RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 CDCA8Q53HL2 280 aa23.84■■□□□ 1.41
SCARB1-208ENST00000544327 EIF3AQ14152 1382 aaKnown RBP23.84■■□□□ 1.41
SCARB1-208ENST00000544327 NRXN1Q9ULB1 1477 aa23.83■■□□□ 1.41
SCARB1-208ENST00000544327 BLMP54132 1417 aaPredicted RBP23.83■■□□□ 1.41
SCARB1-208ENST00000544327 ABCA6Q8N139 1617 aa23.83■■□□□ 1.41
SCARB1-208ENST00000544327 CD109Q6YHK3 1445 aa23.82■■□□□ 1.4
SCARB1-208ENST00000544327 HECW2Q9P2P5 1572 aa23.82■■□□□ 1.4
SCARB1-208ENST00000544327 FRMPD1Q5SYB0 1578 aa23.82■■□□□ 1.4
SCARB1-208ENST00000544327 MYT1LQ9UL68 1186 aa23.81■■□□□ 1.4
SCARB1-208ENST00000544327 MROH2AA6NES4 1674 aa23.81■■□□□ 1.4
SCARB1-208ENST00000544327 UGGT1Q9NYU2 1555 aa23.8■■□□□ 1.4
SCARB1-208ENST00000544327 MYOM1P52179 1685 aa23.8■■□□□ 1.4
SCARB1-208ENST00000544327 ADGRB3O60242 1522 aa23.8■■□□□ 1.4
SCARB1-208ENST00000544327 PDE3BQ13370 1112 aa23.8■■□□□ 1.4
SCARB1-208ENST00000544327 SLC24A1O60721 1099 aa23.78■■□□□ 1.4
SCARB1-208ENST00000544327 KDM5AP29375 1690 aaKnown RBP23.78■■□□□ 1.4
SCARB1-208ENST00000544327 MYO3AQ8NEV4 1616 aa23.77■■□□□ 1.4
SCARB1-208ENST00000544327 CC2D1BQ5T0F9 858 aaKnown RBP23.77■■□□□ 1.4
SCARB1-208ENST00000544327 NPC1L1Q9UHC9 1359 aa23.76■■□□□ 1.39
SCARB1-208ENST00000544327 NEO1Q92859 1461 aa23.76■■□□□ 1.39
SCARB1-208ENST00000544327 SETBP1Q9Y6X0 1596 aa23.75■■□□□ 1.39
SCARB1-208ENST00000544327 ASXL1Q8IXJ9 1541 aa23.74■■□□□ 1.39
SCARB1-208ENST00000544327 B4GALNT3Q6L9W6 998 aa23.73■■□□□ 1.39
SCARB1-208ENST00000544327 AMER1Q5JTC6 1135 aaPredicted RBP23.72■■□□□ 1.39
SCARB1-208ENST00000544327 NPATQ14207 1427 aa23.71■■□□□ 1.39
SCARB1-208ENST00000544327 KNSTRNQ9Y448 316 aa23.7■■□□□ 1.39
SCARB1-208ENST00000544327 SBNO2Q9Y2G9 1366 aa23.7■■□□□ 1.39
SCARB1-208ENST00000544327 PPLO60437 1756 aa23.7■■□□□ 1.38
SCARB1-208ENST00000544327 ADGRF5Q8IZF2 1346 aa23.7■■□□□ 1.38
SCARB1-208ENST00000544327 ABCC3O15438 1527 aa23.7■■□□□ 1.38
SCARB1-208ENST00000544327 ERVK-7P63135 1459 aa23.69■■□□□ 1.38
SCARB1-208ENST00000544327 PIK3C2GO75747 1445 aa23.68■■□□□ 1.38
SCARB1-208ENST00000544327 CFAP70Q5T0N1 1121 aa23.68■■□□□ 1.38
SCARB1-208ENST00000544327 FANCIQ9NVI1 1328 aa23.66■■□□□ 1.38
SCARB1-208ENST00000544327 CAMSAP1Q5T5Y3 1602 aa23.65■■□□□ 1.38
SCARB1-208ENST00000544327 PPP2R1AP30153 589 aa23.65■■□□□ 1.38
SCARB1-208ENST00000544327 NOS1P29475 1434 aa23.64■■□□□ 1.38
SCARB1-208ENST00000544327 RRP1P56182 461 aaKnown RBP23.63■■□□□ 1.37
SCARB1-208ENST00000544327 DIP2CQ9Y2E4 1556 aa23.63■■□□□ 1.37
SCARB1-208ENST00000544327 RPGRIP1LQ68CZ1 1315 aa23.63■■□□□ 1.37
SCARB1-208ENST00000544327 RCAN3Q9UKA8 241 aa23.63■■□□□ 1.37
SCARB1-208ENST00000544327 PIK3C2BO00750 1634 aa23.63■■□□□ 1.37
SCARB1-208ENST00000544327 ZC3H13Q5T200 1668 aaKnown RBP23.62■■□□□ 1.37
SCARB1-208ENST00000544327 SENP3-EIF4A1A0A087X0R7 540 aa23.62■■□□□ 1.37
SCARB1-208ENST00000544327 RICTORQ6R327 1708 aa23.61■■□□□ 1.37
SCARB1-208ENST00000544327 ADGRB1O14514 1584 aa23.6■■□□□ 1.37
SCARB1-208ENST00000544327 ANP32EQ9BTT0 268 aa23.59■■□□□ 1.37
SCARB1-208ENST00000544327 CCDC136Q96JN2 1154 aa23.58■■□□□ 1.37
SCARB1-208ENST00000544327 ARHGAP31Q2M1Z3 1444 aa23.58■■□□□ 1.37
SCARB1-208ENST00000544327 SIGLEC1Q9BZZ2 1709 aa23.58■■□□□ 1.36
SCARB1-208ENST00000544327 C14orf93Q9H972 538 aaKnown RBP23.56■■□□□ 1.36
SCARB1-208ENST00000544327 ADAMTS8Q9UP79 889 aa23.56■■□□□ 1.36
SCARB1-208ENST00000544327 GLI2P10070 1586 aa23.56■■□□□ 1.36
SCARB1-208ENST00000544327 GGT6Q6P531 493 aa23.55■■□□□ 1.36
SCARB1-208ENST00000544327 QRICH2Q9H0J4 1663 aa23.54■■□□□ 1.36
SCARB1-208ENST00000544327 CENPJQ9HC77 1338 aaPredicted RBP23.54■■□□□ 1.36
SCARB1-208ENST00000544327 CDCA7LQ96GN5 454 aa23.53■■□□□ 1.36
SCARB1-208ENST00000544327 SALL2Q9Y467 1007 aaPredicted RBP23.53■■□□□ 1.36
SCARB1-208ENST00000544327 WDR43Q15061 677 aaKnown RBP eCLIP23.52■■□□□ 1.36
SCARB1-208ENST00000544327 CFAP65Q6ZU64 1925 aaKnown RBP23.52■■□□□ 1.36
SCARB1-208ENST00000544327 NEXMIFQ5QGS0 1516 aa23.51■■□□□ 1.35
SCARB1-208ENST00000544327 ZNF521Q96K83 1311 aa23.5■■□□□ 1.35
SCARB1-208ENST00000544327 RAPGEF3O95398 923 aa23.49■■□□□ 1.35
SCARB1-208ENST00000544327 USP32Q8NFA0 1604 aa23.48■■□□□ 1.35
SCARB1-208ENST00000544327 CHGAP10645 457 aaKnown RBP23.48■■□□□ 1.35
SCARB1-208ENST00000544327 CARD14Q9BXL6 1004 aa23.48■■□□□ 1.35
SCARB1-208ENST00000544327 PLEKHH1Q9ULM0 1364 aa23.46■■□□□ 1.35
SCARB1-208ENST00000544327 PUS7Q96PZ0 661 aaKnown RBP23.46■■□□□ 1.35
SCARB1-208ENST00000544327 ZFYVE9O95405 1425 aa23.46■■□□□ 1.35
SCARB1-208ENST00000544327 EXOC6Q8TAG9 804 aa23.45■■□□□ 1.34
SCARB1-208ENST00000544327 ARHGEF28Q8N1W1 1705 aaKnown RBP23.44■■□□□ 1.34
SCARB1-208ENST00000544327 MSH5O43196 834 aa23.44■■□□□ 1.34
SCARB1-208ENST00000544327 POLR3AO14802 1390 aaPredicted RBP23.41■■□□□ 1.34
SCARB1-208ENST00000544327 VGFO15240 615 aaPredicted RBP23.41■■□□□ 1.34
SCARB1-208ENST00000544327 YEATS2Q9ULM3 1422 aa23.41■■□□□ 1.34
SCARB1-208ENST00000544327 PREX1Q8TCU6 1659 aa23.4■■□□□ 1.34
SCARB1-208ENST00000544327 NGEFQ8N5V2 710 aa23.4■■□□□ 1.34
SCARB1-208ENST00000544327 TRAK1Q9UPV9 953 aa23.4■■□□□ 1.34
SCARB1-208ENST00000544327 DUSP27Q5VZP5 1158 aa23.39■■□□□ 1.33
SCARB1-208ENST00000544327 SLC52A1Q9NWF4 448 aa23.39■■□□□ 1.33
SCARB1-208ENST00000544327 NSD3Q9BZ95 1437 aa23.38■■□□□ 1.33
SCARB1-208ENST00000544327 GOLGA2Q08379 1002 aa23.38■■□□□ 1.33
SCARB1-208ENST00000544327 TMEM131LA2VDJ0 1609 aa23.37■■□□□ 1.33
SCARB1-208ENST00000544327 TRMT2AQ8IZ69 625 aaKnown RBP23.36■■□□□ 1.33
SCARB1-208ENST00000544327 TULP4Q9NRJ4 1543 aa23.36■■□□□ 1.33
SCARB1-208ENST00000544327 REREQ9P2R6 1566 aa23.36■■□□□ 1.33
SCARB1-208ENST00000544327 TMEM132EQ6IEE7 984 aa23.35■■□□□ 1.33
SCARB1-208ENST00000544327 SLFN5Q08AF3 891 aa23.34■■□□□ 1.33
SCARB1-208ENST00000544327 SHPRHQ149N8 1683 aa23.34■■□□□ 1.33
SCARB1-208ENST00000544327 IDI1Q13907 227 aa23.33■■□□□ 1.33
SCARB1-208ENST00000544327 DIP2BQ9P265 1576 aa23.32■■□□□ 1.32
SCARB1-208ENST00000544327 MYO5BQ9ULV0 1848 aa23.32■■□□□ 1.32
SCARB1-208ENST00000544327 EVC2Q86UK5 1308 aa23.31■■□□□ 1.32
SCARB1-208ENST00000544327 NSD2O96028 1365 aa23.31■■□□□ 1.32
SCARB1-208ENST00000544327 TCERG1O14776 1098 aaKnown RBP23.3■■□□□ 1.32
SCARB1-208ENST00000544327 SLC12A5Q9H2X9 1139 aa23.3■■□□□ 1.32
SCARB1-208ENST00000544327 ANKRD36BQ8N2N9 1353 aa23.3■■□□□ 1.32
SCARB1-208ENST00000544327 AGLP35573 1532 aa23.29■■□□□ 1.32
SCARB1-208ENST00000544327 CRBNQ96SW2 442 aa23.29■■□□□ 1.32
SCARB1-208ENST00000544327 PLIN1O60240 522 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms