RNA–Protein interactions for RNA: ENST00000543949.2

COMMD5-207, Transcript of COMM domain containing 5, humanhuman

APPRIS P1 TSL 3 BASIC

Gene COMMD5, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD5-207ENST00000543949 ZNF316A6NFI3 1004 aaPredicted RBP30.05■■■□□ 2.4
COMMD5-207ENST00000543949 UBR1Q8IWV7 1749 aa30.04■■■□□ 2.4
COMMD5-207ENST00000543949 MYO3AQ8NEV4 1616 aa30.04■■■□□ 2.4
COMMD5-207ENST00000543949 KIAA1210Q9ULL0 1709 aa30.03■■■□□ 2.4
COMMD5-207ENST00000543949 NRXN1Q9ULB1 1477 aa30.03■■■□□ 2.4
COMMD5-207ENST00000543949 VGFO15240 615 aaPredicted RBP30.01■■■□□ 2.39
COMMD5-207ENST00000543949 ROCK2O75116 1388 aaKnown RBP30■■■□□ 2.39
COMMD5-207ENST00000543949 PTPRMP28827 1452 aa29.99■■■□□ 2.39
COMMD5-207ENST00000543949 ADGRF5Q8IZF2 1346 aa29.99■■■□□ 2.39
COMMD5-207ENST00000543949 ZFYVE9O95405 1425 aa29.99■■■□□ 2.39
COMMD5-207ENST00000543949 LAMC1P11047 1609 aa29.98■■■□□ 2.39
COMMD5-207ENST00000543949 EIF4G2P78344 907 aaKnown RBP eCLIP29.97■■■□□ 2.39
COMMD5-207ENST00000543949 CARD11Q9BXL7 1154 aa29.95■■■□□ 2.39
COMMD5-207ENST00000543949 PIK3C2GO75747 1445 aa29.95■■■□□ 2.39
COMMD5-207ENST00000543949 GPRASP1Q5JY77 1395 aa29.94■■■□□ 2.38
COMMD5-207ENST00000543949 RIMS2Q9UQ26 1411 aa29.94■■■□□ 2.38
COMMD5-207ENST00000543949 SETD1BQ9UPS6 1966 aaKnown RBP29.94■■■□□ 2.38
COMMD5-207ENST00000543949 CEP170BQ9Y4F5 1589 aaPredicted RBP29.92■■■□□ 2.38
COMMD5-207ENST00000543949 ZNF142P52746 1687 aaPredicted RBP29.92■■■□□ 2.38
COMMD5-207ENST00000543949 HDGFP51858 240 aaKnown RBP29.9■■■□□ 2.38
COMMD5-207ENST00000543949 NUTM2DQ5VT03 806 aaPredicted RBP29.9■■■□□ 2.38
COMMD5-207ENST00000543949 NBPF1Q3BBV0 1214 aa29.9■■■□□ 2.38
COMMD5-207ENST00000543949 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.9■■■□□ 2.38
COMMD5-207ENST00000543949 USP47Q96K76 1375 aa29.89■■■□□ 2.38
COMMD5-207ENST00000543949 HSPA5P11021 654 aaKnown RBP29.89■■■□□ 2.38
COMMD5-207ENST00000543949 TMEM2Q9UHN6 1383 aa29.88■■■□□ 2.37
COMMD5-207ENST00000543949 SETBP1Q9Y6X0 1596 aa29.86■■■□□ 2.37
COMMD5-207ENST00000543949 CFAP70Q5T0N1 1121 aa29.86■■■□□ 2.37
COMMD5-207ENST00000543949 THEMISQ8N1K5 641 aaPredicted RBP29.85■■■□□ 2.37
COMMD5-207ENST00000543949 SLIT1O75093 1534 aa29.84■■■□□ 2.37
COMMD5-207ENST00000543949 C14orf93Q9H972 538 aaKnown RBP29.84■■■□□ 2.37
COMMD5-207ENST00000543949 HIRIP3Q9BW71 556 aaPredicted RBP29.83■■■□□ 2.37
COMMD5-207ENST00000543949 IQGAP1P46940 1657 aa29.83■■■□□ 2.37
COMMD5-207ENST00000543949 ARHGAP23Q9P227 1491 aa29.81■■■□□ 2.36
COMMD5-207ENST00000543949 SCAF11Q99590 1463 aaKnown RBP29.78■■■□□ 2.36
COMMD5-207ENST00000543949 EID1Q9Y6B2 187 aa29.77■■■□□ 2.36
COMMD5-207ENST00000543949 ALKQ9UM73 1620 aa29.76■■■□□ 2.36
COMMD5-207ENST00000543949 ADGRB1O14514 1584 aa29.76■■■□□ 2.35
COMMD5-207ENST00000543949 KDM4FA0A1W2PPD8 638 aa29.76■■■□□ 2.35
COMMD5-207ENST00000543949 EIF3AQ14152 1382 aaKnown RBP29.73■■■□□ 2.35
COMMD5-207ENST00000543949 TXNDC2Q86VQ3 553 aa29.73■■■□□ 2.35
COMMD5-207ENST00000543949 NRXN3Q9Y4C0 1643 aa29.73■■■□□ 2.35
COMMD5-207ENST00000543949 POLR1AO95602 1720 aaPredicted RBP29.71■■■□□ 2.35
COMMD5-207ENST00000543949 SETD1AO15047 1707 aaKnown RBP29.71■■■□□ 2.35
COMMD5-207ENST00000543949 PLEKHG1Q9ULL1 1385 aa29.7■■■□□ 2.35
COMMD5-207ENST00000543949 ST20-MTHFSA0A0A6YYL1 179 aa29.7■■■□□ 2.35
COMMD5-207ENST00000543949 LTKP29376 864 aa29.69■■■□□ 2.34
COMMD5-207ENST00000543949 SENP3Q9H4L4 574 aaPredicted RBP29.69■■■□□ 2.34
COMMD5-207ENST00000543949 ASXL1Q8IXJ9 1541 aa29.68■■■□□ 2.34
COMMD5-207ENST00000543949 TMEM132EQ6IEE7 984 aa29.67■■■□□ 2.34
COMMD5-207ENST00000543949 BCANQ96GW7 911 aa29.66■■■□□ 2.34
COMMD5-207ENST00000543949 ANKLE2Q86XL3 938 aa29.61■■■□□ 2.33
COMMD5-207ENST00000543949 ARHGEF28Q8N1W1 1705 aaKnown RBP29.61■■■□□ 2.33
COMMD5-207ENST00000543949 YTHDC2Q9H6S0 1430 aaKnown RBP29.6■■■□□ 2.33
COMMD5-207ENST00000543949 TRAK1Q9UPV9 953 aa29.6■■■□□ 2.33
COMMD5-207ENST00000543949 ADAMTS13Q76LX8 1427 aa29.6■■■□□ 2.33
COMMD5-207ENST00000543949 DIP2AQ14689 1571 aa29.59■■■□□ 2.33
COMMD5-207ENST00000543949 DIEXFQ68CQ4 756 aaKnown RBP29.57■■■□□ 2.32
COMMD5-207ENST00000543949 WASHC2AQ641Q2 1341 aa29.57■■■□□ 2.32
COMMD5-207ENST00000543949 CCDC7Q96M83 1385 aa29.57■■■□□ 2.32
COMMD5-207ENST00000543949 TESK2Q96S53 571 aa29.56■■■□□ 2.32
COMMD5-207ENST00000543949 MED14O60244 1454 aa29.55■■■□□ 2.32
COMMD5-207ENST00000543949 QRICH2Q9H0J4 1663 aa29.55■■■□□ 2.32
COMMD5-207ENST00000543949 C11orf95C9JLR9 678 aaPredicted RBP29.54■■■□□ 2.32
COMMD5-207ENST00000543949 SLC24A1O60721 1099 aa29.54■■■□□ 2.32
COMMD5-207ENST00000543949 CENPJQ9HC77 1338 aaPredicted RBP29.54■■■□□ 2.32
COMMD5-207ENST00000543949 LRPPRCP42704 1394 aaKnown RBP29.54■■■□□ 2.32
COMMD5-207ENST00000543949 STK26Q9P289 416 aa29.53■■■□□ 2.32
COMMD5-207ENST00000543949 KIF7Q2M1P5 1343 aa29.53■■■□□ 2.32
COMMD5-207ENST00000543949 METP08581 1390 aa29.53■■■□□ 2.32
COMMD5-207ENST00000543949 KNDC1Q76NI1 1749 aa29.53■■■□□ 2.32
COMMD5-207ENST00000543949 DLC1Q96QB1 1528 aa29.52■■■□□ 2.32
COMMD5-207ENST00000543949 TMF1P82094 1093 aa29.52■■■□□ 2.32
COMMD5-207ENST00000543949 SBNO2Q9Y2G9 1366 aa29.51■■■□□ 2.31
COMMD5-207ENST00000543949 TBX22Q9Y458 520 aa29.51■■■□□ 2.31
COMMD5-207ENST00000543949 SLC26A8Q96RN1 970 aa29.49■■■□□ 2.31
COMMD5-207ENST00000543949 ABCC11Q96J66 1382 aa29.49■■■□□ 2.31
COMMD5-207ENST00000543949 DDX10Q13206 875 aaKnown RBP29.48■■■□□ 2.31
COMMD5-207ENST00000543949 NPHP4O75161 1426 aaPredicted RBP29.46■■■□□ 2.31
COMMD5-207ENST00000543949 DISP3Q9P2K9 1392 aa29.46■■■□□ 2.31
COMMD5-207ENST00000543949 LMTK3Q96Q04 1460 aa29.45■■■□□ 2.31
COMMD5-207ENST00000543949 CPS1P31327 1500 aa29.45■■■□□ 2.3
COMMD5-207ENST00000543949 TECPR2O15040 1411 aa29.44■■■□□ 2.3
COMMD5-207ENST00000543949 CDCA8Q53HL2 280 aa29.43■■■□□ 2.3
COMMD5-207ENST00000543949 POLR3GLQ9BT43 218 aa29.43■■■□□ 2.3
COMMD5-207ENST00000543949 PIK3R4Q99570 1358 aa29.43■■■□□ 2.3
COMMD5-207ENST00000543949 POGKQ9P215 609 aa29.42■■■□□ 2.3
COMMD5-207ENST00000543949 PRAM1Q96QH2 718 aa29.41■■■□□ 2.3
COMMD5-207ENST00000543949 NCKAP5LQ9HCH0 1330 aa29.4■■■□□ 2.3
COMMD5-207ENST00000543949 SIRT1Q96EB6 747 aa29.39■■■□□ 2.3
COMMD5-207ENST00000543949 FAM135BQ49AJ0 1406 aa29.39■■■□□ 2.3
COMMD5-207ENST00000543949 PTPRUQ92729 1446 aa29.37■■■□□ 2.29
COMMD5-207ENST00000543949 XRN1Q8IZH2 1706 aaKnown RBP29.36■■■□□ 2.29
COMMD5-207ENST00000543949 HSPA2P54652 639 aa29.35■■■□□ 2.29
COMMD5-207ENST00000543949 SAFB2Q14151 953 aaKnown RBP eCLIP29.35■■■□□ 2.29
COMMD5-207ENST00000543949 CHD2O14647 1828 aaKnown RBP29.35■■■□□ 2.29
COMMD5-207ENST00000543949 AMOTL2Q9Y2J4 779 aa29.34■■■□□ 2.29
COMMD5-207ENST00000543949 EVC2Q86UK5 1308 aa29.33■■■□□ 2.29
COMMD5-207ENST00000543949 PTCH1Q13635 1447 aa29.32■■■□□ 2.28
COMMD5-207ENST00000543949 TULP4Q9NRJ4 1543 aa29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms