RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.42□□□□□ -1.06
LDHB-209ENST00000542765 GPIHBP1Q8IV16 184 aa8.42□□□□□ -1.06
LDHB-209ENST00000542765 KCNC4Q03721 635 aa8.41□□□□□ -1.06
LDHB-209ENST00000542765 NECTIN2Q92692 538 aa8.41□□□□□ -1.06
LDHB-209ENST00000542765 RGS20O76081 388 aa8.4□□□□□ -1.06
LDHB-209ENST00000542765 PHOX2BQ99453 314 aa8.4□□□□□ -1.06
LDHB-209ENST00000542765 SLC10A3P09131 477 aa8.39□□□□□ -1.07
LDHB-209ENST00000542765 MTRQ99707 1265 aa8.39□□□□□ -1.07
LDHB-209ENST00000542765 RNF40O75150 1001 aa8.37□□□□□ -1.07
LDHB-209ENST00000542765 IL21Q9HBE4 155 aa8.37□□□□□ -1.07
LDHB-209ENST00000542765 ZNF516Q92618 1163 aa8.36□□□□□ -1.07
LDHB-209ENST00000542765 ACTN4O43707 911 aaKnown RBP8.35□□□□□ -1.07
LDHB-209ENST00000542765 SLC4A3P48751 1232 aa8.35□□□□□ -1.07
LDHB-209ENST00000542765 MAP2K5Q13163 448 aa8.35□□□□□ -1.07
LDHB-209ENST00000542765 DAXXQ9UER7 740 aaPredicted RBP8.35□□□□□ -1.07
LDHB-209ENST00000542765 TULP1O00294 542 aaPredicted RBP8.34□□□□□ -1.07
LDHB-209ENST00000542765 PRR14Q9BWN1 585 aa8.34□□□□□ -1.07
LDHB-209ENST00000542765 IRF6O14896 467 aa8.33□□□□□ -1.08
LDHB-209ENST00000542765 MINK1Q8N4C8 1332 aaPredicted RBP8.32□□□□□ -1.08
LDHB-209ENST00000542765 LMOD2Q6P5Q4 547 aa8.32□□□□□ -1.08
LDHB-209ENST00000542765 NLRP7Q8WX94 980 aa8.32□□□□□ -1.08
LDHB-209ENST00000542765 CFHP08603 1231 aa8.31□□□□□ -1.08
LDHB-209ENST00000542765 ZPR1O75312 459 aa8.3□□□□□ -1.08
LDHB-209ENST00000542765 BLOC1S3Q6QNY0 202 aa8.3□□□□□ -1.08
LDHB-209ENST00000542765 NKX2-3Q8TAU0 364 aa8.3□□□□□ -1.08
LDHB-209ENST00000542765 COPS2P61201 443 aa8.29□□□□□ -1.08
LDHB-209ENST00000542765 KMT5BQ4FZB7 885 aa8.29□□□□□ -1.08
LDHB-209ENST00000542765 PCDHB3Q9Y5E6 796 aa8.29□□□□□ -1.08
LDHB-209ENST00000542765 ZMYND10O75800 440 aa8.28□□□□□ -1.08
LDHB-209ENST00000542765 PPP1R18Q6NYC8 613 aa8.27□□□□□ -1.09
LDHB-209ENST00000542765 BARGINQ6ZT62 677 aa8.27□□□□□ -1.09
LDHB-209ENST00000542765 CCDC102AQ96A19 550 aa8.27□□□□□ -1.09
LDHB-209ENST00000542765 TMUB1Q9BVT8 246 aa8.27□□□□□ -1.09
LDHB-209ENST00000542765 GCGRP47871 477 aa8.26□□□□□ -1.09
LDHB-209ENST00000542765 ZC3H15Q8WU90 426 aaKnown RBP8.26□□□□□ -1.09
LDHB-209ENST00000542765 RSPH4AQ5TD94 716 aa8.25□□□□□ -1.09
LDHB-209ENST00000542765 DDX11L8A8MPP1 907 aa8.24□□□□□ -1.09
LDHB-209ENST00000542765 SULF1Q8IWU6 871 aa8.24□□□□□ -1.09
LDHB-209ENST00000542765 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.24□□□□□ -1.09
LDHB-209ENST00000542765 CD46P15529 392 aa8.23□□□□□ -1.09
LDHB-209ENST00000542765 SCUBE3Q8IX30 993 aa8.23□□□□□ -1.09
LDHB-209ENST00000542765 MORN1Q5T089 497 aa8.22□□□□□ -1.09
LDHB-209ENST00000542765 TLL1O43897 1013 aa8.21□□□□□ -1.1
LDHB-209ENST00000542765 NR1I2O75469 434 aa8.21□□□□□ -1.1
LDHB-209ENST00000542765 FUT2Q10981 343 aa8.21□□□□□ -1.1
LDHB-209ENST00000542765 PUS10Q3MIT2 529 aaKnown RBP8.21□□□□□ -1.1
LDHB-209ENST00000542765 RDH13Q8NBN7 331 aa8.21□□□□□ -1.1
LDHB-209ENST00000542765 THAP11Q96EK4 314 aa8.21□□□□□ -1.1
LDHB-209ENST00000542765 MDM2Q00987 491 aaPredicted RBP8.2□□□□□ -1.1
LDHB-209ENST00000542765 REPIN1Q9BWE0 567 aaKnown RBP8.2□□□□□ -1.1
LDHB-209ENST00000542765 ADH1BP00325 375 aa8.19□□□□□ -1.1
LDHB-209ENST00000542765 ATP6V1AP38606 617 aa8.19□□□□□ -1.1
LDHB-209ENST00000542765 EMID1Q96A84 441 aaPredicted RBP8.19□□□□□ -1.1
LDHB-209ENST00000542765 GPCPD1Q9NPB8 672 aa8.19□□□□□ -1.1
LDHB-209ENST00000542765 V9GY48 417 aaPredicted RBP8.19□□□□□ -1.1
LDHB-209ENST00000542765 RNF223E7ERA6 249 aa8.18□□□□□ -1.1
LDHB-209ENST00000542765 CLCN1P35523 988 aa8.18□□□□□ -1.1
LDHB-209ENST00000542765 FAM217BQ9NTX9 383 aaPredicted RBP8.18□□□□□ -1.1
LDHB-209ENST00000542765 SALL2Q9Y467 1007 aaPredicted RBP8.18□□□□□ -1.1
LDHB-209ENST00000542765 AMHR2Q16671 573 aa8.17□□□□□ -1.1
LDHB-209ENST00000542765 SLC27A5Q9Y2P5 690 aa8.17□□□□□ -1.1
LDHB-209ENST00000542765 GGCXP38435 758 aa8.16□□□□□ -1.1
LDHB-209ENST00000542765 PRKD2Q9BZL6 878 aa8.16□□□□□ -1.1
LDHB-209ENST00000542765 S1PR4O95977 384 aa8.15□□□□□ -1.1
LDHB-209ENST00000542765 TPRNQ4KMQ1 711 aa8.15□□□□□ -1.1
LDHB-209ENST00000542765 BRICD5Q6PL45 260 aa8.15□□□□□ -1.1
LDHB-209ENST00000542765 IRX2Q9BZI1 471 aaPredicted RBP8.15□□□□□ -1.1
LDHB-209ENST00000542765 KDM4AO75164 1064 aa8.14□□□□□ -1.11
LDHB-209ENST00000542765 FAM160A2Q8N612 972 aaPredicted RBP8.14□□□□□ -1.11
LDHB-209ENST00000542765 KRI1Q8N9T8 703 aaKnown RBP8.14□□□□□ -1.11
LDHB-209ENST00000542765 ANKLE1Q8NAG6 615 aa8.14□□□□□ -1.11
LDHB-209ENST00000542765 SPSB2Q99619 263 aa8.14□□□□□ -1.11
LDHB-209ENST00000542765 PPEF1O14829 653 aaPredicted RBP8.12□□□□□ -1.11
LDHB-209ENST00000542765 USP46P62068 366 aa8.12□□□□□ -1.11
LDHB-209ENST00000542765 SLC6A16Q9GZN6 736 aa8.12□□□□□ -1.11
LDHB-209ENST00000542765 TRIM66O15016 1216 aa8.11□□□□□ -1.11
LDHB-209ENST00000542765 FMNL1O95466 1100 aaPredicted RBP8.11□□□□□ -1.11
LDHB-209ENST00000542765 GRIPAP1Q4V328 841 aa8.11□□□□□ -1.11
LDHB-209ENST00000542765 RNF19BQ6ZMZ0 732 aa8.11□□□□□ -1.11
LDHB-209ENST00000542765 HOXA2O43364 376 aa8.1□□□□□ -1.11
LDHB-209ENST00000542765 PRKCSHP14314 528 aaPredicted RBP8.1□□□□□ -1.11
LDHB-209ENST00000542765 SSTR3P32745 418 aaPredicted RBP8.1□□□□□ -1.11
LDHB-209ENST00000542765 PLA2G2CQ5R387 149 aa8.1□□□□□ -1.11
LDHB-209ENST00000542765 MSS51Q4VC12 460 aa8.09□□□□□ -1.11
LDHB-209ENST00000542765 LIAT1Q6ZQX7 453 aa8.09□□□□□ -1.11
LDHB-209ENST00000542765 HLA-CQ95604 372 aa8.09□□□□□ -1.11
LDHB-209ENST00000542765 AK7Q96M32 723 aa8.09□□□□□ -1.11
LDHB-209ENST00000542765 SLC19A1P41440 591 aa8.08□□□□□ -1.12
LDHB-209ENST00000542765 TRIM67Q6ZTA4 783 aa8.08□□□□□ -1.12
LDHB-209ENST00000542765 PARP9Q8IXQ6 854 aa8.08□□□□□ -1.12
LDHB-209ENST00000542765 SPRYD7Q5W111 196 aa8.07□□□□□ -1.12
LDHB-209ENST00000542765 GIGYF2Q6Y7W6 1299 aaKnown RBP8.07□□□□□ -1.12
LDHB-209ENST00000542765 SLC24A3Q9HC58 644 aa8.07□□□□□ -1.12
LDHB-209ENST00000542765 MMP16P51512 607 aa8.06□□□□□ -1.12
LDHB-209ENST00000542765 Q3C1V9 767 aa8.06□□□□□ -1.12
LDHB-209ENST00000542765 SPIRE2Q8WWL2 714 aa8.06□□□□□ -1.12
LDHB-209ENST00000542765 PRDM9Q9NQV7 894 aa8.06□□□□□ -1.12
LDHB-209ENST00000542765 LCE2BO14633 110 aa8.05□□□□□ -1.12
LDHB-209ENST00000542765 TTLL12Q14166 644 aaPredicted RBP8.05□□□□□ -1.12
LDHB-209ENST00000542765 LAPTM4AQ15012 233 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms