RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 MYO5CQ9NQX4 1742 aa30.63■■■□□ 2.49
SHD-201ENST00000543264 RSPH4AQ5TD94 716 aa30.62■■■□□ 2.49
SHD-201ENST00000543264 EIF2AK4Q9P2K8 1649 aaKnown RBP30.62■■■□□ 2.49
SHD-201ENST00000543264 USP19O94966 1318 aa30.62■■■□□ 2.49
SHD-201ENST00000543264 EIF3AQ14152 1382 aaKnown RBP30.61■■■□□ 2.49
SHD-201ENST00000543264 FAM43AQ8N2R8 423 aa30.61■■■□□ 2.49
SHD-201ENST00000543264 SYNJ2O15056 1496 aa30.6■■■□□ 2.49
SHD-201ENST00000543264 SEC24BO95487 1268 aa30.6■■■□□ 2.49
SHD-201ENST00000543264 POGKQ9P215 609 aa30.59■■■□□ 2.49
SHD-201ENST00000543264 SAMD9LQ8IVG5 1584 aa30.59■■■□□ 2.49
SHD-201ENST00000543264 NUP160Q12769 1436 aa30.58■■■□□ 2.49
SHD-201ENST00000543264 NKTRP30414 1462 aaKnown RBP30.57■■■□□ 2.48
SHD-201ENST00000543264 SLKQ9H2G2 1235 aaPredicted RBP30.56■■■□□ 2.48
SHD-201ENST00000543264 BECN1Q14457 450 aa30.53■■■□□ 2.48
SHD-201ENST00000543264 E9PSI1 815 aa30.53■■■□□ 2.48
SHD-201ENST00000543264 CLASP1Q7Z460 1538 aa30.52■■■□□ 2.48
SHD-201ENST00000543264 CDCA8Q53HL2 280 aa30.52■■■□□ 2.48
SHD-201ENST00000543264 DMRT2Q9Y5R5 561 aa30.52■■■□□ 2.48
SHD-201ENST00000543264 UNC13BO14795 1591 aa30.52■■■□□ 2.48
SHD-201ENST00000543264 CDC42BPBQ9Y5S2 1711 aa30.51■■■□□ 2.47
SHD-201ENST00000543264 PIK3C2GO75747 1445 aa30.51■■■□□ 2.47
SHD-201ENST00000543264 UBE2Q2Q8WVN8 375 aa30.51■■■□□ 2.47
SHD-201ENST00000543264 CANXP27824 592 aaKnown RBP30.5■■■□□ 2.47
SHD-201ENST00000543264 RSPH6AQ9H0K4 717 aa30.5■■■□□ 2.47
SHD-201ENST00000543264 COG6Q9Y2V7 657 aa30.5■■■□□ 2.47
SHD-201ENST00000543264 PANK1Q8TE04 598 aa30.49■■■□□ 2.47
SHD-201ENST00000543264 ASXL1Q8IXJ9 1541 aa30.49■■■□□ 2.47
SHD-201ENST00000543264 CGNL1Q0VF96 1302 aa30.49■■■□□ 2.47
SHD-201ENST00000543264 CLUAP1Q96AJ1 413 aa30.48■■■□□ 2.47
SHD-201ENST00000543264 MAPK8IP3Q9UPT6 1336 aa30.47■■■□□ 2.47
SHD-201ENST00000543264 SYCP2Q9BX26 1530 aa30.47■■■□□ 2.47
SHD-201ENST00000543264 PDE3AQ14432 1141 aa30.46■■■□□ 2.47
SHD-201ENST00000543264 RNF17Q9BXT8 1623 aaKnown RBP30.45■■■□□ 2.46
SHD-201ENST00000543264 IQGAP3Q86VI3 1631 aa30.44■■■□□ 2.46
SHD-201ENST00000543264 VIRMAQ69YN4 1812 aaKnown RBP30.44■■■□□ 2.46
SHD-201ENST00000543264 CENPJQ9HC77 1338 aaPredicted RBP30.43■■■□□ 2.46
SHD-201ENST00000543264 PREX2Q70Z35 1606 aa30.43■■■□□ 2.46
SHD-201ENST00000543264 ATP10AO60312 1499 aa30.41■■■□□ 2.46
SHD-201ENST00000543264 SYNMO15061 1565 aa30.4■■■□□ 2.46
SHD-201ENST00000543264 ABCC2Q92887 1545 aa30.39■■■□□ 2.46
SHD-201ENST00000543264 ARHGAP5Q13017 1502 aa30.38■■■□□ 2.45
SHD-201ENST00000543264 L1TD1Q5T7N2 865 aaKnown RBP30.37■■■□□ 2.45
SHD-201ENST00000543264 ARXQ96QS3 562 aa30.37■■■□□ 2.45
SHD-201ENST00000543264 ANTXR1Q9H6X2 564 aa30.37■■■□□ 2.45
SHD-201ENST00000543264 NPC1L1Q9UHC9 1359 aa30.36■■■□□ 2.45
SHD-201ENST00000543264 UPF2Q9HAU5 1272 aaKnown RBP30.36■■■□□ 2.45
SHD-201ENST00000543264 RRAGDQ9NQL2 400 aaPredicted RBP30.36■■■□□ 2.45
SHD-201ENST00000543264 IQGAP1P46940 1657 aa30.35■■■□□ 2.45
SHD-201ENST00000543264 SCAF11Q99590 1463 aaKnown RBP30.35■■■□□ 2.45
SHD-201ENST00000543264 MAST1Q9Y2H9 1570 aa30.35■■■□□ 2.45
SHD-201ENST00000543264 WWC1Q8IX03 1113 aa30.34■■■□□ 2.45
SHD-201ENST00000543264 NLRP1Q9C000 1473 aa30.33■■■□□ 2.45
SHD-201ENST00000543264 NEUROD2Q15784 382 aa30.33■■■□□ 2.45
SHD-201ENST00000543264 MADDQ8WXG6 1647 aa30.32■■■□□ 2.44
SHD-201ENST00000543264 TBC1D2Q9BYX2 928 aa30.31■■■□□ 2.44
SHD-201ENST00000543264 NGEFQ8N5V2 710 aa30.31■■■□□ 2.44
SHD-201ENST00000543264 SPRYD3Q8NCJ5 442 aa30.31■■■□□ 2.44
SHD-201ENST00000543264 NINLQ9Y2I6 1382 aa30.31■■■□□ 2.44
SHD-201ENST00000543264 PMFBP1Q8TBY8 1022 aa30.3■■■□□ 2.44
SHD-201ENST00000543264 TBC1D32Q96NH3 1257 aa30.3■■■□□ 2.44
SHD-201ENST00000543264 PCDHB15Q9Y5E8 787 aa30.3■■■□□ 2.44
SHD-201ENST00000543264 DUOX2Q9NRD8 1548 aa30.28■■■□□ 2.44
SHD-201ENST00000543264 PDZRN3Q9UPQ7 1066 aa30.28■■■□□ 2.44
SHD-201ENST00000543264 TNNQ9UQP3 1299 aa30.27■■■□□ 2.44
SHD-201ENST00000543264 MYOM1P52179 1685 aa30.27■■■□□ 2.44
SHD-201ENST00000543264 CARD14Q9BXL6 1004 aa30.27■■■□□ 2.44
SHD-201ENST00000543264 RRP7AQ9Y3A4 280 aaKnown RBP30.26■■■□□ 2.44
SHD-201ENST00000543264 PLXNC1O60486 1568 aa30.26■■■□□ 2.44
SHD-201ENST00000543264 RARSP54136 660 aaKnown RBP30.25■■■□□ 2.43
SHD-201ENST00000543264 TTC37Q6PGP7 1564 aa30.25■■■□□ 2.43
SHD-201ENST00000543264 RLBP1P12271 317 aa30.24■■■□□ 2.43
SHD-201ENST00000543264 BCL2L13Q9BXK5 485 aa30.24■■■□□ 2.43
SHD-201ENST00000543264 GZF1Q9H116 711 aaPredicted RBP30.23■■■□□ 2.43
SHD-201ENST00000543264 SCAPERQ9BY12 1400 aa30.23■■■□□ 2.43
SHD-201ENST00000543264 XRCC6P12956 609 aaKnown RBP eCLIP30.22■■■□□ 2.43
SHD-201ENST00000543264 GOLGA6L3A6NEY3 463 aa30.21■■■□□ 2.43
SHD-201ENST00000543264 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.2■■■□□ 2.42
SHD-201ENST00000543264 KDM5AP29375 1690 aaKnown RBP30.18■■■□□ 2.42
SHD-201ENST00000543264 MCM4P33991 863 aa30.18■■■□□ 2.42
SHD-201ENST00000543264 TNNT2P45379 298 aaPredicted RBP30.18■■■□□ 2.42
SHD-201ENST00000543264 STAC3Q96MF2 364 aa30.17■■■□□ 2.42
SHD-201ENST00000543264 RWDD1Q9H446 243 aaPredicted RBP30.17■■■□□ 2.42
SHD-201ENST00000543264 AAMPQ13685 434 aa30.16■■■□□ 2.42
SHD-201ENST00000543264 CFAP70Q5T0N1 1121 aa30.15■■■□□ 2.42
SHD-201ENST00000543264 SPHKAPQ2M3C7 1700 aa30.15■■■□□ 2.42
SHD-201ENST00000543264 TCP11L2Q8N4U5 519 aa30.14■■■□□ 2.42
SHD-201ENST00000543264 PANK2Q9BZ23 570 aa30.14■■■□□ 2.42
SHD-201ENST00000543264 POLR3AO14802 1390 aaPredicted RBP30.14■■■□□ 2.42
SHD-201ENST00000543264 RUNDC1Q96C34 613 aa30.13■■■□□ 2.41
SHD-201ENST00000543264 FSD2A1L4K1 749 aa30.12■■■□□ 2.41
SHD-201ENST00000543264 ERVK-7P63135 1459 aa30.11■■■□□ 2.41
SHD-201ENST00000543264 MORC1Q86VD1 984 aa30.1■■■□□ 2.41
SHD-201ENST00000543264 CEP152O94986 1710 aa30.1■■■□□ 2.41
SHD-201ENST00000543264 ZMYM3Q14202 1370 aa30.09■■■□□ 2.41
SHD-201ENST00000543264 MFAP1P55081 439 aaKnown RBP30.09■■■□□ 2.41
SHD-201ENST00000543264 C22orf23Q9BZE7 217 aa30.09■■■□□ 2.41
SHD-201ENST00000543264 SLC24A1O60721 1099 aa30.08■■■□□ 2.41
SHD-201ENST00000543264 TRPM2O94759 1503 aa30.08■■■□□ 2.41
SHD-201ENST00000543264 CHMP5Q9NZZ3 219 aa30.08■■■□□ 2.41
SHD-201ENST00000543264 TRAK2O60296 914 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms