q12767 1356 aa22.86■■□□□ 1.25
SSH1-204ENST00000546697 CCDC144AA2RUR9 1427 aa22.83■■□□□ 1.25
SSH1-204ENST00000546697 PRAG1Q86YV5 1406 aa22.82■■□□□ 1.24
SSH1-204ENST00000546697 XRN1Q8IZH2 1706 aaKnown RBP22.82■■□□□ 1.24
SSH1-204ENST00000546697 PPLO60437 1756 aa22.82■■□□□ 1.24
SSH1-204ENST00000546697 PTPRUQ92729 1446 aa22.81■■□□□ 1.24
SSH1-204ENST00000546697 SETD1AO15047 1707 aaKnown RBP22.79■■□□□ 1.24
SSH1-204ENST00000546697 VGFO15240 615 aaPredicted RBP22.79■■□□□ 1.24
SSH1-204ENST00000546697 FOXD1Q16676 465 aa22.79■■□□□ 1.24
SSH1-204ENST00000546697 ZNF326Q5BKZ1 582 aaKnown RBP22.79■■□□□ 1.24
SSH1-204ENST00000546697 NUTM2DQ5VT03 806 aaPredicted RBP22.79■■□□□ 1.24
SSH1-204ENST00000546697 PROSER2Q86WR7 435 aaPredicted RBP22.78■■□□□ 1.24
SSH1-204ENST00000546697 BCANQ96GW7 911 aa22.78■■□□□ 1.24
SSH1-204ENST00000546697 IFT172Q9UG01 1749 aa22.77■■□□□ 1.24
SSH1-204ENST00000546697 FAM135BQ49AJ0 1406 aa22.77■■□□□ 1.24
SSH1-204ENST00000546697 METP08581 1390 aa22.76■■□□□ 1.23
SSH1-204ENST00000546697 ANKRD30BQ9BXX2 1392 aa22.75■■□□□ 1.23
SSH1-204ENST00000546697 AMOTL2Q9Y2J4 779 aa22.72■■□□□ 1.23
SSH1-204ENST00000546697 MSH6P52701 1360 aa22.71■■□□□ 1.23
SSH1-204ENST00000546697 DCCP43146 1447 aa22.71■■□□□ 1.23
SSH1-204ENST00000546697 NRXN1Q9ULB1 1477 aa22.7■■□□□ 1.22
SSH1-204ENST00000546697 PTCH1Q13635 1447 aa22.69■■□□□ 1.22
SSH1-204ENST00000546697 HSPA1LP34931 641 aa22.69■■□□□ 1.22
SSH1-204ENST00000546697 PIP4K2BP78356 416 aa22.69■■□□□ 1.22
SSH1-204ENST00000546697 PIK3C2GO75747 1445 aa22.67■■□□□ 1.22
SSH1-204ENST00000546697 C19orf44Q9H6X5 657 aa22.67■■□□□ 1.22
SSH1-204ENST00000546697 MYOM2P54296 1465 aa22.66■■□□□ 1.22
SSH1-204ENST00000546697 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.66■■□□□ 1.22
SSH1-204ENST00000546697 ADGRF5Q8IZF2 1346 aa22.64■■□□□ 1.22
SSH1-204ENST00000546697 RBM33Q96EV2 1170 aaKnown RBP22.64■■□□□ 1.21
SSH1-204ENST00000546697 SENP3Q9H4L4 574 aaPredicted RBP22.64■■□□□ 1.21
SSH1-204ENST00000546697 TECPR2O15040 1411 aa22.64■■□□□ 1.21
SSH1-204ENST00000546697 DISP3Q9P2K9 1392 aa22.63■■□□□ 1.21
SSH1-204ENST00000546697 ROBO1Q9Y6N7 1651 aa22.62■■□□□ 1.21
SSH1-204ENST00000546697 SLAIN2Q9P270 581 aa22.62■■□□□ 1.21
SSH1-204ENST00000546697 SCAF1Q9H7N4 1312 aaKnown RBP22.61■■□□□ 1.21
SSH1-204ENST00000546697 CADPS2Q86UW7 1296 aa22.61■■□□□ 1.21
SSH1-204ENST00000546697 ADGRL3Q9HAR2 1447 aa22.61■■□□□ 1.21
SSH1-204ENST00000546697 ASXL1Q8IXJ9 1541 aa22.59■■□□□ 1.21
SSH1-204ENST00000546697 RGL3Q3MIN7 710 aa22.59■■□□□ 1.21
SSH1-204ENST00000546697 STAC3Q96MF2 364 aa22.59■■□□□ 1.21
SSH1-204ENST00000546697 ILDR2Q71H61 639 aa22.58■■□□□ 1.21
SSH1-204ENST00000546697 LAMC1P11047 1609 aa22.57■■□□□ 1.2
SSH1-204ENST00000546697 ROBO2Q9HCK4 1378 aa22.57■■□□□ 1.2
SSH1-204ENST00000546697 KNDC1Q76NI1 1749 aa22.57■■□□□ 1.2
SSH1-204ENST00000546697 ABCC11Q96J66 1382 aa22.56■■□□□ 1.2
SSH1-204ENST00000546697 NALCNQ8IZF0 1738 aa22.56■■□□□ 1.2
SSH1-204ENST00000546697 LRPPRCP42704 1394 aaKnown RBP22.55■■□□□ 1.2
SSH1-204ENST00000546697 C14orf93Q9H972 538 aaKnown RBP22.54■■□□□ 1.2
SSH1-204ENST00000546697 MST1RQ04912 1400 aa22.54■■□□□ 1.2
SSH1-204ENST00000546697 AHDC1Q5TGY3 1603 aaPredicted RBP22.53■■□□□ 1.2
SSH1-204ENST00000546697 ATF3P18847 181 aa22.52■■□□□ 1.2
SSH1-204ENST00000546697 SIRT1Q96EB6 747 aa22.52■■□□□ 1.2
SSH1-204ENST00000546697 MED1Q15648 1581 aaPredicted RBP22.51■■□□□ 1.19
SSH1-204ENST00000546697 DHX57Q6P158 1386 aaKnown RBP22.5■■□□□ 1.19
SSH1-204ENST00000546697 COL16A1Q07092 1604 aaPredicted RBP22.49■■□□□ 1.19
SSH1-204ENST00000546697 C14orf37Q86TY3 774 aa22.49■■□□□ 1.19
SSH1-204ENST00000546697 YTHDC2Q9H6S0 1430 aaKnown RBP22.48■■□□□ 1.19
SSH1-204ENST00000546697 ADGRB1O14514 1584 aa22.48■■□□□ 1.19
SSH1-204ENST00000546697 CDC42BPGQ6DT37 1551 aa22.48■■□□□ 1.19
SSH1-204ENST00000546697 BRINP3Q76B58 766 aa22.46■■□□□ 1.19
SSH1-204ENST00000546697 DLC1Q96QB1 1528 aa22.46■■□□□ 1.19
SSH1-204ENST00000546697 PHLPP1O60346 1717 aa22.45■■□□□ 1.19
SSH1-204ENST00000546697 NHSL1Q5SYE7 1610 aa22.45■■□□□ 1.18
SSH1-204ENST00000546697 C1orf167Q5SNV9 1468 aa22.44■■□□□ 1.18
SSH1-204ENST00000546697 SOCS7O14512 581 aa22.42■■□□□ 1.18
SSH1-204ENST00000546697 CFAP70Q5T0N1 1121 aa22.42■■□□□ 1.18
SSH1-204ENST00000546697 JCADQ9P266 1359 aa22.4■■□□□ 1.18
SSH1-204ENST00000546697 TMEM132EQ6IEE7 984 aa22.4■■□□□ 1.18
SSH1-204ENST00000546697 DCAF11Q8TEB1 546 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms