RNA–Protein interactions for RNA: ENST00000546253.5

SLC3A2-222, Transcript of solute carrier family 3 member 2, humanhuman

TSL 4

Gene SLC3A2, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-222ENST00000546253 PPP1R15AO75807 674 aaPredicted RBP23.48■■□□□ 1.35
SLC3A2-222ENST00000546253 SPATA31A6Q5VVP1 1343 aa23.48■■□□□ 1.35
SLC3A2-222ENST00000546253 C14orf37Q86TY3 774 aa23.47■■□□□ 1.35
SLC3A2-222ENST00000546253 ANKRD30AQ9BXX3 1397 aa23.47■■□□□ 1.35
SLC3A2-222ENST00000546253 NOS1P29475 1434 aa23.46■■□□□ 1.35
SLC3A2-222ENST00000546253 HDGFP51858 240 aaKnown RBP23.46■■□□□ 1.35
SLC3A2-222ENST00000546253 DAPK1P53355 1430 aa23.46■■□□□ 1.35
SLC3A2-222ENST00000546253 FGD6Q6ZV73 1430 aa23.45■■□□□ 1.34
SLC3A2-222ENST00000546253 PTPN23Q9H3S7 1636 aa23.44■■□□□ 1.34
SLC3A2-222ENST00000546253 PLEKHG1Q9ULL1 1385 aa23.43■■□□□ 1.34
SLC3A2-222ENST00000546253 UPF1Q92900 1129 aaKnown RBP eCLIP23.43■■□□□ 1.34
SLC3A2-222ENST00000546253 TRIM52Q96A61 297 aa23.43■■□□□ 1.34
SLC3A2-222ENST00000546253 COL16A1Q07092 1604 aaPredicted RBP23.43■■□□□ 1.34
SLC3A2-222ENST00000546253 NCOA3Q9Y6Q9 1424 aa23.42■■□□□ 1.34
SLC3A2-222ENST00000546253 CHIC2Q9UKJ5 165 aa23.41■■□□□ 1.34
SLC3A2-222ENST00000546253 LRP6O75581 1613 aa23.4■■□□□ 1.34
SLC3A2-222ENST00000546253 APLP2Q06481 763 aa23.39■■□□□ 1.33
SLC3A2-222ENST00000546253 CADPS2Q86UW7 1296 aa23.39■■□□□ 1.33
SLC3A2-222ENST00000546253 ATF3P18847 181 aa23.38■■□□□ 1.33
SLC3A2-222ENST00000546253 RIMS2Q9UQ26 1411 aa23.38■■□□□ 1.33
SLC3A2-222ENST00000546253 RPRD2Q5VT52 1461 aaKnown RBP23.37■■□□□ 1.33
SLC3A2-222ENST00000546253 ZFYVE9O95405 1425 aa23.37■■□□□ 1.33
SLC3A2-222ENST00000546253 CHD2O14647 1828 aaKnown RBP23.36■■□□□ 1.33
SLC3A2-222ENST00000546253 RXRBP28702 533 aa23.36■■□□□ 1.33
SLC3A2-222ENST00000546253 TBX22Q9Y458 520 aa23.36■■□□□ 1.33
SLC3A2-222ENST00000546253 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.35■■□□□ 1.33
SLC3A2-222ENST00000546253 AHDC1Q5TGY3 1603 aaPredicted RBP23.34■■□□□ 1.33
SLC3A2-222ENST00000546253 C19orf44Q9H6X5 657 aa23.33■■□□□ 1.33
SLC3A2-222ENST00000546253 SHPRHQ149N8 1683 aa23.32■■□□□ 1.32
SLC3A2-222ENST00000546253 CHGAP10645 457 aaKnown RBP23.32■■□□□ 1.32
SLC3A2-222ENST00000546253 NUTM2BA6NNL0 878 aaPredicted RBP23.3■■□□□ 1.32
SLC3A2-222ENST00000546253 NUTM2EB1AL46 878 aaPredicted RBP23.3■■□□□ 1.32
SLC3A2-222ENST00000546253 NUTM2AQ8IVF1 878 aaPredicted RBP23.3■■□□□ 1.32
SLC3A2-222ENST00000546253 CDK12Q9NYV4 1490 aaPredicted RBP23.3■■□□□ 1.32
SLC3A2-222ENST00000546253 GCC2Q8IWJ2 1684 aa23.29■■□□□ 1.32
SLC3A2-222ENST00000546253 PIK3R4Q99570 1358 aa23.28■■□□□ 1.32
SLC3A2-222ENST00000546253 DIP2AQ14689 1571 aa23.28■■□□□ 1.32
SLC3A2-222ENST00000546253 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.28■■□□□ 1.32
SLC3A2-222ENST00000546253 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
SLC3A2-222ENST00000546253 ADGRL2O95490 1459 aa23.26■■□□□ 1.31
SLC3A2-222ENST00000546253 ANKRD50Q9ULJ7 1429 aa23.25■■□□□ 1.31
SLC3A2-222ENST00000546253 MYO5BQ9ULV0 1848 aa23.25■■□□□ 1.31
SLC3A2-222ENST00000546253 AFF2P51816 1311 aa23.25■■□□□ 1.31
SLC3A2-222ENST00000546253 BRINP3Q76B58 766 aa23.24■■□□□ 1.31
SLC3A2-222ENST00000546253 ADAMTS13Q76LX8 1427 aa23.24■■□□□ 1.31
SLC3A2-222ENST00000546253 LOC105371045A0A1W2PR82 267 aa23.23■■□□□ 1.31
SLC3A2-222ENST00000546253 NUTM2DQ5VT03 806 aaPredicted RBP23.22■■□□□ 1.31
SLC3A2-222ENST00000546253 SRCAPQ6ZRS2 3230 aa23.22■■□□□ 1.31
SLC3A2-222ENST00000546253 TRPM2O94759 1503 aa23.22■■□□□ 1.31
SLC3A2-222ENST00000546253 DCCP43146 1447 aa23.21■■□□□ 1.31
SLC3A2-222ENST00000546253 AMOTL2Q9Y2J4 779 aa23.2■■□□□ 1.3
SLC3A2-222ENST00000546253 FAM50AQ14320 339 aaKnown RBP23.19■■□□□ 1.3
SLC3A2-222ENST00000546253 ASXL1Q8IXJ9 1541 aa23.18■■□□□ 1.3
SLC3A2-222ENST00000546253 SETD5Q9C0A6 1442 aa23.17■■□□□ 1.3
SLC3A2-222ENST00000546253 LRRC59Q96AG4 307 aaKnown RBP23.17■■□□□ 1.3
SLC3A2-222ENST00000546253 RBM6P78332 1123 aaKnown RBP23.16■■□□□ 1.3
SLC3A2-222ENST00000546253 C8orf37Q96NL8 207 aa23.15■■□□□ 1.3
SLC3A2-222ENST00000546253 QTRT2Q9H974 415 aaKnown RBP23.14■■□□□ 1.29
SLC3A2-222ENST00000546253 RGS12O14924 1447 aa23.13■■□□□ 1.29
SLC3A2-222ENST00000546253 FOXD1Q16676 465 aa23.12■■□□□ 1.29
SLC3A2-222ENST00000546253 PTPRUQ92729 1446 aa23.11■■□□□ 1.29
SLC3A2-222ENST00000546253 UNC13BO14795 1591 aa23.1■■□□□ 1.29
SLC3A2-222ENST00000546253 MST1RQ04912 1400 aa23.1■■□□□ 1.29
SLC3A2-222ENST00000546253 NGLY1Q96IV0 654 aa23.1■■□□□ 1.29
SLC3A2-222ENST00000546253 NHSL1Q5SYE7 1610 aa23.09■■□□□ 1.29
SLC3A2-222ENST00000546253 E9PCH4 1651 aa23.08■■□□□ 1.29
SLC3A2-222ENST00000546253 ATAD2Q6PL18 1390 aa23.07■■□□□ 1.28
SLC3A2-222ENST00000546253 PNPLA6Q8IY17 1366 aa23.07■■□□□ 1.28
SLC3A2-222ENST00000546253 XRN1Q8IZH2 1706 aaKnown RBP23.05■■□□□ 1.28
SLC3A2-222ENST00000546253 ADAMTS2O95450 1211 aa23.04■■□□□ 1.28
SLC3A2-222ENST00000546253 ADGRL3Q9HAR2 1447 aa23.03■■□□□ 1.28
SLC3A2-222ENST00000546253 ZNF326Q5BKZ1 582 aaKnown RBP23.03■■□□□ 1.28
SLC3A2-222ENST00000546253 SETBP1Q9Y6X0 1596 aa23.02■■□□□ 1.28
SLC3A2-222ENST00000546253 IQGAP3Q86VI3 1631 aa23.02■■□□□ 1.28
SLC3A2-222ENST00000546253 DDX17Q92841 729 aaKnown RBP23.02■■□□□ 1.28
SLC3A2-222ENST00000546253 ZRANB1Q9UGI0 708 aa23.01■■□□□ 1.27
SLC3A2-222ENST00000546253 NUP155O75694 1391 aa23■■□□□ 1.27
SLC3A2-222ENST00000546253 USP21Q9UK80 565 aa22.98■■□□□ 1.27
SLC3A2-222ENST00000546253 TRPC5Q9UL62 973 aaPredicted RBP22.98■■□□□ 1.27
SLC3A2-222ENST00000546253 METP08581 1390 aa22.98■■□□□ 1.27
SLC3A2-222ENST00000546253 NRXN3Q9Y4C0 1643 aa22.97■■□□□ 1.27
SLC3A2-222ENST00000546253 ROCK1Q13464 1354 aa22.97■■□□□ 1.27
SLC3A2-222ENST00000546253 C1orf167Q5SNV9 1468 aa22.94■■□□□ 1.26
SLC3A2-222ENST00000546253 NALCNQ8IZF0 1738 aa22.93■■□□□ 1.26
SLC3A2-222ENST00000546253 PTCH1Q13635 1447 aa22.92■■□□□ 1.26
SLC3A2-222ENST00000546253 EP400Q96L91 3159 aa22.9■■□□□ 1.26
SLC3A2-222ENST00000546253 SOS2Q07890 1332 aaPredicted RBP22.89■■□□□ 1.26
SLC3A2-222ENST00000546253 CCDC125Q86Z20 511 aa22.89■■□□□ 1.25
SLC3A2-222ENST00000546253 FNBP4Q8N3X1 1017 aaPredicted RBP22.89■■□□□ 1.25
SLC3A2-222ENST00000546253 SPHKAPQ2M3C7 1700 aa22.88■■□□□ 1.25
SLC3A2-222ENST00000546253 ATRNO75882 1429 aa22.87■■□□□ 1.25
SLC3A2-222ENST00000546253 LAMC1P11047 1609 aa22.86■■□□□ 1.25
SLC3A2-222ENST00000546253 ORAI2Q96SN7 254 aa22.86■■□□□ 1.25
SLC3A2-222ENST00000546253 NEXMIFQ5QGS0 1516 aa22.82■■□□□ 1.24
SLC3A2-222ENST00000546253 ITGAEP38570 1179 aa22.82■■□□□ 1.24
SLC3A2-222ENST00000546253 NPHP3Q7Z494 1330 aa22.81■■□□□ 1.24
SLC3A2-222ENST00000546253 COL22A1Q8NFW1 1626 aaPredicted RBP22.79■■□□□ 1.24
SLC3A2-222ENST00000546253 ROBO2Q9HCK4 1378 aa22.79■■□□□ 1.24
SLC3A2-222ENST00000546253 VGFO15240 615 aaPredicted RBP22.79■■□□□ 1.24
SLC3A2-222ENST00000546253 MYOM2P54296 1465 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms