RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 PRDM15P57071 1507 aaPredicted RBP20.94■□□□□ 0.94
SNRNP70-203ENST00000544278 CYB5RLQ6IPT4 315 aa20.93■□□□□ 0.94
SNRNP70-203ENST00000544278 SLC12A5Q9H2X9 1139 aa20.93■□□□□ 0.94
SNRNP70-203ENST00000544278 WASHC2CQ9Y4E1 1318 aa20.93■□□□□ 0.94
SNRNP70-203ENST00000544278 CRBNQ96SW2 442 aa20.93■□□□□ 0.94
SNRNP70-203ENST00000544278 CARD14Q9BXL6 1004 aa20.93■□□□□ 0.94
SNRNP70-203ENST00000544278 ATP7AQ04656 1500 aa20.92■□□□□ 0.94
SNRNP70-203ENST00000544278 CLTCL1P53675 1640 aa20.92■□□□□ 0.94
SNRNP70-203ENST00000544278 ERICH6BQ5W0A0 696 aa20.92■□□□□ 0.94
SNRNP70-203ENST00000544278 RRP7AQ9Y3A4 280 aaKnown RBP20.91■□□□□ 0.94
SNRNP70-203ENST00000544278 DEKP35659 375 aaKnown RBP20.91■□□□□ 0.94
SNRNP70-203ENST00000544278 UHRF1BP1LA0JNW5 1464 aa20.91■□□□□ 0.94
SNRNP70-203ENST00000544278 APAF1O14727 1248 aa20.91■□□□□ 0.94
SNRNP70-203ENST00000544278 NBR1Q14596 966 aa20.91■□□□□ 0.94
SNRNP70-203ENST00000544278 PAK3O75914 559 aaPredicted RBP20.9■□□□□ 0.94
SNRNP70-203ENST00000544278 SPINK5Q9NQ38 1064 aaPredicted RBP20.9■□□□□ 0.94
SNRNP70-203ENST00000544278 RNF123Q5XPI4 1314 aa20.89■□□□□ 0.94
SNRNP70-203ENST00000544278 PLEKHH1Q9ULM0 1364 aa20.89■□□□□ 0.93
SNRNP70-203ENST00000544278 DMRT2Q9Y5R5 561 aa20.89■□□□□ 0.93
SNRNP70-203ENST00000544278 NOS1P29475 1434 aa20.88■□□□□ 0.93
SNRNP70-203ENST00000544278 CD109Q6YHK3 1445 aa20.85■□□□□ 0.93
SNRNP70-203ENST00000544278 MLECQ14165 292 aa20.85■□□□□ 0.93
SNRNP70-203ENST00000544278 SCAF11Q99590 1463 aaKnown RBP20.84■□□□□ 0.93
SNRNP70-203ENST00000544278 MADDQ8WXG6 1647 aa20.83■□□□□ 0.93
SNRNP70-203ENST00000544278 RTEL1-TNFRSF6BF6WH68 1400 aa20.82■□□□□ 0.92
SNRNP70-203ENST00000544278 PTPRTO14522 1441 aa20.81■□□□□ 0.92
SNRNP70-203ENST00000544278 TRPM2O94759 1503 aa20.81■□□□□ 0.92
SNRNP70-203ENST00000544278 CABP2Q9NPB3 220 aa20.81■□□□□ 0.92
SNRNP70-203ENST00000544278 CDCA8Q53HL2 280 aa20.8■□□□□ 0.92
SNRNP70-203ENST00000544278 FANCIQ9NVI1 1328 aa20.8■□□□□ 0.92
SNRNP70-203ENST00000544278 RTN4Q9NQC3 1192 aaKnown RBP20.79■□□□□ 0.92
SNRNP70-203ENST00000544278 BCAR3O75815 825 aa20.79■□□□□ 0.92
SNRNP70-203ENST00000544278 FBXO31Q5XUX0 539 aaPredicted RBP20.79■□□□□ 0.92
SNRNP70-203ENST00000544278 CENPJQ9HC77 1338 aaPredicted RBP20.79■□□□□ 0.92
SNRNP70-203ENST00000544278 SPHKAPQ2M3C7 1700 aa20.79■□□□□ 0.92
SNRNP70-203ENST00000544278 EIF2AK4Q9P2K8 1649 aaKnown RBP20.78■□□□□ 0.92
SNRNP70-203ENST00000544278 DUSP27Q5VZP5 1158 aa20.76■□□□□ 0.91
SNRNP70-203ENST00000544278 MORC1Q86VD1 984 aa20.76■□□□□ 0.91
SNRNP70-203ENST00000544278 BCL2L13Q9BXK5 485 aa20.76■□□□□ 0.91
SNRNP70-203ENST00000544278 GOLGA2Q08379 1002 aa20.76■□□□□ 0.91
SNRNP70-203ENST00000544278 NPATQ14207 1427 aa20.75■□□□□ 0.91
SNRNP70-203ENST00000544278 IDI1Q13907 227 aa20.75■□□□□ 0.91
SNRNP70-203ENST00000544278 PLPPR3Q6T4P5 718 aa20.75■□□□□ 0.91
SNRNP70-203ENST00000544278 PDE3BQ13370 1112 aa20.74■□□□□ 0.91
SNRNP70-203ENST00000544278 FBLN1P23142 703 aa20.74■□□□□ 0.91
SNRNP70-203ENST00000544278 EIF3AQ14152 1382 aaKnown RBP20.73■□□□□ 0.91
SNRNP70-203ENST00000544278 ERVK-7P63135 1459 aa20.73■□□□□ 0.91
SNRNP70-203ENST00000544278 INO80Q9ULG1 1556 aaPredicted RBP20.73■□□□□ 0.91
SNRNP70-203ENST00000544278 MINK1Q8N4C8 1332 aaPredicted RBP20.73■□□□□ 0.91
SNRNP70-203ENST00000544278 ABCA9Q8IUA7 1624 aa20.72■□□□□ 0.91
SNRNP70-203ENST00000544278 KIDINS220Q9ULH0 1771 aa20.72■□□□□ 0.91
SNRNP70-203ENST00000544278 RGS3P49796 1198 aa20.72■□□□□ 0.91
SNRNP70-203ENST00000544278 CEP152O94986 1710 aa20.72■□□□□ 0.91
SNRNP70-203ENST00000544278 MROH1Q8NDA8 1641 aa20.71■□□□□ 0.91
SNRNP70-203ENST00000544278 BLMP54132 1417 aaPredicted RBP20.71■□□□□ 0.91
SNRNP70-203ENST00000544278 TET3O43151 1660 aa20.7■□□□□ 0.91
SNRNP70-203ENST00000544278 FRAT1Q92837 279 aaPredicted RBP20.7■□□□□ 0.9
SNRNP70-203ENST00000544278 NSD3Q9BZ95 1437 aa20.7■□□□□ 0.9
SNRNP70-203ENST00000544278 PPRC1Q5VV67 1664 aaKnown RBP20.7■□□□□ 0.9
SNRNP70-203ENST00000544278 RNF17Q9BXT8 1623 aaKnown RBP20.7■□□□□ 0.9
SNRNP70-203ENST00000544278 SRPK2P78362 688 aaKnown RBP20.69■□□□□ 0.9
SNRNP70-203ENST00000544278 ZNF518AQ6AHZ1 1483 aa20.69■□□□□ 0.9
SNRNP70-203ENST00000544278 MTHFSP49914 203 aa20.69■□□□□ 0.9
SNRNP70-203ENST00000544278 ABCA6Q8N139 1617 aa20.69■□□□□ 0.9
SNRNP70-203ENST00000544278 MROH2AA6NES4 1674 aa20.69■□□□□ 0.9
SNRNP70-203ENST00000544278 ASXL1Q8IXJ9 1541 aa20.69■□□□□ 0.9
SNRNP70-203ENST00000544278 GGNBP2Q9H3C7 697 aa20.68■□□□□ 0.9
SNRNP70-203ENST00000544278 ANP32AP39687 249 aaKnown RBP20.68■□□□□ 0.9
SNRNP70-203ENST00000544278 TNNQ9UQP3 1299 aa20.68■□□□□ 0.9
SNRNP70-203ENST00000544278 NOP58Q9Y2X3 529 aaKnown RBP20.68■□□□□ 0.9
SNRNP70-203ENST00000544278 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.68■□□□□ 0.9
SNRNP70-203ENST00000544278 STAG3Q9UJ98 1225 aa20.68■□□□□ 0.9
SNRNP70-203ENST00000544278 YEATS2Q9ULM3 1422 aa20.68■□□□□ 0.9
SNRNP70-203ENST00000544278 IQGAP1P46940 1657 aa20.67■□□□□ 0.9
SNRNP70-203ENST00000544278 PDE4AP27815 886 aa20.67■□□□□ 0.9
SNRNP70-203ENST00000544278 C14orf93Q9H972 538 aaKnown RBP20.66■□□□□ 0.9
SNRNP70-203ENST00000544278 FAM69CQ0P6D2 419 aa20.66■□□□□ 0.9
SNRNP70-203ENST00000544278 SLC4A3P48751 1232 aa20.65■□□□□ 0.9
SNRNP70-203ENST00000544278 SLFN5Q08AF3 891 aa20.65■□□□□ 0.9
SNRNP70-203ENST00000544278 LAS1LQ9Y4W2 734 aaKnown RBP20.65■□□□□ 0.9
SNRNP70-203ENST00000544278 PPM1GO15355 546 aaPredicted RBP20.65■□□□□ 0.9
SNRNP70-203ENST00000544278 CLUAP1Q96AJ1 413 aa20.65■□□□□ 0.9
SNRNP70-203ENST00000544278 PANK1Q8TE04 598 aa20.64■□□□□ 0.89
SNRNP70-203ENST00000544278 POGZQ7Z3K3 1410 aa20.64■□□□□ 0.89
SNRNP70-203ENST00000544278 EFCAB6Q5THR3 1501 aa20.64■□□□□ 0.89
SNRNP70-203ENST00000544278 U2SURPO15042 1029 aaKnown RBP20.63■□□□□ 0.89
SNRNP70-203ENST00000544278 CANXP27824 592 aaKnown RBP20.63■□□□□ 0.89
SNRNP70-203ENST00000544278 DEPDC5O75140 1603 aa20.63■□□□□ 0.89
SNRNP70-203ENST00000544278 LAMC1P11047 1609 aa20.63■□□□□ 0.89
SNRNP70-203ENST00000544278 U2AF1L5P0DN76 240 aaPredicted RBP20.62■□□□□ 0.89
SNRNP70-203ENST00000544278 U2AF1Q01081 240 aaKnown RBP eCLIP20.62■□□□□ 0.89
SNRNP70-203ENST00000544278 MAP3K4Q9Y6R4 1608 aa20.62■□□□□ 0.89
SNRNP70-203ENST00000544278 COG6Q9Y2V7 657 aa20.61■□□□□ 0.89
SNRNP70-203ENST00000544278 ZMYM4Q5VZL5 1548 aa20.61■□□□□ 0.89
SNRNP70-203ENST00000544278 VWDEQ8N2E2 1590 aa20.61■□□□□ 0.89
SNRNP70-203ENST00000544278 ARAP3Q8WWN8 1544 aa20.6■□□□□ 0.89
SNRNP70-203ENST00000544278 TCP11L2Q8N4U5 519 aa20.6■□□□□ 0.89
SNRNP70-203ENST00000544278 POGKQ9P215 609 aa20.6■□□□□ 0.89
SNRNP70-203ENST00000544278 PRAM1Q96QH2 718 aa20.6■□□□□ 0.89
SNRNP70-203ENST00000544278 ZNF521Q96K83 1311 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms