RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 CHIC2Q9UKJ5 165 aa28.74■■■□□ 2.19
RAP1B-229ENST00000543393 ANKRD30AQ9BXX3 1397 aa28.74■■■□□ 2.19
RAP1B-229ENST00000543393 JCADQ9P266 1359 aa28.73■■■□□ 2.19
RAP1B-229ENST00000543393 SLC52A1Q9NWF4 448 aa28.72■■■□□ 2.19
RAP1B-229ENST00000543393 CHD2O14647 1828 aaKnown RBP28.69■■■□□ 2.18
RAP1B-229ENST00000543393 FGD6Q6ZV73 1430 aa28.69■■■□□ 2.18
RAP1B-229ENST00000543393 MYO5BQ9ULV0 1848 aa28.66■■■□□ 2.18
RAP1B-229ENST00000543393 COL16A1Q07092 1604 aaPredicted RBP28.65■■■□□ 2.18
RAP1B-229ENST00000543393 PLEKHG1Q9ULL1 1385 aa28.65■■■□□ 2.18
RAP1B-229ENST00000543393 ZFYVE9O95405 1425 aa28.65■■■□□ 2.18
RAP1B-229ENST00000543393 APLP2Q06481 763 aa28.62■■■□□ 2.17
RAP1B-229ENST00000543393 RPRD2Q5VT52 1461 aaKnown RBP28.61■■■□□ 2.17
RAP1B-229ENST00000543393 PPP1R15AO75807 674 aaPredicted RBP28.61■■■□□ 2.17
RAP1B-229ENST00000543393 GCC2Q8IWJ2 1684 aa28.61■■■□□ 2.17
RAP1B-229ENST00000543393 RIMS2Q9UQ26 1411 aa28.6■■■□□ 2.17
RAP1B-229ENST00000543393 LRP6O75581 1613 aa28.6■■■□□ 2.17
RAP1B-229ENST00000543393 HDGFP51858 240 aaKnown RBP28.58■■■□□ 2.17
RAP1B-229ENST00000543393 SPATA31A6Q5VVP1 1343 aa28.58■■■□□ 2.17
RAP1B-229ENST00000543393 NCOA3Q9Y6Q9 1424 aa28.58■■■□□ 2.17
RAP1B-229ENST00000543393 TMEM131LA2VDJ0 1609 aa28.58■■■□□ 2.17
RAP1B-229ENST00000543393 ADGRL2O95490 1459 aa28.57■■■□□ 2.16
RAP1B-229ENST00000543393 C14orf37Q86TY3 774 aa28.56■■■□□ 2.16
RAP1B-229ENST00000543393 TBX22Q9Y458 520 aa28.56■■■□□ 2.16
RAP1B-229ENST00000543393 MEX3CQ5U5Q3 659 aaKnown RBP28.55■■■□□ 2.16
RAP1B-229ENST00000543393 ZNF772Q68DY9 489 aaPredicted RBP28.53■■■□□ 2.16
RAP1B-229ENST00000543393 UPF1Q92900 1129 aaKnown RBP eCLIP28.53■■■□□ 2.16
RAP1B-229ENST00000543393 ANKRD50Q9ULJ7 1429 aa28.52■■■□□ 2.16
RAP1B-229ENST00000543393 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.52■■■□□ 2.16
RAP1B-229ENST00000543393 TRIM52Q96A61 297 aa28.52■■■□□ 2.16
RAP1B-229ENST00000543393 AHDC1Q5TGY3 1603 aaPredicted RBP28.51■■■□□ 2.15
RAP1B-229ENST00000543393 CADPS2Q86UW7 1296 aa28.51■■■□□ 2.15
RAP1B-229ENST00000543393 SHPRHQ149N8 1683 aa28.51■■■□□ 2.15
RAP1B-229ENST00000543393 ADAMTS13Q76LX8 1427 aa28.5■■■□□ 2.15
RAP1B-229ENST00000543393 CHGAP10645 457 aaKnown RBP28.49■■■□□ 2.15
RAP1B-229ENST00000543393 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.49■■■□□ 2.15
RAP1B-229ENST00000543393 C19orf44Q9H6X5 657 aa28.49■■■□□ 2.15
RAP1B-229ENST00000543393 ATF3P18847 181 aa28.48■■■□□ 2.15
RAP1B-229ENST00000543393 NUTM2DQ5VT03 806 aaPredicted RBP28.48■■■□□ 2.15
RAP1B-229ENST00000543393 DIP2AQ14689 1571 aa28.45■■■□□ 2.15
RAP1B-229ENST00000543393 FAM50AQ14320 339 aaKnown RBP28.44■■■□□ 2.14
RAP1B-229ENST00000543393 PIK3R4Q99570 1358 aa28.44■■■□□ 2.14
RAP1B-229ENST00000543393 RXRBP28702 533 aa28.41■■■□□ 2.14
RAP1B-229ENST00000543393 E9PCH4 1651 aa28.41■■■□□ 2.14
RAP1B-229ENST00000543393 BRINP3Q76B58 766 aa28.4■■■□□ 2.14
RAP1B-229ENST00000543393 UNC13BO14795 1591 aa28.4■■■□□ 2.14
RAP1B-229ENST00000543393 NUTM2BA6NNL0 878 aaPredicted RBP28.39■■■□□ 2.14
RAP1B-229ENST00000543393 NUTM2EB1AL46 878 aaPredicted RBP28.39■■■□□ 2.14
RAP1B-229ENST00000543393 NUTM2AQ8IVF1 878 aaPredicted RBP28.39■■■□□ 2.14
RAP1B-229ENST00000543393 TRPM2O94759 1503 aa28.38■■■□□ 2.13
RAP1B-229ENST00000543393 AMOTL2Q9Y2J4 779 aa28.38■■■□□ 2.13
RAP1B-229ENST00000543393 PTPRUQ92729 1446 aa28.37■■■□□ 2.13
RAP1B-229ENST00000543393 CDK12Q9NYV4 1490 aaPredicted RBP28.34■■■□□ 2.13
RAP1B-229ENST00000543393 DCCP43146 1447 aa28.33■■■□□ 2.13
RAP1B-229ENST00000543393 AFF2P51816 1311 aa28.32■■■□□ 2.12
RAP1B-229ENST00000543393 ASXL1Q8IXJ9 1541 aa28.32■■■□□ 2.12
RAP1B-229ENST00000543393 SETD5Q9C0A6 1442 aa28.3■■■□□ 2.12
RAP1B-229ENST00000543393 IQGAP3Q86VI3 1631 aa28.29■■■□□ 2.12
RAP1B-229ENST00000543393 NHSL1Q5SYE7 1610 aa28.28■■■□□ 2.12
RAP1B-229ENST00000543393 MST1RQ04912 1400 aa28.27■■■□□ 2.12
RAP1B-229ENST00000543393 XRN1Q8IZH2 1706 aaKnown RBP28.27■■■□□ 2.12
RAP1B-229ENST00000543393 NRXN3Q9Y4C0 1643 aa28.25■■■□□ 2.11
RAP1B-229ENST00000543393 LRRC59Q96AG4 307 aaKnown RBP28.24■■■□□ 2.11
RAP1B-229ENST00000543393 C8orf37Q96NL8 207 aa28.22■■■□□ 2.11
RAP1B-229ENST00000543393 SETBP1Q9Y6X0 1596 aa28.22■■■□□ 2.11
RAP1B-229ENST00000543393 RGS12O14924 1447 aa28.21■■■□□ 2.11
RAP1B-229ENST00000543393 NUP155O75694 1391 aa28.21■■■□□ 2.11
RAP1B-229ENST00000543393 DDX17Q92841 729 aaKnown RBP28.2■■■□□ 2.1
RAP1B-229ENST00000543393 QTRT2Q9H974 415 aaKnown RBP28.2■■■□□ 2.1
RAP1B-229ENST00000543393 ROCK1Q13464 1354 aa28.2■■■□□ 2.1
RAP1B-229ENST00000543393 RBM6P78332 1123 aaKnown RBP28.19■■■□□ 2.1
RAP1B-229ENST00000543393 METP08581 1390 aa28.18■■■□□ 2.1
RAP1B-229ENST00000543393 PNPLA6Q8IY17 1366 aa28.18■■■□□ 2.1
RAP1B-229ENST00000543393 ADGRL3Q9HAR2 1447 aa28.15■■■□□ 2.1
RAP1B-229ENST00000543393 ZNF326Q5BKZ1 582 aaKnown RBP28.14■■■□□ 2.1
RAP1B-229ENST00000543393 NALCNQ8IZF0 1738 aa28.13■■■□□ 2.09
RAP1B-229ENST00000543393 SPHKAPQ2M3C7 1700 aa28.12■■■□□ 2.09
RAP1B-229ENST00000543393 SRCAPQ6ZRS2 3230 aa28.1■■■□□ 2.09
RAP1B-229ENST00000543393 NGLY1Q96IV0 654 aa28.1■■■□□ 2.09
RAP1B-229ENST00000543393 ADAMTS2O95450 1211 aa28.09■■■□□ 2.09
RAP1B-229ENST00000543393 C1orf167Q5SNV9 1468 aa28.06■■■□□ 2.08
RAP1B-229ENST00000543393 ITGAEP38570 1179 aa28.04■■■□□ 2.08
RAP1B-229ENST00000543393 NEXMIFQ5QGS0 1516 aa28.03■■■□□ 2.08
RAP1B-229ENST00000543393 LAMC1P11047 1609 aa28.03■■■□□ 2.08
RAP1B-229ENST00000543393 ATAD2Q6PL18 1390 aa28.01■■■□□ 2.07
RAP1B-229ENST00000543393 SOS2Q07890 1332 aaPredicted RBP28■■■□□ 2.07
RAP1B-229ENST00000543393 USP21Q9UK80 565 aa28■■■□□ 2.07
RAP1B-229ENST00000543393 CLTCL1P53675 1640 aa28■■■□□ 2.07
RAP1B-229ENST00000543393 ORAI2Q96SN7 254 aa27.99■■■□□ 2.07
RAP1B-229ENST00000543393 TRPC5Q9UL62 973 aaPredicted RBP27.97■■■□□ 2.07
RAP1B-229ENST00000543393 PTCH1Q13635 1447 aa27.95■■■□□ 2.07
RAP1B-229ENST00000543393 FNBP4Q8N3X1 1017 aaPredicted RBP27.95■■■□□ 2.06
RAP1B-229ENST00000543393 KIF1BO60333 1816 aa27.95■■■□□ 2.06
RAP1B-229ENST00000543393 ROBO2Q9HCK4 1378 aa27.94■■■□□ 2.06
RAP1B-229ENST00000543393 ATRNO75882 1429 aa27.92■■■□□ 2.06
RAP1B-229ENST00000543393 COL22A1Q8NFW1 1626 aaPredicted RBP27.91■■■□□ 2.06
RAP1B-229ENST00000543393 EP400Q96L91 3159 aa27.91■■■□□ 2.06
RAP1B-229ENST00000543393 ZRANB1Q9UGI0 708 aa27.89■■■□□ 2.06
RAP1B-229ENST00000543393 FOXD1Q16676 465 aa27.88■■■□□ 2.05
RAP1B-229ENST00000543393 VGFO15240 615 aaPredicted RBP27.87■■■□□ 2.05
RAP1B-229ENST00000543393 PRAG1Q86YV5 1406 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms